RNA–Protein interactions for RNA: ENSMUST00000033878.13

Rab11fip1-201, Transcript of Rab11 family-interacting protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rab11fip1, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip1-201ENSMUST00000033878 NischQ80TM9 1593 aa23.62■■□□□ 1.37
Rab11fip1-201ENSMUST00000033878 Rhox8Q6VSS7 320 aa23.14■■□□□ 1.29
Rab11fip1-201ENSMUST00000033878 Abcc9P70170 1546 aa22.68■■□□□ 1.22
Rab11fip1-201ENSMUST00000033878 Gm35339A0A140LHH9 1649 aa22.51■■□□□ 1.19
Rab11fip1-201ENSMUST00000033878 Abcc8B2RUS7 1588 aa22.29■■□□□ 1.16
Rab11fip1-201ENSMUST00000033878 Ehmt2Q9Z148 1263 aaKnown RBP22.01■■□□□ 1.11
Rab11fip1-201ENSMUST00000033878 Rpgrip1Q9EPQ2 1331 aa21.52■■□□□ 1.04
Rab11fip1-201ENSMUST00000033878 Ccdc136Q3TVA9 1136 aa21.5■■□□□ 1.03
Rab11fip1-201ENSMUST00000033878 Acin1Q9JIX8 1338 aaKnown RBP21.2■□□□□ 0.98
Rab11fip1-201ENSMUST00000033878 Pcgf6Q99NA9 353 aa21.05■□□□□ 0.96
Rab11fip1-201ENSMUST00000033878 Ccdc180J3QNE4 1664 aa21■□□□□ 0.95
Rab11fip1-201ENSMUST00000033878 Rtl1Q7M732 1744 aa20.88■□□□□ 0.93
Rab11fip1-201ENSMUST00000033878 ScribQ80U72 1612 aa20.85■□□□□ 0.93
Rab11fip1-201ENSMUST00000033878 Trim41Q5NCC3 630 aa20.73■□□□□ 0.91
Rab11fip1-201ENSMUST00000033878 Rb1cc1Q9ESK9 1588 aa20.71■□□□□ 0.91
Rab11fip1-201ENSMUST00000033878 Supt5hO55201 1082 aaKnown RBP20.65■□□□□ 0.9
Rab11fip1-201ENSMUST00000033878 Gab3Q8BSM5 595 aa20.62■□□□□ 0.89
Rab11fip1-201ENSMUST00000033878 Zcchc6Q5BLK4 1491 aaKnown RBP20.61■□□□□ 0.89
Rab11fip1-201ENSMUST00000033878 Kdm5dQ62240 1548 aa20.56■□□□□ 0.88
Rab11fip1-201ENSMUST00000033878 Zeb1Q64318 1117 aa20.48■□□□□ 0.87
Rab11fip1-201ENSMUST00000033878 Cngb1E1AZ71 1325 aa20.43■□□□□ 0.86
Rab11fip1-201ENSMUST00000033878 HrcG5E8J6 738 aa20.41■□□□□ 0.86
Rab11fip1-201ENSMUST00000033878 Dcaf1Q80TR8 1506 aa20.36■□□□□ 0.85
Rab11fip1-201ENSMUST00000033878 Neurod1Q60867 357 aa20.34■□□□□ 0.85
Rab11fip1-201ENSMUST00000033878 Baz1aO88379 1555 aa20.29■□□□□ 0.84
Rab11fip1-201ENSMUST00000033878 NacadQ5SWP3 1504 aa20.25■□□□□ 0.83
Rab11fip1-201ENSMUST00000033878 Chic1Q8CBW7 227 aa20.13■□□□□ 0.81
Rab11fip1-201ENSMUST00000033878 Esf1Q3V1V3 845 aaKnown RBP20.04■□□□□ 0.8
Rab11fip1-201ENSMUST00000033878 Ppargc1bQ8VHJ7 1014 aa20.02■□□□□ 0.8
Rab11fip1-201ENSMUST00000033878 Sall2Q9QX96 1004 aa19.87■□□□□ 0.77
Rab11fip1-201ENSMUST00000033878 Wdr66E9Q743 1299 aa19.84■□□□□ 0.77
Rab11fip1-201ENSMUST00000033878 Las1lA2BE28 776 aaKnown RBP19.83■□□□□ 0.77
Rab11fip1-201ENSMUST00000033878 Sycp2Q9CUU3 1500 aa19.82■□□□□ 0.76
Rab11fip1-201ENSMUST00000033878 Cecr2E9Q2Z1 1453 aa19.81■□□□□ 0.76
Rab11fip1-201ENSMUST00000033878 UbtfP25976 765 aaKnown RBP19.81■□□□□ 0.76
Rab11fip1-201ENSMUST00000033878 Mier1Q5UAK0 511 aa19.8■□□□□ 0.76
Rab11fip1-201ENSMUST00000033878 Csrnp3P59055 597 aa19.8■□□□□ 0.76
Rab11fip1-201ENSMUST00000033878 Smarca2Q6DIC0 1577 aa19.78■□□□□ 0.76
Rab11fip1-201ENSMUST00000033878 Myt1lP97500 1187 aa19.76■□□□□ 0.75
Rab11fip1-201ENSMUST00000033878 1700123L14RikQ3V2K7 440 aa19.72■□□□□ 0.75
Rab11fip1-201ENSMUST00000033878 Gm38655A0A286YDK6 273 aa19.72■□□□□ 0.75
Rab11fip1-201ENSMUST00000033878 Rsf1E9PWW9 1441 aaKnown RBP19.66■□□□□ 0.74
Rab11fip1-201ENSMUST00000033878 Cep164Q5DU05 1446 aa19.65■□□□□ 0.74
Rab11fip1-201ENSMUST00000033878 NefmP08553 848 aa19.6■□□□□ 0.73
Rab11fip1-201ENSMUST00000033878 Ccdc88bQ4QRL3 1481 aa19.58■□□□□ 0.72
Rab11fip1-201ENSMUST00000033878 Brd4Q9ESU6 1400 aaKnown RBP19.54■□□□□ 0.72
Rab11fip1-201ENSMUST00000033878 Crybg2B7ZCC2 1516 aa19.51■□□□□ 0.71
Rab11fip1-201ENSMUST00000033878 Aebp2Q9Z248 504 aaKnown RBP19.47■□□□□ 0.71
Rab11fip1-201ENSMUST00000033878 BicraF8VPZ9 1578 aa19.46■□□□□ 0.71
Rab11fip1-201ENSMUST00000033878 Synj1Q8CHC4 1574 aa19.45■□□□□ 0.7
Rab11fip1-201ENSMUST00000033878 Anks4bQ8K3X6 423 aa19.44■□□□□ 0.7
Rab11fip1-201ENSMUST00000033878 Cdk11bP24788 784 aaKnown RBP19.4■□□□□ 0.7
Rab11fip1-201ENSMUST00000033878 Nop58Q6DFW4 536 aaKnown RBP19.38■□□□□ 0.69
Rab11fip1-201ENSMUST00000033878 Golga3P55937 1487 aa19.37■□□□□ 0.69
Rab11fip1-201ENSMUST00000033878 Npm2Q80W85 207 aa19.36■□□□□ 0.69
Rab11fip1-201ENSMUST00000033878 Il27Q8K3I6 234 aa19.32■□□□□ 0.68
Rab11fip1-201ENSMUST00000033878 Plekhg3Q4VAC9 1341 aa19.3■□□□□ 0.68
Rab11fip1-201ENSMUST00000033878 CftrP26361 1476 aa19.28■□□□□ 0.68
Rab11fip1-201ENSMUST00000033878 Ap3b1Q9Z1T1 1105 aa19.27■□□□□ 0.68
Rab11fip1-201ENSMUST00000033878 CenpbP27790 599 aa19.25■□□□□ 0.67
Rab11fip1-201ENSMUST00000033878 Mapk8ip2Q9ERE9 830 aa19.17■□□□□ 0.66
Rab11fip1-201ENSMUST00000033878 Eid3Q3V124 375 aa19.15■□□□□ 0.66
Rab11fip1-201ENSMUST00000033878 Aplp2Q06335 707 aa19.04■□□□□ 0.64
Rab11fip1-201ENSMUST00000033878 ClspnQ80YR7 1315 aa19.04■□□□□ 0.64
Rab11fip1-201ENSMUST00000033878 Cc2d2aQ8CFW7 1633 aa19.01■□□□□ 0.63
Rab11fip1-201ENSMUST00000033878 Smarca4Q3TKT4 1613 aaKnown RBP18.97■□□□□ 0.63
Rab11fip1-201ENSMUST00000033878 SafbD3YXK2 937 aaKnown RBP18.96■□□□□ 0.63
Rab11fip1-201ENSMUST00000033878 Cttnbp2B9EJA2 1648 aa18.93■□□□□ 0.62
Rab11fip1-201ENSMUST00000033878 TonslQ6NZL6 1363 aa18.93■□□□□ 0.62
Rab11fip1-201ENSMUST00000033878 Fam71e1A1L3C1 212 aa18.85■□□□□ 0.61
Rab11fip1-201ENSMUST00000033878 Top2bQ64511 1612 aa18.83■□□□□ 0.6
Rab11fip1-201ENSMUST00000033878 Rapgef2Q8CHG7 1496 aa18.82■□□□□ 0.6
Rab11fip1-201ENSMUST00000033878 Iqgap2Q3UQ44 1575 aa18.82■□□□□ 0.6
Rab11fip1-201ENSMUST00000033878 Hnrnpul2Q00PI9 745 aaKnown RBP18.81■□□□□ 0.6
Rab11fip1-201ENSMUST00000033878 Clip1Q922J3 1391 aa18.8■□□□□ 0.6
Rab11fip1-201ENSMUST00000033878 Lmod2Q3UHZ5 550 aa18.78■□□□□ 0.6
Rab11fip1-201ENSMUST00000033878 DiexfQ8BTT6 772 aaKnown RBP18.78■□□□□ 0.6
Rab11fip1-201ENSMUST00000033878 Myt1Q8CFC2 1127 aa18.76■□□□□ 0.59
Rab11fip1-201ENSMUST00000033878 Fam50aQ9WV03 339 aaKnown RBP18.76■□□□□ 0.59
Rab11fip1-201ENSMUST00000033878 Fmn1Q05860 1466 aa18.74■□□□□ 0.59
Rab11fip1-201ENSMUST00000033878 Cep162Q6ZQ06 1403 aa18.73■□□□□ 0.59
Rab11fip1-201ENSMUST00000033878 Kif15Q6P9L6 1387 aa18.7■□□□□ 0.58
Rab11fip1-201ENSMUST00000033878 Slc24a1Q91WD8 1130 aa18.7■□□□□ 0.58
Rab11fip1-201ENSMUST00000033878 Atad2bE9Q166 1460 aaKnown RBP18.68■□□□□ 0.58
Rab11fip1-201ENSMUST00000033878 Ube2uB1AUC4 352 aa18.64■□□□□ 0.57
Rab11fip1-201ENSMUST00000033878 Pds5bQ4VA53 1446 aaKnown RBP18.61■□□□□ 0.57
Rab11fip1-201ENSMUST00000033878 Top2aQ01320 1528 aaKnown RBP18.6■□□□□ 0.57
Rab11fip1-201ENSMUST00000033878 Bcl11aQ9QYE3 773 aa18.59■□□□□ 0.57
Rab11fip1-201ENSMUST00000033878 PtprkP35822 1457 aa18.57■□□□□ 0.56
Rab11fip1-201ENSMUST00000033878 Ubl4bQ9CQ84 188 aa18.56■□□□□ 0.56
Rab11fip1-201ENSMUST00000033878 NclP09405 707 aaKnown RBP18.53■□□□□ 0.56
Rab11fip1-201ENSMUST00000033878 Frmpd1A2AKB4 1549 aa18.53■□□□□ 0.56
Rab11fip1-201ENSMUST00000033878 Ifnlr1Q8CGK5 535 aa18.51■□□□□ 0.55
Rab11fip1-201ENSMUST00000033878 Npm1Q61937 292 aaKnown RBP18.5■□□□□ 0.55
Rab11fip1-201ENSMUST00000033878 Tnnt3Q9QZ47 272 aa18.44■□□□□ 0.54
Rab11fip1-201ENSMUST00000033878 Ttbk1Q6PCN3 1308 aa18.43■□□□□ 0.54
Rab11fip1-201ENSMUST00000033878 Ercc6F8VPZ5 1481 aa18.42■□□□□ 0.54
Rab11fip1-201ENSMUST00000033878 Setd5Q5XJV7 1441 aa18.42■□□□□ 0.54
Rab11fip1-201ENSMUST00000033878 Eif5bQ05D44 1216 aaKnown RBP18.37■□□□□ 0.53
Rab11fip1-201ENSMUST00000033878 BlmO88700 1416 aa18.35■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms