RNA–Protein interactions for RNA: ENSMUST00000029812.13

Nfkb1-201, Transcript of Nuclear factor NF-kappa-B p105 subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nfkb1, Length 4,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1-201ENSMUST00000029812 Rhox8Q6VSS7 320 aa27.37■■□□□ 1.97
Nfkb1-201ENSMUST00000029812 Ehmt2Q9Z148 1263 aaKnown RBP25.35■■□□□ 1.65
Nfkb1-201ENSMUST00000029812 Ccdc136Q3TVA9 1136 aa24.76■■□□□ 1.55
Nfkb1-201ENSMUST00000029812 NischQ80TM9 1593 aa24.62■■□□□ 1.53
Nfkb1-201ENSMUST00000029812 Rpgrip1Q9EPQ2 1331 aa24.54■■□□□ 1.52
Nfkb1-201ENSMUST00000029812 Gab3Q8BSM5 595 aa24.09■■□□□ 1.45
Nfkb1-201ENSMUST00000029812 Cngb1E1AZ71 1325 aa24.01■■□□□ 1.43
Nfkb1-201ENSMUST00000029812 Trim41Q5NCC3 630 aa23.94■■□□□ 1.42
Nfkb1-201ENSMUST00000029812 Zeb1Q64318 1117 aa23.91■■□□□ 1.42
Nfkb1-201ENSMUST00000029812 Esf1Q3V1V3 845 aaKnown RBP23.78■■□□□ 1.4
Nfkb1-201ENSMUST00000029812 Wdr66E9Q743 1299 aa23.68■■□□□ 1.38
Nfkb1-201ENSMUST00000029812 Acin1Q9JIX8 1338 aaKnown RBP23.6■■□□□ 1.37
Nfkb1-201ENSMUST00000029812 Myt1lP97500 1187 aa23.4■■□□□ 1.34
Nfkb1-201ENSMUST00000029812 Las1lA2BE28 776 aaKnown RBP23.32■■□□□ 1.32
Nfkb1-201ENSMUST00000029812 Npm2Q80W85 207 aa23.21■■□□□ 1.31
Nfkb1-201ENSMUST00000029812 UbtfP25976 765 aaKnown RBP23.16■■□□□ 1.3
Nfkb1-201ENSMUST00000029812 Pcgf6Q99NA9 353 aa23.13■■□□□ 1.29
Nfkb1-201ENSMUST00000029812 HrcG5E8J6 738 aa23.07■■□□□ 1.28
Nfkb1-201ENSMUST00000029812 Abcc9P70170 1546 aa23.06■■□□□ 1.28
Nfkb1-201ENSMUST00000029812 Ube2uB1AUC4 352 aa23.02■■□□□ 1.28
Nfkb1-201ENSMUST00000029812 Ccdc180J3QNE4 1664 aa22.98■■□□□ 1.27
Nfkb1-201ENSMUST00000029812 Ppargc1bQ8VHJ7 1014 aa22.93■■□□□ 1.26
Nfkb1-201ENSMUST00000029812 Supt5hO55201 1082 aaKnown RBP22.83■■□□□ 1.25
Nfkb1-201ENSMUST00000029812 NefmP08553 848 aa22.8■■□□□ 1.24
Nfkb1-201ENSMUST00000029812 Zcchc6Q5BLK4 1491 aaKnown RBP22.69■■□□□ 1.22
Nfkb1-201ENSMUST00000029812 Il27Q8K3I6 234 aa22.62■■□□□ 1.21
Nfkb1-201ENSMUST00000029812 Abcc8B2RUS7 1588 aa22.6■■□□□ 1.21
Nfkb1-201ENSMUST00000029812 Gm35339A0A140LHH9 1649 aa22.57■■□□□ 1.2
Nfkb1-201ENSMUST00000029812 Slc24a1Q91WD8 1130 aa22.5■■□□□ 1.19
Nfkb1-201ENSMUST00000029812 Rtl1Q7M732 1744 aa22.5■■□□□ 1.19
Nfkb1-201ENSMUST00000029812 Ap3b1Q9Z1T1 1105 aa22.45■■□□□ 1.18
Nfkb1-201ENSMUST00000029812 Mier1Q5UAK0 511 aa22.43■■□□□ 1.18
Nfkb1-201ENSMUST00000029812 Cdk11bP24788 784 aaKnown RBP22.38■■□□□ 1.17
Nfkb1-201ENSMUST00000029812 CenpbP27790 599 aa22.33■■□□□ 1.17
Nfkb1-201ENSMUST00000029812 Nop58Q6DFW4 536 aaKnown RBP22.28■■□□□ 1.16
Nfkb1-201ENSMUST00000029812 Fam50aQ9WV03 339 aaKnown RBP22.22■■□□□ 1.15
Nfkb1-201ENSMUST00000029812 Chic1Q8CBW7 227 aa22.19■■□□□ 1.14
Nfkb1-201ENSMUST00000029812 Neurod1Q60867 357 aa22.1■■□□□ 1.13
Nfkb1-201ENSMUST00000029812 Plekhg3Q4VAC9 1341 aa22.09■■□□□ 1.13
Nfkb1-201ENSMUST00000029812 Sall2Q9QX96 1004 aa22.03■■□□□ 1.12
Nfkb1-201ENSMUST00000029812 NclP09405 707 aaKnown RBP22.02■■□□□ 1.12
Nfkb1-201ENSMUST00000029812 TonslQ6NZL6 1363 aa22.01■■□□□ 1.11
Nfkb1-201ENSMUST00000029812 Pelp1Q9DBD5 1123 aaKnown RBP21.99■■□□□ 1.11
Nfkb1-201ENSMUST00000029812 Mapk8ip2Q9ERE9 830 aa21.97■■□□□ 1.11
Nfkb1-201ENSMUST00000029812 Gm38655A0A286YDK6 273 aa21.94■■□□□ 1.1
Nfkb1-201ENSMUST00000029812 Eid3Q3V124 375 aa21.93■■□□□ 1.1
Nfkb1-201ENSMUST00000029812 Lmod2Q3UHZ5 550 aa21.87■■□□□ 1.09
Nfkb1-201ENSMUST00000029812 Stra8P70278 393 aa21.84■■□□□ 1.09
Nfkb1-201ENSMUST00000029812 Eif5bQ05D44 1216 aaKnown RBP21.84■■□□□ 1.09
Nfkb1-201ENSMUST00000029812 Dcaf1Q80TR8 1506 aa21.81■■□□□ 1.08
Nfkb1-201ENSMUST00000029812 Csrnp3P59055 597 aa21.73■■□□□ 1.07
Nfkb1-201ENSMUST00000029812 Ttbk1Q6PCN3 1308 aa21.72■■□□□ 1.07
Nfkb1-201ENSMUST00000029812 Cep164Q5DU05 1446 aa21.7■■□□□ 1.06
Nfkb1-201ENSMUST00000029812 ClspnQ80YR7 1315 aa21.68■■□□□ 1.06
Nfkb1-201ENSMUST00000029812 Rb1cc1Q9ESK9 1588 aa21.61■■□□□ 1.05
Nfkb1-201ENSMUST00000029812 NrdcQ8BHG1 1161 aa21.59■■□□□ 1.05
Nfkb1-201ENSMUST00000029812 Amer1Q7TS75 1132 aa21.55■■□□□ 1.04
Nfkb1-201ENSMUST00000029812 Tnnt3Q9QZ47 272 aa21.55■■□□□ 1.04
Nfkb1-201ENSMUST00000029812 Zbtb7cQ8VCZ7 619 aa21.52■■□□□ 1.04
Nfkb1-201ENSMUST00000029812 Aebp2Q9Z248 504 aaKnown RBP21.5■■□□□ 1.03
Nfkb1-201ENSMUST00000029812 Clip1Q922J3 1391 aa21.47■■□□□ 1.03
Nfkb1-201ENSMUST00000029812 Brd4Q9ESU6 1400 aaKnown RBP21.45■■□□□ 1.02
Nfkb1-201ENSMUST00000029812 Anks4bQ8K3X6 423 aa21.44■■□□□ 1.02
Nfkb1-201ENSMUST00000029812 Zbtb4Q5F293 982 aa21.41■■□□□ 1.02
Nfkb1-201ENSMUST00000029812 Npm1Q61937 292 aaKnown RBP21.39■■□□□ 1.01
Nfkb1-201ENSMUST00000029812 Rsf1E9PWW9 1441 aaKnown RBP21.23■□□□□ 0.99
Nfkb1-201ENSMUST00000029812 Os9Q8K2C7 672 aa21.22■□□□□ 0.99
Nfkb1-201ENSMUST00000029812 1700123L14RikQ3V2K7 440 aa21.21■□□□□ 0.99
Nfkb1-201ENSMUST00000029812 Anp32bQ9EST5 272 aaKnown RBP21.17■□□□□ 0.98
Nfkb1-201ENSMUST00000029812 Chic2Q9D9G3 165 aa21.15■□□□□ 0.98
Nfkb1-201ENSMUST00000029812 4933416C03RikQ3V063 378 aa21.13■□□□□ 0.97
Nfkb1-201ENSMUST00000029812 Myt1Q8CFC2 1127 aa21.13■□□□□ 0.97
Nfkb1-201ENSMUST00000029812 Hnrnpul2Q00PI9 745 aaKnown RBP21.12■□□□□ 0.97
Nfkb1-201ENSMUST00000029812 NeflP08551 543 aa21.12■□□□□ 0.97
Nfkb1-201ENSMUST00000029812 Fkbp15Q6P9Q6 1216 aaKnown RBP21.08■□□□□ 0.97
Nfkb1-201ENSMUST00000029812 Baz1aO88379 1555 aa21.08■□□□□ 0.96
Nfkb1-201ENSMUST00000029812 Prdm10Q3UTQ7 1184 aa21.06■□□□□ 0.96
Nfkb1-201ENSMUST00000029812 Aplp2Q06335 707 aa21.05■□□□□ 0.96
Nfkb1-201ENSMUST00000029812 Ifnlr1Q8CGK5 535 aa21.05■□□□□ 0.96
Nfkb1-201ENSMUST00000029812 Anp32aO35381 247 aa21.04■□□□□ 0.96
Nfkb1-201ENSMUST00000029812 BlmO88700 1416 aa21.01■□□□□ 0.95
Nfkb1-201ENSMUST00000029812 Golga3P55937 1487 aa21■□□□□ 0.95
Nfkb1-201ENSMUST00000029812 NacadQ5SWP3 1504 aa21■□□□□ 0.95
Nfkb1-201ENSMUST00000029812 Ccdc88bQ4QRL3 1481 aa20.96■□□□□ 0.95
Nfkb1-201ENSMUST00000029812 Setd5Q5XJV7 1441 aa20.92■□□□□ 0.94
Nfkb1-201ENSMUST00000029812 Calr4Q3TQS0 420 aa20.9■□□□□ 0.94
Nfkb1-201ENSMUST00000029812 Mrs2Q5NCE8 434 aa20.89■□□□□ 0.94
Nfkb1-201ENSMUST00000029812 Ppp4r2Q0VGB7 417 aa20.89■□□□□ 0.93
Nfkb1-201ENSMUST00000029812 Ubl4bQ9CQ84 188 aa20.89■□□□□ 0.93
Nfkb1-201ENSMUST00000029812 Kdm5dQ62240 1548 aa20.88■□□□□ 0.93
Nfkb1-201ENSMUST00000029812 Erich6D3Z6S9 713 aa20.87■□□□□ 0.93
Nfkb1-201ENSMUST00000029812 SafbD3YXK2 937 aaKnown RBP20.86■□□□□ 0.93
Nfkb1-201ENSMUST00000029812 P3h3Q8CG70 732 aa20.83■□□□□ 0.93
Nfkb1-201ENSMUST00000029812 Fam71e1A1L3C1 212 aa20.77■□□□□ 0.92
Nfkb1-201ENSMUST00000029812 ArxO35085 564 aa20.76■□□□□ 0.91
Nfkb1-201ENSMUST00000029812 DaxxO35613 739 aa20.74■□□□□ 0.91
Nfkb1-201ENSMUST00000029812 Rad21Q61550 635 aaKnown RBP20.74■□□□□ 0.91
Nfkb1-201ENSMUST00000029812 DiexfQ8BTT6 772 aaKnown RBP20.74■□□□□ 0.91
Nfkb1-201ENSMUST00000029812 Ccer2J3QPU5 274 aa20.7■□□□□ 0.9
Nfkb1-201ENSMUST00000029812 Polr3glQ8R0C0 218 aa20.67■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 60.3 ms