RNA–Protein interactions for RNA: ENSMUST00000028799.11

Knl1-201, Transcript of Kinetochore scaffold 1, mousemouse

TSL 1 (best) BASIC

Gene Knl1, Length 5,527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1-201ENSMUST00000028799 Rhox8Q6VSS7 320 aa28.55■■■□□ 2.16
Knl1-201ENSMUST00000028799 Rpgrip1Q9EPQ2 1331 aa26.72■■□□□ 1.87
Knl1-201ENSMUST00000028799 NischQ80TM9 1593 aa26.15■■□□□ 1.78
Knl1-201ENSMUST00000028799 Ehmt2Q9Z148 1263 aaKnown RBP25.53■■□□□ 1.68
Knl1-201ENSMUST00000028799 Ccdc136Q3TVA9 1136 aa25.46■■□□□ 1.67
Knl1-201ENSMUST00000028799 Trim41Q5NCC3 630 aa25.23■■□□□ 1.63
Knl1-201ENSMUST00000028799 Cngb1E1AZ71 1325 aa25.19■■□□□ 1.62
Knl1-201ENSMUST00000028799 Las1lA2BE28 776 aaKnown RBP25.16■■□□□ 1.62
Knl1-201ENSMUST00000028799 Esf1Q3V1V3 845 aaKnown RBP25.11■■□□□ 1.61
Knl1-201ENSMUST00000028799 Ccdc180J3QNE4 1664 aa25.02■■□□□ 1.6
Knl1-201ENSMUST00000028799 Rtl1Q7M732 1744 aa24.97■■□□□ 1.59
Knl1-201ENSMUST00000028799 Wdr66E9Q743 1299 aa24.84■■□□□ 1.57
Knl1-201ENSMUST00000028799 Acin1Q9JIX8 1338 aaKnown RBP24.82■■□□□ 1.56
Knl1-201ENSMUST00000028799 Gab3Q8BSM5 595 aa24.81■■□□□ 1.56
Knl1-201ENSMUST00000028799 Zeb1Q64318 1117 aa24.68■■□□□ 1.54
Knl1-201ENSMUST00000028799 Abcc9P70170 1546 aa24.59■■□□□ 1.53
Knl1-201ENSMUST00000028799 Npm2Q80W85 207 aa24.58■■□□□ 1.53
Knl1-201ENSMUST00000028799 HrcG5E8J6 738 aa24.57■■□□□ 1.52
Knl1-201ENSMUST00000028799 NefmP08553 848 aa24.46■■□□□ 1.51
Knl1-201ENSMUST00000028799 Pelp1Q9DBD5 1123 aaKnown RBP24.39■■□□□ 1.49
Knl1-201ENSMUST00000028799 Ube2uB1AUC4 352 aa24.34■■□□□ 1.49
Knl1-201ENSMUST00000028799 Myt1lP97500 1187 aa24.33■■□□□ 1.49
Knl1-201ENSMUST00000028799 UbtfP25976 765 aaKnown RBP24.02■■□□□ 1.44
Knl1-201ENSMUST00000028799 Abcc8B2RUS7 1588 aa23.96■■□□□ 1.43
Knl1-201ENSMUST00000028799 CenpbP27790 599 aa23.95■■□□□ 1.42
Knl1-201ENSMUST00000028799 Zcchc6Q5BLK4 1491 aaKnown RBP23.93■■□□□ 1.42
Knl1-201ENSMUST00000028799 Stra8P70278 393 aa23.91■■□□□ 1.42
Knl1-201ENSMUST00000028799 Pcgf6Q99NA9 353 aa23.76■■□□□ 1.39
Knl1-201ENSMUST00000028799 Cdk11bP24788 784 aaKnown RBP23.6■■□□□ 1.37
Knl1-201ENSMUST00000028799 Il27Q8K3I6 234 aa23.45■■□□□ 1.34
Knl1-201ENSMUST00000028799 Tnnt3Q9QZ47 272 aa23.39■■□□□ 1.33
Knl1-201ENSMUST00000028799 Gm35339A0A140LHH9 1649 aa23.38■■□□□ 1.33
Knl1-201ENSMUST00000028799 Nop58Q6DFW4 536 aaKnown RBP23.34■■□□□ 1.33
Knl1-201ENSMUST00000028799 Myt1Q8CFC2 1127 aa23.3■■□□□ 1.32
Knl1-201ENSMUST00000028799 Supt5hO55201 1082 aaKnown RBP23.29■■□□□ 1.32
Knl1-201ENSMUST00000028799 Slc24a1Q91WD8 1130 aa23.27■■□□□ 1.32
Knl1-201ENSMUST00000028799 TonslQ6NZL6 1363 aa23.26■■□□□ 1.31
Knl1-201ENSMUST00000028799 Mier1Q5UAK0 511 aa23.23■■□□□ 1.31
Knl1-201ENSMUST00000028799 Dcaf1Q80TR8 1506 aa23.2■■□□□ 1.31
Knl1-201ENSMUST00000028799 Fam50aQ9WV03 339 aaKnown RBP23.2■■□□□ 1.31
Knl1-201ENSMUST00000028799 Ap3b1Q9Z1T1 1105 aa23.19■■□□□ 1.3
Knl1-201ENSMUST00000028799 NclP09405 707 aaKnown RBP23.17■■□□□ 1.3
Knl1-201ENSMUST00000028799 NrdcQ8BHG1 1161 aa23.1■■□□□ 1.29
Knl1-201ENSMUST00000028799 Brd4Q9ESU6 1400 aaKnown RBP23.09■■□□□ 1.29
Knl1-201ENSMUST00000028799 Cep164Q5DU05 1446 aa23.08■■□□□ 1.28
Knl1-201ENSMUST00000028799 Anp32bQ9EST5 272 aaKnown RBP23.07■■□□□ 1.28
Knl1-201ENSMUST00000028799 Rb1cc1Q9ESK9 1588 aa23.05■■□□□ 1.28
Knl1-201ENSMUST00000028799 ClspnQ80YR7 1315 aa22.94■■□□□ 1.26
Knl1-201ENSMUST00000028799 Amer1Q7TS75 1132 aa22.92■■□□□ 1.26
Knl1-201ENSMUST00000028799 Neurod1Q60867 357 aa22.86■■□□□ 1.25
Knl1-201ENSMUST00000028799 NeflP08551 543 aa22.83■■□□□ 1.24
Knl1-201ENSMUST00000028799 Ppargc1bQ8VHJ7 1014 aa22.82■■□□□ 1.24
Knl1-201ENSMUST00000028799 Rtl5Q5DTT4 599 aa22.76■■□□□ 1.23
Knl1-201ENSMUST00000028799 Plekhg3Q4VAC9 1341 aa22.75■■□□□ 1.23
Knl1-201ENSMUST00000028799 Npm1Q61937 292 aaKnown RBP22.74■■□□□ 1.23
Knl1-201ENSMUST00000028799 Eif5bQ05D44 1216 aaKnown RBP22.72■■□□□ 1.23
Knl1-201ENSMUST00000028799 Chic1Q8CBW7 227 aa22.65■■□□□ 1.22
Knl1-201ENSMUST00000028799 Clip1Q922J3 1391 aa22.63■■□□□ 1.21
Knl1-201ENSMUST00000028799 NacadQ5SWP3 1504 aa22.61■■□□□ 1.21
Knl1-201ENSMUST00000028799 Baz1aO88379 1555 aa22.59■■□□□ 1.21
Knl1-201ENSMUST00000028799 Lmod2Q3UHZ5 550 aa22.59■■□□□ 1.21
Knl1-201ENSMUST00000028799 Os9Q8K2C7 672 aa22.58■■□□□ 1.21
Knl1-201ENSMUST00000028799 4933416C03RikQ3V063 378 aa22.52■■□□□ 1.2
Knl1-201ENSMUST00000028799 Anks4bQ8K3X6 423 aa22.48■■□□□ 1.19
Knl1-201ENSMUST00000028799 Ccer2J3QPU5 274 aa22.48■■□□□ 1.19
Knl1-201ENSMUST00000028799 Sall2Q9QX96 1004 aa22.47■■□□□ 1.19
Knl1-201ENSMUST00000028799 Anp32aO35381 247 aa22.47■■□□□ 1.19
Knl1-201ENSMUST00000028799 Ttbk1Q6PCN3 1308 aa22.44■■□□□ 1.18
Knl1-201ENSMUST00000028799 Golga3P55937 1487 aa22.33■■□□□ 1.16
Knl1-201ENSMUST00000028799 Eid3Q3V124 375 aa22.27■■□□□ 1.16
Knl1-201ENSMUST00000028799 Hdac5Q9Z2V6 1113 aa22.26■■□□□ 1.15
Knl1-201ENSMUST00000028799 Aplp2Q06335 707 aa22.24■■□□□ 1.15
Knl1-201ENSMUST00000028799 Csrnp3P59055 597 aa22.13■■□□□ 1.13
Knl1-201ENSMUST00000028799 Hnrnpul2Q00PI9 745 aaKnown RBP22.12■■□□□ 1.13
Knl1-201ENSMUST00000028799 Zbtb7cQ8VCZ7 619 aa22.11■■□□□ 1.13
Knl1-201ENSMUST00000028799 Kdm5dQ62240 1548 aa22.09■■□□□ 1.13
Knl1-201ENSMUST00000028799 4930567H17RikQ3V0K5 233 aa22.08■■□□□ 1.13
Knl1-201ENSMUST00000028799 Mapk8ip2Q9ERE9 830 aa22.08■■□□□ 1.13
Knl1-201ENSMUST00000028799 BlmO88700 1416 aa22.08■■□□□ 1.12
Knl1-201ENSMUST00000028799 Setd5Q5XJV7 1441 aa22.04■■□□□ 1.12
Knl1-201ENSMUST00000028799 Ubl4bQ9CQ84 188 aa22.02■■□□□ 1.11
Knl1-201ENSMUST00000028799 Nlrp6Q91WS2 869 aa22.01■■□□□ 1.11
Knl1-201ENSMUST00000028799 Calr4Q3TQS0 420 aa21.96■■□□□ 1.11
Knl1-201ENSMUST00000028799 Rsf1E9PWW9 1441 aaKnown RBP21.95■■□□□ 1.1
Knl1-201ENSMUST00000028799 Upf2A2AT37 1269 aaKnown RBP21.94■■□□□ 1.1
Knl1-201ENSMUST00000028799 Erich6D3Z6S9 713 aa21.91■■□□□ 1.1
Knl1-201ENSMUST00000028799 Eea1Q8BL66 1411 aa21.91■■□□□ 1.1
Knl1-201ENSMUST00000028799 Gm38655A0A286YDK6 273 aa21.87■■□□□ 1.09
Knl1-201ENSMUST00000028799 Zbtb4Q5F293 982 aa21.85■■□□□ 1.09
Knl1-201ENSMUST00000028799 Chic2Q9D9G3 165 aa21.85■■□□□ 1.09
Knl1-201ENSMUST00000028799 DaxxO35613 739 aa21.83■■□□□ 1.09
Knl1-201ENSMUST00000028799 Clstn2Q9ER65 966 aa21.83■■□□□ 1.08
Knl1-201ENSMUST00000028799 Kif15Q6P9L6 1387 aa21.82■■□□□ 1.08
Knl1-201ENSMUST00000028799 Ccdc18Q640L5 1455 aa21.82■■□□□ 1.08
Knl1-201ENSMUST00000028799 DiexfQ8BTT6 772 aaKnown RBP21.81■■□□□ 1.08
Knl1-201ENSMUST00000028799 Ercc6F8VPZ5 1481 aa21.78■■□□□ 1.08
Knl1-201ENSMUST00000028799 Gm13697A2AK42 830 aa21.77■■□□□ 1.08
Knl1-201ENSMUST00000028799 Mrs2Q5NCE8 434 aa21.77■■□□□ 1.07
Knl1-201ENSMUST00000028799 Ppp4r2Q0VGB7 417 aa21.76■■□□□ 1.07
Knl1-201ENSMUST00000028799 Aebp2Q9Z248 504 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms