RNA–Protein interactions for RNA: ENSMUST00000020753.3

Clhc1-201, Transcript of Clathrin heavy chain linker domain-containing protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clhc1, Length 2,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1-201ENSMUST00000020753 Chic1Q8CBW7 227 aa14.63□□□□□ -0.07
Clhc1-201ENSMUST00000020753 Mapk8ip2Q9ERE9 830 aa14.16□□□□□ -0.14
Clhc1-201ENSMUST00000020753 Phf23Q8BSN5 401 aa13.24□□□□□ -0.29
Clhc1-201ENSMUST00000020753 Plppr3Q7TPB0 716 aa13.05□□□□□ -0.32
Clhc1-201ENSMUST00000020753 Gab3Q8BSM5 595 aa12.68□□□□□ -0.38
Clhc1-201ENSMUST00000020753 Kcna4Q61423 654 aa12.5□□□□□ -0.41
Clhc1-201ENSMUST00000020753 Senp3Q9EP97 568 aaKnown RBP12.23□□□□□ -0.45
Clhc1-201ENSMUST00000020753 Ppargc1bQ8VHJ7 1014 aa11.56□□□□□ -0.56
Clhc1-201ENSMUST00000020753 Ube2uB1AUC4 352 aa11.12□□□□□ -0.63
Clhc1-201ENSMUST00000020753 Dmrt2Q8BG36 561 aa11.1□□□□□ -0.63
Clhc1-201ENSMUST00000020753 Slc4a1apE9PX68 744 aa10.78□□□□□ -0.68
Clhc1-201ENSMUST00000020753 Trap1aP19473 224 aa10.73□□□□□ -0.69
Clhc1-201ENSMUST00000020753 Hoxd11P23813 323 aa10.65□□□□□ -0.71
Clhc1-201ENSMUST00000020753 Atf5O70191 283 aa10.53□□□□□ -0.72
Clhc1-201ENSMUST00000020753 Fam71e1A1L3C1 212 aa10.46□□□□□ -0.74
Clhc1-201ENSMUST00000020753 Fam163aQ8CAA5 168 aa10.46□□□□□ -0.74
Clhc1-201ENSMUST00000020753 Ehmt2Q9Z148 1263 aaKnown RBP10.38□□□□□ -0.75
Clhc1-201ENSMUST00000020753 1700123L14RikQ3V2K7 440 aa10.23□□□□□ -0.77
Clhc1-201ENSMUST00000020753 Ppp4r2Q0VGB7 417 aa10.19□□□□□ -0.78
Clhc1-201ENSMUST00000020753 Znf219Q6IQX8 726 aa10.19□□□□□ -0.78
Clhc1-201ENSMUST00000020753 Chrna2Q91X60 512 aa10.14□□□□□ -0.79
Clhc1-201ENSMUST00000020753 Hs6st3Q9QYK4 470 aa10.07□□□□□ -0.8
Clhc1-201ENSMUST00000020753 Pde4cQ3UEI1 686 aa10.05□□□□□ -0.8
Clhc1-201ENSMUST00000020753 Rsph4aQ8BYM7 716 aa10.05□□□□□ -0.8
Clhc1-201ENSMUST00000020753 Nlrp6Q91WS2 869 aa10.03□□□□□ -0.8
Clhc1-201ENSMUST00000020753 AcrbpQ3V140 540 aa10.02□□□□□ -0.81
Clhc1-201ENSMUST00000020753 Cdca7Q9D0M2 382 aa9.94□□□□□ -0.82
Clhc1-201ENSMUST00000020753 Rimbp2Q80U40 1072 aa9.92□□□□□ -0.82
Clhc1-201ENSMUST00000020753 Tshz2Q68FE9 1030 aa9.91□□□□□ -0.82
Clhc1-201ENSMUST00000020753 Dnajc5bQ9CQ94 199 aa9.89□□□□□ -0.83
Clhc1-201ENSMUST00000020753 Bach1P97302 739 aa9.76□□□□□ -0.85
Clhc1-201ENSMUST00000020753 Rtn4Q99P72 1162 aaKnown RBP9.74□□□□□ -0.85
Clhc1-201ENSMUST00000020753 Prdm10Q3UTQ7 1184 aa9.67□□□□□ -0.86
Clhc1-201ENSMUST00000020753 ArsiQ32KI9 573 aa9.66□□□□□ -0.86
Clhc1-201ENSMUST00000020753 Prm3Q62100 101 aa9.66□□□□□ -0.86
Clhc1-201ENSMUST00000020753 Akt1s1Q9D1F4 257 aa9.63□□□□□ -0.87
Clhc1-201ENSMUST00000020753 Ecm2Q5FW85 670 aa9.62□□□□□ -0.87
Clhc1-201ENSMUST00000020753 Riok3Q9DBU3 519 aaKnown RBP9.54□□□□□ -0.88
Clhc1-201ENSMUST00000020753 Styxl1Q9DAR2 321 aa9.51□□□□□ -0.89
Clhc1-201ENSMUST00000020753 Ms4a5Q810P8 197 aa9.5□□□□□ -0.89
Clhc1-201ENSMUST00000020753 WdpcpQ8C456 722 aa9.5□□□□□ -0.89
Clhc1-201ENSMUST00000020753 C1qtnf12Q8R2Z0 308 aa9.48□□□□□ -0.89
Clhc1-201ENSMUST00000020753 MyclP10166 368 aa9.48□□□□□ -0.89
Clhc1-201ENSMUST00000020753 Slc34a2Q9DBP0 697 aa9.47□□□□□ -0.89
Clhc1-201ENSMUST00000020753 Npm2Q80W85 207 aa9.4□□□□□ -0.9
Clhc1-201ENSMUST00000020753 Sox12Q04890 314 aa9.32□□□□□ -0.92
Clhc1-201ENSMUST00000020753 Prdm16A2A935 1275 aa9.25□□□□□ -0.93
Clhc1-201ENSMUST00000020753 Arid3aQ62431 601 aa9.18□□□□□ -0.94
Clhc1-201ENSMUST00000020753 Tcf3P15806 651 aa9.13□□□□□ -0.95
Clhc1-201ENSMUST00000020753 Trim41Q5NCC3 630 aa9.11□□□□□ -0.95
Clhc1-201ENSMUST00000020753 G430095P16RikE9Q913 147 aa9.08□□□□□ -0.96
Clhc1-201ENSMUST00000020753 Taok2Q6ZQ29 1240 aa9.08□□□□□ -0.96
Clhc1-201ENSMUST00000020753 MpndQ3TV65 487 aa9□□□□□ -0.97
Clhc1-201ENSMUST00000020753 Ppp6r1Q7TSI3 856 aa8.97□□□□□ -0.97
Clhc1-201ENSMUST00000020753 Ppp1r37Q8BKR5 712 aa8.96□□□□□ -0.98
Clhc1-201ENSMUST00000020753 CatipB9EKE5 520 aa8.91□□□□□ -0.98
Clhc1-201ENSMUST00000020753 Zbtb7aO88939 569 aaKnown RBP8.9□□□□□ -0.98
Clhc1-201ENSMUST00000020753 Skap1Q3UUV5 355 aa8.9□□□□□ -0.98
Clhc1-201ENSMUST00000020753 Ifnlr1Q8CGK5 535 aa8.9□□□□□ -0.98
Clhc1-201ENSMUST00000020753 Npm3Q9CPP0 175 aaKnown RBP8.89□□□□□ -0.99
Clhc1-201ENSMUST00000020753 Fbln2P37889 1221 aa8.87□□□□□ -0.99
Clhc1-201ENSMUST00000020753 Egfem1Q8C088 590 aa8.86□□□□□ -0.99
Clhc1-201ENSMUST00000020753 Abcb7Q61102 752 aaKnown RBP8.83□□□□□ -1
Clhc1-201ENSMUST00000020753 Grwd1Q810D6 446 aaKnown RBP8.8□□□□□ -1
Clhc1-201ENSMUST00000020753 Zbtb22Q9Z0G7 638 aa8.79□□□□□ -1
Clhc1-201ENSMUST00000020753 Esf1Q3V1V3 845 aaKnown RBP8.75□□□□□ -1.01
Clhc1-201ENSMUST00000020753 Gtpbp6Q3U6U5 514 aa8.7□□□□□ -1.02
Clhc1-201ENSMUST00000020753 Znf704Q9ERQ3 566 aa8.7□□□□□ -1.02
Clhc1-201ENSMUST00000020753 Zbtb12Q9Z150 459 aa8.69□□□□□ -1.02
Clhc1-201ENSMUST00000020753 Mkrn3Q60764 544 aa8.66□□□□□ -1.02
Clhc1-201ENSMUST00000020753 Slc4a2P13808 1237 aaKnown RBP8.65□□□□□ -1.02
Clhc1-201ENSMUST00000020753 Spock2Q9ER58 423 aa8.64□□□□□ -1.03
Clhc1-201ENSMUST00000020753 Rnf216P58283 853 aa8.64□□□□□ -1.03
Clhc1-201ENSMUST00000020753 Slc4a5E9Q3M5 1116 aa8.63□□□□□ -1.03
Clhc1-201ENSMUST00000020753 Nkx1-1G3UXB3 402 aa8.61□□□□□ -1.03
Clhc1-201ENSMUST00000020753 Jarid2Q62315 1234 aa8.59□□□□□ -1.03
Clhc1-201ENSMUST00000020753 TimelessQ9R1X4 1197 aa8.58□□□□□ -1.04
Clhc1-201ENSMUST00000020753 Skida1Q80YR3 822 aa8.56□□□□□ -1.04
Clhc1-201ENSMUST00000020753 Ferd3lQ923Z4 168 aa8.56□□□□□ -1.04
Clhc1-201ENSMUST00000020753 Lrrc43Q3V0L5 667 aa8.54□□□□□ -1.04
Clhc1-201ENSMUST00000020753 MycnP03966 462 aaKnown RBP8.52□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Fam117bQ3U3E2 584 aa8.52□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Noa1Q9JJG9 693 aaKnown RBP8.52□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Repin1Q5U4E2 545 aa8.5□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Pde4dQ01063 747 aa8.5□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Rgl2Q61193 778 aa8.48□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Zeb1Q64318 1117 aa8.46□□□□□ -1.05
Clhc1-201ENSMUST00000020753 Zbtb38Q3LR78 1197 aa8.45□□□□□ -1.06
Clhc1-201ENSMUST00000020753 Hdac5Q9Z2V6 1113 aa8.4□□□□□ -1.06
Clhc1-201ENSMUST00000020753 Stag3O70576 1240 aa8.38□□□□□ -1.07
Clhc1-201ENSMUST00000020753 Stk3Q9JI10 497 aa8.37□□□□□ -1.07
Clhc1-201ENSMUST00000020753 UncxO08934 530 aa8.36□□□□□ -1.07
Clhc1-201ENSMUST00000020753 Vsig10D3YX43 558 aa8.35□□□□□ -1.07
Clhc1-201ENSMUST00000020753 Slc24a1Q91WD8 1130 aa8.33□□□□□ -1.08
Clhc1-201ENSMUST00000020753 GapdhsQ64467 440 aa8.32□□□□□ -1.08
Clhc1-201ENSMUST00000020753 Sra1Q80VJ2 232 aa8.31□□□□□ -1.08
Clhc1-201ENSMUST00000020753 Spryd3E9Q9B3 442 aa8.3□□□□□ -1.08
Clhc1-201ENSMUST00000020753 Ubap1lG3UW59 384 aa8.3□□□□□ -1.08
Clhc1-201ENSMUST00000020753 Map4k4P97820 1233 aaKnown RBP8.29□□□□□ -1.08
Clhc1-201ENSMUST00000020753 Tmem132aQ922P8 1018 aa8.27□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms