RNA–Protein interactions for RNA: ENSMUST00000005218.14

Cd44-201, Transcript of CD44 antigen, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Cd44, Length 5,614 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-201ENSMUST00000005218 Rhox8Q6VSS7 320 aa12.25□□□□□ -0.45
Cd44-201ENSMUST00000005218 Ehmt2Q9Z148 1263 aaKnown RBP11.26□□□□□ -0.61
Cd44-201ENSMUST00000005218 Rpgrip1Q9EPQ2 1331 aa11.07□□□□□ -0.64
Cd44-201ENSMUST00000005218 Ccdc136Q3TVA9 1136 aa11□□□□□ -0.65
Cd44-201ENSMUST00000005218 NischQ80TM9 1593 aa10.9□□□□□ -0.66
Cd44-201ENSMUST00000005218 Cngb1E1AZ71 1325 aa10.83□□□□□ -0.68
Cd44-201ENSMUST00000005218 Gab3Q8BSM5 595 aa10.76□□□□□ -0.69
Cd44-201ENSMUST00000005218 Esf1Q3V1V3 845 aaKnown RBP10.74□□□□□ -0.69
Cd44-201ENSMUST00000005218 Wdr66E9Q743 1299 aa10.71□□□□□ -0.69
Cd44-201ENSMUST00000005218 Zeb1Q64318 1117 aa10.71□□□□□ -0.7
Cd44-201ENSMUST00000005218 Trim41Q5NCC3 630 aa10.63□□□□□ -0.71
Cd44-201ENSMUST00000005218 Las1lA2BE28 776 aaKnown RBP10.61□□□□□ -0.71
Cd44-201ENSMUST00000005218 Myt1lP97500 1187 aa10.51□□□□□ -0.73
Cd44-201ENSMUST00000005218 Npm2Q80W85 207 aa10.51□□□□□ -0.73
Cd44-201ENSMUST00000005218 Ube2uB1AUC4 352 aa10.5□□□□□ -0.73
Cd44-201ENSMUST00000005218 Acin1Q9JIX8 1338 aaKnown RBP10.48□□□□□ -0.73
Cd44-201ENSMUST00000005218 UbtfP25976 765 aaKnown RBP10.36□□□□□ -0.75
Cd44-201ENSMUST00000005218 Ccdc180J3QNE4 1664 aa10.35□□□□□ -0.75
Cd44-201ENSMUST00000005218 NefmP08553 848 aa10.23□□□□□ -0.77
Cd44-201ENSMUST00000005218 Rtl1Q7M732 1744 aa10.22□□□□□ -0.77
Cd44-201ENSMUST00000005218 HrcG5E8J6 738 aa10.21□□□□□ -0.77
Cd44-201ENSMUST00000005218 Pelp1Q9DBD5 1123 aaKnown RBP10.18□□□□□ -0.78
Cd44-201ENSMUST00000005218 Pcgf6Q99NA9 353 aa10.18□□□□□ -0.78
Cd44-201ENSMUST00000005218 Abcc9P70170 1546 aa10.16□□□□□ -0.78
Cd44-201ENSMUST00000005218 Slc24a1Q91WD8 1130 aa10.15□□□□□ -0.78
Cd44-201ENSMUST00000005218 Il27Q8K3I6 234 aa10.14□□□□□ -0.79
Cd44-201ENSMUST00000005218 Zcchc6Q5BLK4 1491 aaKnown RBP10.13□□□□□ -0.79
Cd44-201ENSMUST00000005218 Ppargc1bQ8VHJ7 1014 aa10.12□□□□□ -0.79
Cd44-201ENSMUST00000005218 CenpbP27790 599 aa10.12□□□□□ -0.79
Cd44-201ENSMUST00000005218 Ap3b1Q9Z1T1 1105 aa10.08□□□□□ -0.8
Cd44-201ENSMUST00000005218 Gm35339A0A140LHH9 1649 aa10.08□□□□□ -0.8
Cd44-201ENSMUST00000005218 Supt5hO55201 1082 aaKnown RBP10.05□□□□□ -0.8
Cd44-201ENSMUST00000005218 Cdk11bP24788 784 aaKnown RBP10.02□□□□□ -0.8
Cd44-201ENSMUST00000005218 Fam50aQ9WV03 339 aaKnown RBP9.98□□□□□ -0.81
Cd44-201ENSMUST00000005218 Stra8P70278 393 aa9.96□□□□□ -0.81
Cd44-201ENSMUST00000005218 Nop58Q6DFW4 536 aaKnown RBP9.94□□□□□ -0.82
Cd44-201ENSMUST00000005218 Neurod1Q60867 357 aa9.94□□□□□ -0.82
Cd44-201ENSMUST00000005218 Mier1Q5UAK0 511 aa9.94□□□□□ -0.82
Cd44-201ENSMUST00000005218 Abcc8B2RUS7 1588 aa9.93□□□□□ -0.82
Cd44-201ENSMUST00000005218 NclP09405 707 aaKnown RBP9.91□□□□□ -0.82
Cd44-201ENSMUST00000005218 Amer1Q7TS75 1132 aa9.9□□□□□ -0.82
Cd44-201ENSMUST00000005218 TonslQ6NZL6 1363 aa9.87□□□□□ -0.83
Cd44-201ENSMUST00000005218 Eif5bQ05D44 1216 aaKnown RBP9.86□□□□□ -0.83
Cd44-201ENSMUST00000005218 Ttbk1Q6PCN3 1308 aa9.83□□□□□ -0.84
Cd44-201ENSMUST00000005218 Plekhg3Q4VAC9 1341 aa9.8□□□□□ -0.84
Cd44-201ENSMUST00000005218 NrdcQ8BHG1 1161 aa9.8□□□□□ -0.84
Cd44-201ENSMUST00000005218 Tnnt3Q9QZ47 272 aa9.76□□□□□ -0.85
Cd44-201ENSMUST00000005218 Lmod2Q3UHZ5 550 aa9.76□□□□□ -0.85
Cd44-201ENSMUST00000005218 Mapk8ip2Q9ERE9 830 aa9.72□□□□□ -0.85
Cd44-201ENSMUST00000005218 Chic1Q8CBW7 227 aa9.71□□□□□ -0.85
Cd44-201ENSMUST00000005218 Os9Q8K2C7 672 aa9.69□□□□□ -0.86
Cd44-201ENSMUST00000005218 Zbtb7cQ8VCZ7 619 aa9.69□□□□□ -0.86
Cd44-201ENSMUST00000005218 Gm38655A0A286YDK6 273 aa9.67□□□□□ -0.86
Cd44-201ENSMUST00000005218 ClspnQ80YR7 1315 aa9.67□□□□□ -0.86
Cd44-201ENSMUST00000005218 Anp32bQ9EST5 272 aaKnown RBP9.67□□□□□ -0.86
Cd44-201ENSMUST00000005218 Eid3Q3V124 375 aa9.66□□□□□ -0.86
Cd44-201ENSMUST00000005218 Sall2Q9QX96 1004 aa9.66□□□□□ -0.86
Cd44-201ENSMUST00000005218 NeflP08551 543 aa9.65□□□□□ -0.86
Cd44-201ENSMUST00000005218 4933416C03RikQ3V063 378 aa9.65□□□□□ -0.86
Cd44-201ENSMUST00000005218 Dcaf1Q80TR8 1506 aa9.63□□□□□ -0.87
Cd44-201ENSMUST00000005218 Rb1cc1Q9ESK9 1588 aa9.63□□□□□ -0.87
Cd44-201ENSMUST00000005218 Npm1Q61937 292 aaKnown RBP9.62□□□□□ -0.87
Cd44-201ENSMUST00000005218 Cep164Q5DU05 1446 aa9.61□□□□□ -0.87
Cd44-201ENSMUST00000005218 Zbtb4Q5F293 982 aa9.6□□□□□ -0.87
Cd44-201ENSMUST00000005218 Brd4Q9ESU6 1400 aaKnown RBP9.58□□□□□ -0.88
Cd44-201ENSMUST00000005218 Csrnp3P59055 597 aa9.58□□□□□ -0.88
Cd44-201ENSMUST00000005218 Myt1Q8CFC2 1127 aa9.58□□□□□ -0.88
Cd44-201ENSMUST00000005218 Clip1Q922J3 1391 aa9.56□□□□□ -0.88
Cd44-201ENSMUST00000005218 Hnrnpul2Q00PI9 745 aaKnown RBP9.54□□□□□ -0.88
Cd44-201ENSMUST00000005218 Ifnlr1Q8CGK5 535 aa9.52□□□□□ -0.89
Cd44-201ENSMUST00000005218 Anp32aO35381 247 aa9.48□□□□□ -0.89
Cd44-201ENSMUST00000005218 Anks4bQ8K3X6 423 aa9.48□□□□□ -0.89
Cd44-201ENSMUST00000005218 Prdm10Q3UTQ7 1184 aa9.48□□□□□ -0.89
Cd44-201ENSMUST00000005218 Erich6D3Z6S9 713 aa9.46□□□□□ -0.89
Cd44-201ENSMUST00000005218 Fkbp15Q6P9Q6 1216 aaKnown RBP9.46□□□□□ -0.9
Cd44-201ENSMUST00000005218 Chic2Q9D9G3 165 aa9.42□□□□□ -0.9
Cd44-201ENSMUST00000005218 Rtl5Q5DTT4 599 aa9.41□□□□□ -0.9
Cd44-201ENSMUST00000005218 Aebp2Q9Z248 504 aaKnown RBP9.39□□□□□ -0.91
Cd44-201ENSMUST00000005218 Nlrp6Q91WS2 869 aa9.38□□□□□ -0.91
Cd44-201ENSMUST00000005218 Polr3glQ8R0C0 218 aa9.37□□□□□ -0.91
Cd44-201ENSMUST00000005218 ArxO35085 564 aa9.37□□□□□ -0.91
Cd44-201ENSMUST00000005218 DaxxO35613 739 aa9.36□□□□□ -0.91
Cd44-201ENSMUST00000005218 BlmO88700 1416 aa9.36□□□□□ -0.91
Cd44-201ENSMUST00000005218 Atp1b4Q99ME6 356 aa9.36□□□□□ -0.91
Cd44-201ENSMUST00000005218 Baz1aO88379 1555 aa9.35□□□□□ -0.91
Cd44-201ENSMUST00000005218 Ubl4bQ9CQ84 188 aa9.35□□□□□ -0.91
Cd44-201ENSMUST00000005218 Gm13697A2AK42 830 aa9.34□□□□□ -0.91
Cd44-201ENSMUST00000005218 NacadQ5SWP3 1504 aa9.34□□□□□ -0.91
Cd44-201ENSMUST00000005218 Aplp2Q06335 707 aa9.34□□□□□ -0.91
Cd44-201ENSMUST00000005218 Calr4Q3TQS0 420 aa9.34□□□□□ -0.91
Cd44-201ENSMUST00000005218 Ppp4r2Q0VGB7 417 aa9.34□□□□□ -0.91
Cd44-201ENSMUST00000005218 Rad21Q61550 635 aaKnown RBP9.3□□□□□ -0.92
Cd44-201ENSMUST00000005218 Golga3P55937 1487 aa9.3□□□□□ -0.92
Cd44-201ENSMUST00000005218 Setd5Q5XJV7 1441 aa9.3□□□□□ -0.92
Cd44-201ENSMUST00000005218 4930567H17RikQ3V0K5 233 aa9.3□□□□□ -0.92
Cd44-201ENSMUST00000005218 DiexfQ8BTT6 772 aaKnown RBP9.3□□□□□ -0.92
Cd44-201ENSMUST00000005218 Ccer2J3QPU5 274 aa9.29□□□□□ -0.92
Cd44-201ENSMUST00000005218 Rangap1P46061 589 aaKnown RBP9.29□□□□□ -0.92
Cd44-201ENSMUST00000005218 Mrs2Q5NCE8 434 aa9.29□□□□□ -0.92
Cd44-201ENSMUST00000005218 Rsf1E9PWW9 1441 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 84.7 ms