RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 DUSP16Q9BY84 665 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 ULBP1Q9BZM6 244 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 TUBB1Q9H4B7 451 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 ERVK-18Q9QC07 812 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 DNAJB9Q9UBS3 223 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 LIMD1Q9UGP4 676 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 FBXW11Q9UKB1 542 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 ASPDHA6ND91 283 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 TTC34A8MYJ7 566 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 SUPT3HB4E1H0 165 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 UPK1BO75841 260 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 C22orf31O95567 290 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 NPR3P17342 541 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 CDKN2DP55273 166 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 CAMK2BQ13554 666 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 NOMO2Q5JPE7 1267 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 COLEC12Q5KU26 742 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 CELF3Q5SZQ8 465 aaKnown RBP8.45□□□□□ -1.06
CHD2-226ENST00000636881 HID1Q8IV36 788 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 LYSMD2Q8IV50 215 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 ABI1Q8IZP0 508 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 SVOPQ8N4V2 548 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 DTWD1Q8N5C7 304 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 CNIH3Q8TBE1 160 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 DYNC2LI1Q8TCX1 351 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 COPS5Q92905 334 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 ZHX1-C8orf76Q96EF9 292 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 C17orf80Q9BSJ5 609 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 TKTL2Q9H0I9 626 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 TRIT1Q9H3H1 467 aaKnown RBP8.45□□□□□ -1.06
CHD2-226ENST00000636881 MARCH7Q9H992 704 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 WDR6Q9NNW5 1121 aaKnown RBP8.45□□□□□ -1.06
CHD2-226ENST00000636881 RGS18Q9NS28 235 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 DDX28Q9NUL7 540 aaKnown RBP8.45□□□□□ -1.06
CHD2-226ENST00000636881 AIG1Q9NVV5 245 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 SCN3BQ9NY72 215 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 DKK3Q9UBP4 350 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 GINS2Q9Y248 185 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 CRYL1Q9Y2S2 319 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 TPRKBQ9Y3C4 175 aa8.45□□□□□ -1.06
CHD2-226ENST00000636881 MYLKQ15746 1914 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 TSPAN1O60635 241 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 GUCY1B2O75343 617 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 CCNKO75909 580 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 CNTN5O94779 1100 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 INSRRP14616 1297 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 FMO3P31513 532 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 EIF2DP41214 584 aaKnown RBP8.44□□□□□ -1.06
CHD2-226ENST00000636881 CLK1P49759 484 aaKnown RBP8.44□□□□□ -1.06
CHD2-226ENST00000636881 RABGGTBP53611 331 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 MAP3K7CLP57077 242 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 SCAPQ12770 1279 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 NPTX1Q15818 432 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.44□□□□□ -1.06
CHD2-226ENST00000636881 C9orf57Q5W0N0 161 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 ANKRD34AQ69YU3 496 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 TMEM207Q6UWW9 146 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 PRR23BQ6ZRT6 265 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 LACC1Q8IV20 430 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 EID3Q8N140 333 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 SVOPLQ8N434 492 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 PROX1Q92786 737 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 TSGA13Q96PP4 275 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 YME1L1Q96TA2 773 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 ALOXE3Q9BYJ1 711 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 SIK2Q9H0K1 926 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 RBM22Q9NW64 420 aaKnown RBP eCLIP8.44□□□□□ -1.062e-10■■■■■ 39.5
CHD2-226ENST00000636881 PAK1IP1Q9NWT1 392 aaPredicted RBP8.44□□□□□ -1.06
CHD2-226ENST00000636881 INTS6Q9UL03 887 aaKnown RBP8.44□□□□□ -1.06
CHD2-226ENST00000636881 PMF1-BGLAPU3KQ54 211 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 THSD7AQ9UPZ6 1657 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 NRCAMQ92823 1304 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 C19orf81C9J6K1 198 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 I6L893 689 aaPredicted RBP8.44□□□□□ -1.06
CHD2-226ENST00000636881 BCKDKO14874 412 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 AREL1O15033 823 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 BEST1O76090 585 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 MFN2O95140 757 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 FADS2O95864 444 aaKnown RBP8.44□□□□□ -1.06
CHD2-226ENST00000636881 CCDC159P0C7I6 412 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 BMPR1AP36894 532 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 GRIK1P39086 918 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 CASP3P42574 277 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 SLC26A2P50443 739 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 PHC1P78364 1004 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 MRPS15P82914 257 aaKnown RBP8.44□□□□□ -1.06
CHD2-226ENST00000636881 NFKB2Q00653 900 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 TSPY1Q01534 308 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 TRIP4Q15650 581 aaPredicted RBP8.44□□□□□ -1.06
CHD2-226ENST00000636881 ATP6AP1LQ52LC2 224 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 FBXO48Q5FWF7 155 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 NBPF12Q5TAG4 269 aaPredicted RBP8.44□□□□□ -1.06
CHD2-226ENST00000636881 DCAF15Q66K64 600 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 BNIPLQ7Z465 357 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 HEATR4Q86WZ0 1026 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 NIM1KQ8IY84 436 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 SLC47A1Q96FL8 570 aa8.44□□□□□ -1.06
CHD2-226ENST00000636881 C6orf62Q9GZU0 229 aaPredicted RBP8.44□□□□□ -1.06
CHD2-226ENST00000636881 KAT8Q9H7Z6 458 aaKnown RBP8.44□□□□□ -1.06
CHD2-226ENST00000636881 SLC52A3Q9NQ40 469 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms