RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 GAL10P04397 699 aa1.2□□□□□ -2.22
snR53snR53 CDC6P09119 513 aa1.2□□□□□ -2.22
snR53snR53 GAT1P43574 510 aa1.2□□□□□ -2.22
snR53snR53 MTH1P35198 433 aa1.19□□□□□ -2.22
snR53snR53 YMR206WQ03695 313 aa1.19□□□□□ -2.22
snR53snR53 YLR257WQ06146 321 aaKnown RBP1.19□□□□□ -2.22
snR53snR53 TIF6Q12522 245 aaKnown RBP1.19□□□□□ -2.22
snR53snR53 NPR1P22211 790 aa1.18□□□□□ -2.22
snR53snR53 RET1P22276 1149 aaKnown RBP1.18□□□□□ -2.22
snR53snR53 PPZ2P33329 710 aa1.18□□□□□ -2.22
snR53snR53 SPC42P36094 363 aa1.18□□□□□ -2.22
snR53snR53 NTA1P40354 457 aa1.18□□□□□ -2.22
snR53snR53 GTF1P53260 183 aaPredicted RBP1.18□□□□□ -2.22
snR53snR53 GND2P53319 492 aa1.18□□□□□ -2.22
snR53snR53 THI7Q05998 598 aa1.18□□□□□ -2.22
snR53snR53 CMP2P14747 604 aa1.17□□□□□ -2.22
snR53snR53 PFK1P16861 987 aaKnown RBP1.17□□□□□ -2.22
snR53snR53 MCM5P29496 775 aaKnown RBP1.17□□□□□ -2.22
snR53snR53 BPL1P48445 690 aaPredicted RBP1.17□□□□□ -2.22
snR53snR53 PBP1P53297 722 aaKnown RBP1.17□□□□□ -2.22
snR53snR53 DED81P38707 554 aaKnown RBP1.16□□□□□ -2.22
snR53snR53 RAD55P38953 406 aa1.16□□□□□ -2.22
snR53snR53 PSY2P40164 858 aa1.16□□□□□ -2.22
snR53snR53 VPS62P53285 467 aa1.16□□□□□ -2.22
snR53snR53 TDA9Q04545 1251 aa1.16□□□□□ -2.22
snR53snR53 YOL073CQ08232 322 aa1.16□□□□□ -2.22
snR53snR53 STE4P18851 423 aa1.15□□□□□ -2.23
snR53snR53 SRM1P21827 482 aa1.15□□□□□ -2.23
snR53snR53 EMC1P25574 760 aa1.15□□□□□ -2.23
snR53snR53 IRS4P36115 615 aaKnown RBP1.15□□□□□ -2.23
snR53snR53 SUL1P38359 859 aa1.15□□□□□ -2.23
snR53snR53 RIX1P38883 763 aaPredicted RBP1.15□□□□□ -2.23
snR53snR53 PLB1P39105 664 aa1.15□□□□□ -2.23
snR53snR53 SEC26P41810 973 aaKnown RBP1.15□□□□□ -2.23
snR53snR53 GCV2P49095 1034 aa1.15□□□□□ -2.23
snR53snR53 TIM44Q01852 431 aa1.15□□□□□ -2.23
snR53snR53 GAL2P13181 574 aa1.14□□□□□ -2.23
snR53snR53 SIP5P40210 489 aaKnown RBP1.14□□□□□ -2.23
snR53snR53 SUT1P53032 299 aaKnown RBP1.14□□□□□ -2.23
snR53snR53 MRPS35P53292 345 aa1.14□□□□□ -2.23
snR53snR53 OMS1Q06668 471 aa1.14□□□□□ -2.23
snR53snR53 HRK1Q08732 759 aaKnown RBP1.14□□□□□ -2.23
snR53snR53 ACF2Q12168 779 aa1.14□□□□□ -2.23
snR53snR53 SPO21Q12411 609 aa1.14□□□□□ -2.23
snR53snR53 CMR1Q12510 522 aaKnown RBP1.14□□□□□ -2.23
snR53snR53 LEO1P38439 464 aa1.13□□□□□ -2.23
snR53snR53 RIM11P38615 370 aa1.13□□□□□ -2.23
snR53snR53 GPB2P39717 880 aa1.13□□□□□ -2.23
snR53snR53 YJL045WP47052 634 aa1.13□□□□□ -2.23
snR53snR53 RSM24Q03976 319 aa1.13□□□□□ -2.23
snR53snR53 YLR040CQ07988 224 aa1.13□□□□□ -2.23
snR53snR53 TUB1P09733 447 aaKnown RBP1.12□□□□□ -2.23
snR53snR53 TY1A-LR4P0C2I8 440 aaKnown RBP1.12□□□□□ -2.23
snR53snR53 TY1A-DR6P0CX70 440 aa1.12□□□□□ -2.23
snR53snR53 TY1A-ER1P0CX71 440 aa1.12□□□□□ -2.23
snR53snR53 TY1A-LR2P0CX72 440 aa1.12□□□□□ -2.23
snR53snR53 TY1A-PLP0CX73 440 aa1.12□□□□□ -2.23
snR53snR53 TY1A-JR1P0CX74 440 aa1.12□□□□□ -2.23
snR53snR53 TY1A-LR3P0CX75 440 aa1.12□□□□□ -2.23
snR53snR53 TY1A-ML2P0CX76 440 aa1.12□□□□□ -2.23
snR53snR53 ARL1P38116 183 aaKnown RBP1.12□□□□□ -2.23
snR53snR53 YAR028WP39548 234 aa1.12□□□□□ -2.23
snR53snR53 RSP5P39940 809 aaKnown RBP1.12□□□□□ -2.23
snR53snR53 MEP2P41948 499 aa1.12□□□□□ -2.23
snR53snR53 ALD4P46367 519 aaKnown RBP1.12□□□□□ -2.23
snR53snR53 YJL007CP47080 104 aa1.12□□□□□ -2.23
snR53snR53 NOP12Q08208 459 aaKnown RBP1.12□□□□□ -2.23
snR53snR53 VTS1Q08831 523 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
snR53snR53 HMI1Q12039 706 aa1.12□□□□□ -2.23
snR53snR53 TY1A-GR1Q12085 440 aa1.12□□□□□ -2.23
snR53snR53 TY1A-PR3Q6Q5H1 440 aaKnown RBP1.12□□□□□ -2.23
snR53snR53 TY1A-OLQ92392 440 aaKnown RBP1.12□□□□□ -2.23
snR53snR53 RTG2P32608 588 aaKnown RBP1.11□□□□□ -2.23
snR53snR53 FLO10P36170 1169 aa1.11□□□□□ -2.23
snR53snR53 CTR9P89105 1077 aa1.11□□□□□ -2.23
snR53snR53 MUK1Q02866 612 aa1.11□□□□□ -2.23
snR53snR53 RCL1Q08096 367 aaPredicted RBP1.11□□□□□ -2.23
snR53snR53 RSB1Q08417 382 aa1.11□□□□□ -2.23
snR53snR53 SUT2Q12286 268 aa1.11□□□□□ -2.23
snR53snR53 EFT1P32324 842 aaKnown RBP1.1□□□□□ -2.23
snR53snR53 YSC84P32793 468 aa1.1□□□□□ -2.23
snR53snR53 KTR2P33550 425 aa1.1□□□□□ -2.23
snR53snR53 RSA3Q05942 220 aaKnown RBP1.1□□□□□ -2.23
snR53snR53 PRP5P21372 849 aaPredicted RBP1.09□□□□□ -2.23
snR53snR53 ECM2P38241 364 aaKnown RBP1.09□□□□□ -2.23
snR53snR53 SLS1P42900 643 aa1.09□□□□□ -2.23
snR53snR53 MSL5Q12186 476 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
snR53snR53 COBP00163 385 aa1.08□□□□□ -2.24
snR53snR53 DUR3P33413 735 aa1.08□□□□□ -2.24
snR53snR53 CCZ1P38273 704 aa1.08□□□□□ -2.24
snR53snR53 HSE1P38753 452 aa1.08□□□□□ -2.24
snR53snR53 CDC55Q00362 526 aa1.08□□□□□ -2.24
snR53snR53 COQ4O13525 335 aa1.07□□□□□ -2.24
snR53snR53 TDP1P38319 544 aa1.07□□□□□ -2.24
snR53snR53 EXG2P52911 562 aa1.07□□□□□ -2.24
snR53snR53 PUS2P53167 370 aa1.07□□□□□ -2.24
snR53snR53 MPS1P54199 764 aa1.07□□□□□ -2.24
snR53snR53 MRH1Q12117 320 aaPredicted RBP1.07□□□□□ -2.24
snR53snR53 RFC5P38251 354 aa1.06□□□□□ -2.24
snR53snR53 TIF1P10081 395 aaKnown RBP1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms