RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C HEM13P11353 328 aaKnown RBP5.85□□□□□ -1.47
CCL1YPR025C SEG2P34250 1132 aa5.85□□□□□ -1.47
CCL1YPR025C MNR2P35724 969 aa5.85□□□□□ -1.47
CCL1YPR025C REI1P38344 393 aaPredicted RBP5.85□□□□□ -1.47
CCL1YPR025C MRL1Q06815 381 aa5.85□□□□□ -1.47
CCL1YPR025C YLL054CQ12244 843 aa5.85□□□□□ -1.47
CCL1YPR025C VMA4P22203 233 aaKnown RBP5.84□□□□□ -1.47
CCL1YPR025C NEM1P38757 446 aa5.84□□□□□ -1.47
CCL1YPR025C MTR4P47047 1073 aaKnown RBP5.84□□□□□ -1.47
CCL1YPR025C KIP3P53086 805 aaKnown RBP5.84□□□□□ -1.47
CCL1YPR025C CWC24P53769 259 aa5.84□□□□□ -1.47
CCL1YPR025C ALG6Q12001 544 aaKnown RBP5.84□□□□□ -1.47
CCL1YPR025C SEC23P15303 768 aaKnown RBP5.83□□□□□ -1.48
CCL1YPR025C CLN2P20438 545 aa5.83□□□□□ -1.48
CCL1YPR025C RDH54P38086 958 aa5.83□□□□□ -1.48
CCL1YPR025C SEA4P38164 1038 aa5.83□□□□□ -1.48
CCL1YPR025C VPS16Q03308 798 aa5.83□□□□□ -1.48
CCL1YPR025C UTP5Q04177 643 aaKnown RBP5.83□□□□□ -1.48
CCL1YPR025C HDA2Q06629 674 aa5.83□□□□□ -1.48
CCL1YPR025C RTT10Q08924 1013 aa5.83□□□□□ -1.48
CCL1YPR025C PIN2Q12057 282 aa5.83□□□□□ -1.48
CCL1YPR025C MSB1P21339 1137 aaKnown RBP5.82□□□□□ -1.48
CCL1YPR025C RAD27P26793 382 aa5.82□□□□□ -1.48
CCL1YPR025C LRG1P35688 1017 aa5.82□□□□□ -1.48
CCL1YPR025C ARL1P38116 183 aaKnown RBP5.82□□□□□ -1.48
CCL1YPR025C ATG14P38270 344 aa5.82□□□□□ -1.48
CCL1YPR025C VAC8P39968 578 aa5.82□□□□□ -1.48
CCL1YPR025C YNR063WP53749 607 aa5.82□□□□□ -1.48
CCL1YPR025C SDH1Q00711 640 aa5.82□□□□□ -1.48
CCL1YPR025C DED1P06634 604 aaKnown RBP5.81□□□□□ -1.48
CCL1YPR025C CDC34P14682 295 aa5.81□□□□□ -1.48
CCL1YPR025C NIT1P40447 199 aa5.81□□□□□ -1.48
CCL1YPR025C ALD6P54115 500 aaKnown RBP5.81□□□□□ -1.48
CCL1YPR025C EST2Q06163 884 aa5.81□□□□□ -1.48
CCL1YPR025C AVO1Q08236 1176 aa5.81□□□□□ -1.48
CCL1YPR025C YOR223WQ12015 292 aa5.81□□□□□ -1.48
CCL1YPR025C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
CCL1YPR025C TAF13P11747 167 aa5.8□□□□□ -1.48
CCL1YPR025C ADD66P36040 267 aa5.8□□□□□ -1.48
CCL1YPR025C YGR045CP53229 120 aa5.8□□□□□ -1.48
CCL1YPR025C NCE103P53615 221 aa5.8□□□□□ -1.48
CCL1YPR025C DUT1P33317 147 aa5.79□□□□□ -1.48
CCL1YPR025C POL12P38121 705 aaPredicted RBP5.79□□□□□ -1.48
CCL1YPR025C ELA1P53861 379 aaPredicted RBP5.79□□□□□ -1.48
CCL1YPR025C ROD1Q02805 837 aa5.79□□□□□ -1.48
CCL1YPR025C GDE1Q02979 1223 aa5.79□□□□□ -1.48
CCL1YPR025C DOT1Q04089 582 aaKnown RBP5.79□□□□□ -1.48
CCL1YPR025C TMA46Q12000 345 aaKnown RBP5.79□□□□□ -1.48
CCL1YPR025C ECL1P48235 211 aa5.78□□□□□ -1.48
CCL1YPR025C GNP1P48813 663 aa5.78□□□□□ -1.48
CCL1YPR025C SIW14P53965 281 aa5.78□□□□□ -1.48
CCL1YPR025C GPT2P36148 743 aa5.77□□□□□ -1.49
CCL1YPR025C YAR028WP39548 234 aa5.77□□□□□ -1.49
CCL1YPR025C FAA4P47912 694 aaKnown RBP5.77□□□□□ -1.49
CCL1YPR025C PRP43P53131 767 aaKnown RBP5.77□□□□□ -1.49
CCL1YPR025C LAP2Q10740 671 aa5.77□□□□□ -1.49
CCL1YPR025C HXT13P39924 564 aa5.76□□□□□ -1.49
CCL1YPR025C HXT17P53631 564 aa5.76□□□□□ -1.49
CCL1YPR025C HXT15P54854 567 aa5.76□□□□□ -1.49
CCL1YPR025C ESC8Q08119 714 aa5.76□□□□□ -1.49
CCL1YPR025C MKK2P32491 506 aa5.75□□□□□ -1.49
CCL1YPR025C RER2P35196 286 aa5.75□□□□□ -1.49
CCL1YPR025C YGR053CP53234 283 aa5.75□□□□□ -1.49
CCL1YPR025C GIS1Q03833 894 aa5.75□□□□□ -1.49
CCL1YPR025C RKM2Q03942 479 aa5.75□□□□□ -1.49
CCL1YPR025C DFG16Q99234 619 aa5.75□□□□□ -1.49
CCL1YPR025C RAT1Q02792 1006 aaKnown RBP5.74□□□□□ -1.49
CCL1YPR025C EEB1Q02891 456 aa5.74□□□□□ -1.49
CCL1YPR025C GIC2Q06648 383 aa5.74□□□□□ -1.49
CCL1YPR025C PRI2P20457 528 aa5.73□□□□□ -1.49
CCL1YPR025C GAS1P22146 559 aaKnown RBP5.73□□□□□ -1.49
CCL1YPR025C RET1P22276 1149 aaKnown RBP5.73□□□□□ -1.49
CCL1YPR025C SYP1P25623 870 aaKnown RBP5.73□□□□□ -1.49
CCL1YPR025C AFG2P32794 780 aa5.73□□□□□ -1.49
CCL1YPR025C HSE1P38753 452 aa5.73□□□□□ -1.49
CCL1YPR025C MSH4P40965 878 aaPredicted RBP5.73□□□□□ -1.49
CCL1YPR025C ENT3P47160 408 aa5.73□□□□□ -1.49
CCL1YPR025C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
CCL1YPR025C WRS1Q12109 432 aaKnown RBP5.73□□□□□ -1.49
CCL1YPR025C GCD1P09032 578 aaPredicted RBP5.72□□□□□ -1.49
CCL1YPR025C NFS1P25374 497 aa5.72□□□□□ -1.49
CCL1YPR025C TYW3P53177 273 aa5.72□□□□□ -1.49
CCL1YPR025C PTC5Q12511 572 aa5.72□□□□□ -1.49
CCL1YPR025C TRP2P00899 507 aaKnown RBP5.71□□□□□ -1.5
CCL1YPR025C RPS4AP0CX35 261 aaKnown RBP5.71□□□□□ -1.5
CCL1YPR025C RPS4BP0CX36 261 aaKnown RBP5.71□□□□□ -1.5
CCL1YPR025C BAS1P22035 811 aa5.71□□□□□ -1.5
CCL1YPR025C LYP1P32487 611 aa5.71□□□□□ -1.5
CCL1YPR025C NNK1P36003 928 aa5.71□□□□□ -1.5
CCL1YPR025C ALG3P38179 458 aa5.71□□□□□ -1.5
CCL1YPR025C OPI10Q08202 246 aa5.71□□□□□ -1.5
CCL1YPR025C FAL1Q12099 399 aaKnown RBP5.71□□□□□ -1.5
CCL1YPR025C SMY2P32909 740 aaKnown RBP5.7□□□□□ -1.5
CCL1YPR025C QNS1P38795 714 aaKnown RBP5.7□□□□□ -1.5
CCL1YPR025C NMD3P38861 518 aaKnown RBP5.7□□□□□ -1.5
CCL1YPR025C TAF1P46677 1066 aa5.7□□□□□ -1.5
CCL1YPR025C VPS53P47061 822 aa5.7□□□□□ -1.5
CCL1YPR025C TIF35Q04067 274 aaKnown RBP5.7□□□□□ -1.5
CCL1YPR025C RSA3Q05942 220 aaKnown RBP5.7□□□□□ -1.5
CCL1YPR025C YLR257WQ06146 321 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms