RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W FYV10P40492 516 aa4.15□□□□□ -1.74
MSD1YPL104W VID28P40547 921 aa4.15□□□□□ -1.74
MSD1YPL104W IOC3P43596 787 aa4.15□□□□□ -1.74
MSD1YPL104W ISM1P48526 1002 aa4.15□□□□□ -1.74
MSD1YPL104W CTF18P49956 741 aa4.15□□□□□ -1.74
MSD1YPL104W PEX14P53112 341 aa4.15□□□□□ -1.74
MSD1YPL104W YGL081WP53156 320 aa4.15□□□□□ -1.74
MSD1YPL104W JIP4Q03361 876 aa4.15□□□□□ -1.74
MSD1YPL104W AGE1Q04412 482 aa4.15□□□□□ -1.74
MSD1YPL104W HRQ1Q05549 1077 aa4.15□□□□□ -1.74
MSD1YPL104W UTP13Q05946 817 aaKnown RBP4.15□□□□□ -1.74
MSD1YPL104W ESF1Q06344 628 aaKnown RBP4.15□□□□□ -1.74
MSD1YPL104W GRX6Q12438 231 aa4.15□□□□□ -1.74
MSD1YPL104W MATALPHA2P0CY08 210 aa4.14□□□□□ -1.75
MSD1YPL104W HMLALPHA2P0CY09 210 aa4.14□□□□□ -1.75
MSD1YPL104W LCB1P25045 558 aaKnown RBP4.14□□□□□ -1.75
MSD1YPL104W MCM2P29469 868 aa4.14□□□□□ -1.75
MSD1YPL104W IMP2'P32351 346 aa4.14□□□□□ -1.75
MSD1YPL104W PRX1P34227 261 aaKnown RBP4.14□□□□□ -1.75
MSD1YPL104W YKL222CP35995 705 aa4.14□□□□□ -1.75
MSD1YPL104W PTK1P36002 662 aaPredicted RBP4.14□□□□□ -1.75
MSD1YPL104W BOI1P38041 980 aaKnown RBP4.14□□□□□ -1.75
MSD1YPL104W ARL1P38116 183 aaKnown RBP4.14□□□□□ -1.75
MSD1YPL104W ERT1P38140 529 aa4.14□□□□□ -1.75
MSD1YPL104W HYR1P40581 163 aaKnown RBP4.14□□□□□ -1.75
MSD1YPL104W APL6P46682 809 aa4.14□□□□□ -1.75
MSD1YPL104W YKE2P52553 114 aa4.14□□□□□ -1.75
MSD1YPL104W ALD6P54115 500 aaKnown RBP4.14□□□□□ -1.75
MSD1YPL104W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.14□□□□□ -1.75not detected
MSD1YPL104W RAM1P22007 431 aa4.14□□□□□ -1.75
MSD1YPL104W GCD11P32481 527 aaKnown RBP4.14□□□□□ -1.75
MSD1YPL104W SRP40P32583 406 aaPredicted RBP4.14□□□□□ -1.75
MSD1YPL104W FBP26P32604 452 aa4.14□□□□□ -1.75
MSD1YPL104W RPT3P33298 428 aaKnown RBP4.14□□□□□ -1.75
MSD1YPL104W MDL2P33311 773 aa4.14□□□□□ -1.75
MSD1YPL104W YHL017WP38745 532 aa4.14□□□□□ -1.75
MSD1YPL104W CRG1P38892 291 aaRIP-Chip data4.14□□□□□ -1.75not detected
MSD1YPL104W SLN1P39928 1220 aaPredicted RBP4.14□□□□□ -1.75
MSD1YPL104W YFH7P43591 353 aa4.14□□□□□ -1.75
MSD1YPL104W STR2P47164 639 aa4.14□□□□□ -1.75
MSD1YPL104W SPN1Q06505 410 aaPredicted RBP4.14□□□□□ -1.75
MSD1YPL104W YPR097WQ06839 1073 aa4.14□□□□□ -1.75
MSD1YPL104W PSK2Q08217 1101 aa4.14□□□□□ -1.75
MSD1YPL104W ALR1Q08269 859 aa4.14□□□□□ -1.75
MSD1YPL104W PPM2Q08282 695 aa4.14□□□□□ -1.75
MSD1YPL104W ELG1Q12050 791 aa4.14□□□□□ -1.75
MSD1YPL104W TRS33Q99394 268 aa4.14□□□□□ -1.75
MSD1YPL104W CPA2P03965 1118 aaKnown RBP4.13□□□□□ -1.75
MSD1YPL104W MIP1P15801 1254 aa4.13□□□□□ -1.75
MSD1YPL104W PPG1P32838 368 aa4.13□□□□□ -1.75
MSD1YPL104W JJJ2P46997 583 aa4.13□□□□□ -1.75
MSD1YPL104W PEX19Q07418 342 aa4.13□□□□□ -1.75
MSD1YPL104W COQ1P18900 473 aa4.13□□□□□ -1.75
MSD1YPL104W RER2P35196 286 aa4.13□□□□□ -1.75
MSD1YPL104W MAD1P40957 749 aa4.13□□□□□ -1.75
MSD1YPL104W CIR1P42940 261 aa4.13□□□□□ -1.75
MSD1YPL104W PIP2P52960 996 aa4.13□□□□□ -1.75
MSD1YPL104W UFD2P54860 961 aa4.13□□□□□ -1.75
MSD1YPL104W SPR28Q04921 423 aa4.13□□□□□ -1.75
MSD1YPL104W EST2Q06163 884 aa4.13□□□□□ -1.75
MSD1YPL104W TOS4Q06266 489 aa4.13□□□□□ -1.75
MSD1YPL104W WRS1Q12109 432 aaKnown RBP4.13□□□□□ -1.75
MSD1YPL104W YPL150WQ12152 901 aa4.13□□□□□ -1.75
MSD1YPL104W LSO1Q3E827 93 aa4.13□□□□□ -1.75
MSD1YPL104W CTT1P06115 562 aa4.12□□□□□ -1.75
MSD1YPL104W ARG82P07250 355 aa4.12□□□□□ -1.75
MSD1YPL104W SNF3P10870 884 aa4.12□□□□□ -1.75
MSD1YPL104W RET1P22276 1149 aaKnown RBP4.12□□□□□ -1.75
MSD1YPL104W SUV3P32580 737 aa4.12□□□□□ -1.75
MSD1YPL104W RPT1P33299 467 aaKnown RBP4.12□□□□□ -1.75
MSD1YPL104W RVS167P39743 482 aaKnown RBP4.12□□□□□ -1.75
MSD1YPL104W RSM25P40496 264 aa4.12□□□□□ -1.75
MSD1YPL104W BUD6P41697 788 aa4.12□□□□□ -1.75
MSD1YPL104W EAF6P47128 113 aa4.12□□□□□ -1.75
MSD1YPL104W ENT3P47160 408 aa4.12□□□□□ -1.75
MSD1YPL104W ISR1Q06098 443 aaKnown RBP4.12□□□□□ -1.75
MSD1YPL104W GPI13Q07830 1017 aa4.12□□□□□ -1.75
MSD1YPL104W GSC2P40989 1895 aa4.12□□□□□ -1.75
MSD1YPL104W TY1A-DR4O74302 440 aa4.11□□□□□ -1.75
MSD1YPL104W PDC1P06169 563 aaKnown RBP4.11□□□□□ -1.75
MSD1YPL104W TY1A-HP0C2I4 478 aaKnown RBP4.11□□□□□ -1.75
MSD1YPL104W TY1A-AP0CX57 440 aa4.11□□□□□ -1.75
MSD1YPL104W TY1A-PR1P0CX58 440 aa4.11□□□□□ -1.75
MSD1YPL104W TY1A-ORP0CX59 440 aa4.11□□□□□ -1.75
MSD1YPL104W TY1A-PR2P0CX60 440 aa4.11□□□□□ -1.75
MSD1YPL104W TY1A-DR5P0CX65 440 aa4.11□□□□□ -1.75
MSD1YPL104W TY1A-ER2P0CX66 440 aa4.11□□□□□ -1.75
MSD1YPL104W TY1A-GR3P0CX67 440 aa4.11□□□□□ -1.75
MSD1YPL104W TY1A-LR1P0CX68 440 aa4.11□□□□□ -1.75
MSD1YPL104W TY1A-MR2P0CX69 440 aa4.11□□□□□ -1.75
MSD1YPL104W SEC2P17065 759 aa4.11□□□□□ -1.75
MSD1YPL104W YKL091CP33324 310 aaKnown RBP4.11□□□□□ -1.75
MSD1YPL104W IXR1P33417 597 aa4.11□□□□□ -1.75
MSD1YPL104W RTS1P38903 757 aa4.11□□□□□ -1.75
MSD1YPL104W YER156CP40093 338 aaKnown RBP4.11□□□□□ -1.75
MSD1YPL104W TY1A-JR2P47099 440 aa4.11□□□□□ -1.75
MSD1YPL104W RPS15Q01855 142 aaKnown RBP4.11□□□□□ -1.75
MSD1YPL104W PRP42Q03776 544 aaKnown RBP4.11□□□□□ -1.75
MSD1YPL104W TY1A-DR1Q03856 440 aa4.11□□□□□ -1.75
MSD1YPL104W TY1A-ML1Q04706 440 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms