RNA–Protein interactions for RNA: YOR259C

RPT4, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT4YOR259C CDC16P09798 840 aa6.22□□□□□ -1.41
RPT4YOR259C TRL1P09880 827 aaKnown RBP6.22□□□□□ -1.41
RPT4YOR259C SWC3P31376 625 aa6.22□□□□□ -1.41
RPT4YOR259C TGL4P36165 910 aa6.22□□□□□ -1.41
RPT4YOR259C BOI2P39969 1040 aa6.22□□□□□ -1.41
RPT4YOR259C HYR1P40581 163 aaKnown RBP6.22□□□□□ -1.41
RPT4YOR259C LYS4P49367 693 aaPredicted RBP6.22□□□□□ -1.41
RPT4YOR259C ACS2P52910 683 aaKnown RBP6.22□□□□□ -1.41
RPT4YOR259C KRE33P53914 1056 aaKnown RBP6.22□□□□□ -1.41
RPT4YOR259C PEX19Q07418 342 aa6.22□□□□□ -1.41
RPT4YOR259C GAL2P13181 574 aa6.21□□□□□ -1.42
RPT4YOR259C RAD26P40352 1085 aa6.21□□□□□ -1.42
RPT4YOR259C ROG3P43602 733 aa6.21□□□□□ -1.42
RPT4YOR259C STU2P46675 888 aa6.21□□□□□ -1.42
RPT4YOR259C YJR008WP47085 338 aa6.21□□□□□ -1.42
RPT4YOR259C TIM50Q02776 476 aa6.21□□□□□ -1.42
RPT4YOR259C RMD1Q03441 430 aa6.21□□□□□ -1.42
RPT4YOR259C YPQ2Q06328 317 aa6.21□□□□□ -1.42
RPT4YOR259C TY1A-DR3Q12441 440 aa6.21□□□□□ -1.42
RPT4YOR259C SES1P07284 462 aaKnown RBP6.2□□□□□ -1.42
RPT4YOR259C HAP4P14064 554 aa6.2□□□□□ -1.42
RPT4YOR259C GCD7P32502 381 aaPredicted RBP6.2□□□□□ -1.42
RPT4YOR259C SLA1P32790 1244 aa6.2□□□□□ -1.42
RPT4YOR259C SER1P33330 395 aaKnown RBP6.2□□□□□ -1.42
RPT4YOR259C MRPL10P36520 322 aa6.2□□□□□ -1.42
RPT4YOR259C AHP1P38013 176 aaKnown RBP6.2□□□□□ -1.42
RPT4YOR259C TCD1P38756 429 aa6.2□□□□□ -1.42
RPT4YOR259C YGL082WP53155 381 aa6.2□□□□□ -1.42
RPT4YOR259C SSL2Q00578 843 aa6.2□□□□□ -1.42
RPT4YOR259C TY1A-MR1Q04215 440 aa6.2□□□□□ -1.42
RPT4YOR259C NYV1Q12255 253 aa6.2□□□□□ -1.42
RPT4YOR259C SFI1Q12369 946 aa6.2□□□□□ -1.42
RPT4YOR259C LTV1P34078 463 aa6.19□□□□□ -1.42
RPT4YOR259C MNR2P35724 969 aa6.19□□□□□ -1.42
RPT4YOR259C ALA1P40825 983 aaKnown RBP6.19□□□□□ -1.42
RPT4YOR259C JJJ2P46997 583 aa6.19□□□□□ -1.42
RPT4YOR259C NAM8Q00539 523 aaKnown RBP6.19□□□□□ -1.42
RPT4YOR259C FPR4Q06205 392 aaPredicted RBP6.19□□□□□ -1.42
RPT4YOR259C BUG1Q12191 341 aa6.19□□□□□ -1.42
RPT4YOR259C LPD1P09624 499 aaKnown RBP6.18□□□□□ -1.42
RPT4YOR259C RPL19AP0CX82 189 aaKnown RBP6.18□□□□□ -1.42
RPT4YOR259C RPL19BP0CX83 189 aaPredicted RBP6.18□□□□□ -1.42
RPT4YOR259C PBY1P38254 753 aa6.18□□□□□ -1.42
RPT4YOR259C CCT5P40413 562 aaKnown RBP6.18□□□□□ -1.42
RPT4YOR259C SMC3P47037 1230 aa6.18□□□□□ -1.42
RPT4YOR259C CTH1P47976 325 aa6.18□□□□□ -1.42
RPT4YOR259C UBP15P50101 1230 aa6.18□□□□□ -1.42
RPT4YOR259C PEX14P53112 341 aa6.18□□□□□ -1.42
RPT4YOR259C PKH1Q03407 766 aa6.18□□□□□ -1.42
RPT4YOR259C CCP1P00431 361 aa6.17□□□□□ -1.42
RPT4YOR259C CYT1P07143 309 aa6.17□□□□□ -1.42
RPT4YOR259C MCM1P11746 286 aa6.17□□□□□ -1.42
RPT4YOR259C TAF13P11747 167 aa6.17□□□□□ -1.42
RPT4YOR259C PRX1P34227 261 aaKnown RBP6.17□□□□□ -1.42
RPT4YOR259C MPE1P35728 441 aaKnown RBP6.17□□□□□ -1.42
RPT4YOR259C NPR3P38742 1146 aa6.17□□□□□ -1.42
RPT4YOR259C UBP12P39538 1254 aa6.17□□□□□ -1.42
RPT4YOR259C ECM23Q02710 187 aa6.17□□□□□ -1.42
RPT4YOR259C FCP1Q03254 732 aa6.17□□□□□ -1.42
RPT4YOR259C SGD1Q06132 899 aa6.17□□□□□ -1.42
RPT4YOR259C TRS33Q99394 268 aa6.17□□□□□ -1.42
RPT4YOR259C SSA4P22202 642 aaKnown RBP6.16□□□□□ -1.42
RPT4YOR259C PUP1P25043 261 aa6.16□□□□□ -1.42
RPT4YOR259C SHM1P37292 490 aaPredicted RBP6.16□□□□□ -1.42
RPT4YOR259C ROM1P53046 1155 aa6.16□□□□□ -1.42
RPT4YOR259C UTP22P53254 1237 aaPredicted RBP6.16□□□□□ -1.42
RPT4YOR259C RIM20Q12033 661 aa6.16□□□□□ -1.42
RPT4YOR259C PDR18P53756 1333 aa6.16□□□□□ -1.42
RPT4YOR259C FRS2P15625 503 aaKnown RBP6.15□□□□□ -1.43
RPT4YOR259C ATE1P16639 503 aa6.15□□□□□ -1.43
RPT4YOR259C CEP3P40969 608 aa6.15□□□□□ -1.43
RPT4YOR259C ENT3P47160 408 aa6.15□□□□□ -1.43
RPT4YOR259C ALD2P47771 506 aa6.15□□□□□ -1.43
RPT4YOR259C CTF18P49956 741 aa6.15□□□□□ -1.43
RPT4YOR259C VPS60Q03390 229 aa6.15□□□□□ -1.43
RPT4YOR259C ETT1Q08421 412 aaKnown RBP6.15□□□□□ -1.43
RPT4YOR259C IRE1P32361 1115 aa6.14□□□□□ -1.43
RPT4YOR259C ELM1P32801 640 aa6.14□□□□□ -1.43
RPT4YOR259C AAP1P37898 856 aaKnown RBP6.14□□□□□ -1.43
RPT4YOR259C ECM21P38167 1117 aaKnown RBP6.14□□□□□ -1.43
RPT4YOR259C CIN4P39110 191 aa6.14□□□□□ -1.43
RPT4YOR259C PSH1Q12161 406 aa6.14□□□□□ -1.43
RPT4YOR259C NCB2Q92317 146 aa6.14□□□□□ -1.43
RPT4YOR259C PMD1P32634 1753 aa6.13□□□□□ -1.43
RPT4YOR259C SSK22P25390 1331 aaPredicted RBP6.13□□□□□ -1.43
RPT4YOR259C TOS1P38288 455 aa6.13□□□□□ -1.43
RPT4YOR259C RAT1Q02792 1006 aaKnown RBP6.13□□□□□ -1.43
RPT4YOR259C MTC5Q03897 1148 aa6.13□□□□□ -1.43
RPT4YOR259C RIX7Q07844 837 aaKnown RBP6.13□□□□□ -1.43
RPT4YOR259C CTI6Q08923 506 aa6.13□□□□□ -1.43
RPT4YOR259C SAC3P46674 1301 aa6.12□□□□□ -1.43
RPT4YOR259C CPA2P03965 1118 aaKnown RBP6.12□□□□□ -1.43
RPT4YOR259C MBR1P23493 339 aa6.12□□□□□ -1.43
RPT4YOR259C UBX7P38349 436 aa6.12□□□□□ -1.43
RPT4YOR259C SSF1P38789 453 aaPredicted RBP6.12□□□□□ -1.43
RPT4YOR259C ALD3P54114 506 aa6.12□□□□□ -1.43
RPT4YOR259C VMS1Q04311 632 aaKnown RBP6.12□□□□□ -1.43
RPT4YOR259C HPF1Q05164 967 aa6.12□□□□□ -1.43
RPT4YOR259C BRE1Q07457 700 aaKnown RBP6.12□□□□□ -1.43
RPT4YOR259C HAT1Q12341 374 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms