RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W LSC2P53312 427 aa6.5□□□□□ -1.37
VPS5YOR069W ADE16P54113 591 aaKnown RBP6.5□□□□□ -1.37
VPS5YOR069W FCP1Q03254 732 aa6.5□□□□□ -1.37
VPS5YOR069W SOV1Q04748 898 aa6.5□□□□□ -1.37
VPS5YOR069W DPL1Q05567 589 aa6.5□□□□□ -1.37
VPS5YOR069W SPN1Q06505 410 aaPredicted RBP6.5□□□□□ -1.37
VPS5YOR069W RSF2P46974 1380 aa6.5□□□□□ -1.37
VPS5YOR069W ARG4P04076 463 aaPredicted RBP6.5□□□□□ -1.37
VPS5YOR069W TOM70P07213 617 aaKnown RBP6.5□□□□□ -1.37
VPS5YOR069W PIF1P07271 859 aa6.5□□□□□ -1.37
VPS5YOR069W SWI4P25302 1093 aaKnown RBP6.5□□□□□ -1.37
VPS5YOR069W PDC6P26263 563 aaKnown RBP6.5□□□□□ -1.37
VPS5YOR069W BUD14P27637 709 aa6.5□□□□□ -1.37
VPS5YOR069W RER2P35196 286 aa6.5□□□□□ -1.37
VPS5YOR069W SIP3P38717 1229 aa6.5□□□□□ -1.37
VPS5YOR069W VFA1P40080 203 aa6.5□□□□□ -1.37
VPS5YOR069W ENP2P48234 707 aaKnown RBP6.5□□□□□ -1.37
VPS5YOR069W HFM1P51979 1187 aa6.5□□□□□ -1.37
VPS5YOR069W CUS1Q02554 436 aaPredicted RBP6.5□□□□□ -1.37
VPS5YOR069W POB3Q04636 552 aaKnown RBP6.5□□□□□ -1.37
VPS5YOR069W MMR1Q06324 491 aa6.5□□□□□ -1.37
VPS5YOR069W PSR2Q07949 397 aa6.5□□□□□ -1.37
VPS5YOR069W SNU66Q12420 587 aaPredicted RBP6.5□□□□□ -1.37
VPS5YOR069W UTP10P42945 1769 aaKnown RBP6.49□□□□□ -1.37
VPS5YOR069W MAK11P20484 414 aaKnown RBP6.49□□□□□ -1.37
VPS5YOR069W PSO2P30620 661 aa6.49□□□□□ -1.37
VPS5YOR069W LOS1P33418 1100 aaPredicted RBP6.49□□□□□ -1.37
VPS5YOR069W BMH2P34730 273 aaKnown RBP6.49□□□□□ -1.37
VPS5YOR069W BCD1P38772 366 aa6.49□□□□□ -1.37
VPS5YOR069W MSB3P48566 633 aaPredicted RBP6.49□□□□□ -1.37
VPS5YOR069W ZPR1P53303 486 aaKnown RBP6.49□□□□□ -1.37
VPS5YOR069W UBP16Q02863 499 aa6.49□□□□□ -1.37
VPS5YOR069W TFB2Q02939 513 aa6.49□□□□□ -1.37
VPS5YOR069W MTC5Q03897 1148 aa6.49□□□□□ -1.37
VPS5YOR069W UBX2Q04228 584 aa6.49□□□□□ -1.37
VPS5YOR069W VTI1Q04338 217 aa6.49□□□□□ -1.37
VPS5YOR069W YLR271WQ06152 274 aa6.49□□□□□ -1.37
VPS5YOR069W YLR177WQ06251 628 aa6.49□□□□□ -1.37
VPS5YOR069W PTC5Q12511 572 aa6.49□□□□□ -1.37
VPS5YOR069W MCM3P24279 971 aaKnown RBP6.49□□□□□ -1.37
VPS5YOR069W CLB4P24871 460 aa6.49□□□□□ -1.37
VPS5YOR069W SPP381P38282 291 aaPredicted RBP6.49□□□□□ -1.37
VPS5YOR069W AIP1P46680 615 aaKnown RBP6.49□□□□□ -1.37
VPS5YOR069W YMR114CQ04471 368 aaKnown RBP6.49□□□□□ -1.37
VPS5YOR069W SPP382Q06411 708 aaPredicted RBP6.49□□□□□ -1.37
VPS5YOR069W YPR204WQ08995 1032 aa6.49□□□□□ -1.37
VPS5YOR069W TAH18Q12181 623 aa6.49□□□□□ -1.37
VPS5YOR069W PPR1P07272 904 aaPredicted RBP6.48□□□□□ -1.37
VPS5YOR069W GCD2P12754 651 aaPredicted RBP6.48□□□□□ -1.37
VPS5YOR069W SQT1P35184 431 aa6.48□□□□□ -1.37
VPS5YOR069W TDA3P38758 523 aa6.48□□□□□ -1.37
VPS5YOR069W VPS53P47061 822 aa6.48□□□□□ -1.37
VPS5YOR069W YPL109CQ02981 657 aa6.48□□□□□ -1.37
VPS5YOR069W RMT2Q03305 412 aa6.48□□□□□ -1.37
VPS5YOR069W URH1Q04179 340 aa6.48□□□□□ -1.37
VPS5YOR069W ERV41Q04651 352 aa6.48□□□□□ -1.37
VPS5YOR069W MRD1Q06106 887 aaKnown RBP6.48□□□□□ -1.37
VPS5YOR069W SLP1Q12232 587 aa6.48□□□□□ -1.37
VPS5YOR069W NBL1Q3E7Y6 73 aa6.48□□□□□ -1.37
VPS5YOR069W KAR3P17119 729 aa6.47□□□□□ -1.37
VPS5YOR069W OSM1P21375 501 aaKnown RBP6.47□□□□□ -1.37
VPS5YOR069W RPC25P35718 212 aa6.47□□□□□ -1.37
VPS5YOR069W OAF3P36023 863 aa6.47□□□□□ -1.37
VPS5YOR069W CCT2P39076 527 aaKnown RBP6.47□□□□□ -1.37
VPS5YOR069W IES1P43579 692 aa6.47□□□□□ -1.37
VPS5YOR069W GTR1Q00582 310 aa6.47□□□□□ -1.37
VPS5YOR069W BET4Q00618 327 aa6.47□□□□□ -1.37
VPS5YOR069W RRP15Q06511 250 aaPredicted RBP6.47□□□□□ -1.37
VPS5YOR069W APL5Q08951 932 aaKnown RBP6.47□□□□□ -1.37
VPS5YOR069W CWC2Q12046 339 aaPredicted RBP6.47□□□□□ -1.37
VPS5YOR069W GFA1P14742 717 aaKnown RBP6.47□□□□□ -1.37
VPS5YOR069W IME1P21190 360 aa6.47□□□□□ -1.37
VPS5YOR069W CDC11P32458 415 aa6.47□□□□□ -1.37
VPS5YOR069W GCG1P32656 232 aaKnown RBP6.47□□□□□ -1.37
VPS5YOR069W GRX7P38068 203 aa6.47□□□□□ -1.37
VPS5YOR069W YIL001WP40560 513 aa6.47□□□□□ -1.37
VPS5YOR069W SPC24Q04477 213 aa6.47□□□□□ -1.37
VPS5YOR069W CSR1Q06705 408 aaKnown RBP6.47□□□□□ -1.37
VPS5YOR069W RRI2Q12348 645 aa6.47□□□□□ -1.37
VPS5YOR069W HIS4P00815 799 aaKnown RBP6.46□□□□□ -1.38
VPS5YOR069W PRP4P20053 465 aaKnown RBP6.46□□□□□ -1.38
VPS5YOR069W VAN1P23642 535 aa6.46□□□□□ -1.38
VPS5YOR069W PRP45P28004 379 aaPredicted RBP6.46□□□□□ -1.38
VPS5YOR069W HIR1P32479 840 aa6.46□□□□□ -1.38
VPS5YOR069W TFC3P34111 1160 aa6.46□□□□□ -1.38
VPS5YOR069W MFM1Q02783 413 aa6.46□□□□□ -1.38
VPS5YOR069W OPY2Q06810 360 aa6.46□□□□□ -1.38
VPS5YOR069W SSP2Q08646 371 aa6.46□□□□□ -1.38
VPS5YOR069W SSA2P10592 639 aaKnown RBP6.45□□□□□ -1.38
VPS5YOR069W HXT1P32465 570 aa6.45□□□□□ -1.38
VPS5YOR069W HEK2P38199 381 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
VPS5YOR069W UBP14P38237 781 aaKnown RBP6.45□□□□□ -1.38
VPS5YOR069W MAG2Q06436 670 aaKnown RBP6.45□□□□□ -1.38
VPS5YOR069W YOL075CQ08234 1294 aa6.45□□□□□ -1.38
VPS5YOR069W PPM2Q08282 695 aa6.45□□□□□ -1.38
VPS5YOR069W NOB1Q08444 459 aaKnown RBP6.45□□□□□ -1.38
VPS5YOR069W TCB1Q12466 1186 aa6.45□□□□□ -1.38
VPS5YOR069W PYC1P11154 1178 aaKnown RBP6.45□□□□□ -1.38
VPS5YOR069W LYS14P40971 790 aa6.45□□□□□ -1.38
VPS5YOR069W TMA22P47089 198 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms