RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRF5	YNL299W	YKL091C	P33324	310 aa	Known RBP	5.03	□□□□□ -1.6
TRF5	YNL299W	PET112	P33893	541 aa		5.03	□□□□□ -1.6
TRF5	YNL299W	YJL049W	P47048	450 aa		5.03	□□□□□ -1.6
TRF5	YNL299W	ITC1	P53125	1264 aa		5.03	□□□□□ -1.6
TRF5	YNL299W	PAP2	P53632	584 aa	Known RBP	5.03	□□□□□ -1.6
TRF5	YNL299W	RPN4	Q03465	531 aa		5.03	□□□□□ -1.6
TRF5	YNL299W	IMH1	Q06704	911 aa	Known RBP	5.03	□□□□□ -1.6
TRF5	YNL299W	Q0182	Q9ZZW1	134 aa		5.03	□□□□□ -1.6
TRF5	YNL299W	CDC4	P07834	779 aa		5.02	□□□□□ -1.61
TRF5	YNL299W	MSN1	P22148	382 aa		5.02	□□□□□ -1.61
TRF5	YNL299W	LDH1	P38139	375 aa		5.02	□□□□□ -1.61
TRF5	YNL299W	RAD55	P38953	406 aa		5.02	□□□□□ -1.61
TRF5	YNL299W	NTA1	P40354	457 aa		5.02	□□□□□ -1.61
TRF5	YNL299W	AIR1	P40507	360 aa	Known RBP	5.02	□□□□□ -1.61
TRF5	YNL299W	BUD6	P41697	788 aa		5.02	□□□□□ -1.61
TRF5	YNL299W	INP54	Q08227	384 aa	Known RBP	5.02	□□□□□ -1.61
TRF5	YNL299W	WRS1	Q12109	432 aa	Known RBP	5.02	□□□□□ -1.61
TRF5	YNL299W	AKL1	P38080	1108 aa	Known RBP	5.01	□□□□□ -1.61
TRF5	YNL299W	QDR2	P40474	542 aa		5.01	□□□□□ -1.61
TRF5	YNL299W	DSD1	P53095	428 aa		5.01	□□□□□ -1.61
TRF5	YNL299W	TIF6	Q12522	245 aa	Known RBP	5.01	□□□□□ -1.61
TRF5	YNL299W	RPS31	P05759	152 aa	Known RBP	5.01	□□□□□ -1.61
TRF5	YNL299W	MLF3	P32047	452 aa		5.01	□□□□□ -1.61
TRF5	YNL299W	ALG12	P53730	551 aa		5.01	□□□□□ -1.61
TRF5	YNL299W	DAL4	Q04895	635 aa		5.01	□□□□□ -1.61
TRF5	YNL299W	ROM2	P51862	1356 aa	Known RBP	5.01	□□□□□ -1.61
TRF5	YNL299W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
TRF5	YNL299W	AFT1	P22149	690 aa		5	□□□□□ -1.61
TRF5	YNL299W	PRE9	P23638	258 aa	Known RBP	5	□□□□□ -1.61
TRF5	YNL299W	IRS4	P36115	615 aa	Known RBP	5	□□□□□ -1.61
TRF5	YNL299W	DYS1	P38791	387 aa		5	□□□□□ -1.61
TRF5	YNL299W	BDF2	Q07442	638 aa		5	□□□□□ -1.61
TRF5	YNL299W	NOP58	Q12499	511 aa	Known RBP	5	□□□□□ -1.61
TRF5	YNL299W	FLP1	P03870	423 aa		4.99	□□□□□ -1.61
TRF5	YNL299W	PPG1	P32838	368 aa		4.99	□□□□□ -1.61
TRF5	YNL299W	DUT1	P33317	147 aa		4.99	□□□□□ -1.61
TRF5	YNL299W	SSN3	P39073	555 aa		4.99	□□□□□ -1.61
TRF5	YNL299W	DLD3	P39976	496 aa	Known RBP	4.99	□□□□□ -1.61
TRF5	YNL299W	PSY2	P40164	858 aa		4.99	□□□□□ -1.61
TRF5	YNL299W	YCS4	Q06156	1176 aa		4.99	□□□□□ -1.61
TRF5	YNL299W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
TRF5	YNL299W	PRP40	P33203	583 aa	Known RBP	4.99	□□□□□ -1.61
TRF5	YNL299W	SHM1	P37292	490 aa	Predicted RBP	4.99	□□□□□ -1.61
TRF5	YNL299W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
TRF5	YNL299W	FAA4	P47912	694 aa	Known RBP	4.99	□□□□□ -1.61
TRF5	YNL299W	RSC1	P53236	928 aa		4.99	□□□□□ -1.61
TRF5	YNL299W	CWC24	P53769	259 aa		4.99	□□□□□ -1.61
TRF5	YNL299W	CTF4	Q01454	927 aa		4.99	□□□□□ -1.61
TRF5	YNL299W	CDC34	P14682	295 aa		4.98	□□□□□ -1.61
TRF5	YNL299W	GRX1	P25373	110 aa	Known RBP	4.98	□□□□□ -1.61
TRF5	YNL299W	UGA3	P26370	528 aa		4.98	□□□□□ -1.61
TRF5	YNL299W	HSP104	P31539	908 aa	Known RBP	4.98	□□□□□ -1.61
TRF5	YNL299W	UGA4	P32837	571 aa		4.98	□□□□□ -1.61
TRF5	YNL299W	YKL133C	P36066	463 aa		4.98	□□□□□ -1.61
TRF5	YNL299W	RRP14	P36080	434 aa	Known RBP	4.98	□□□□□ -1.61
TRF5	YNL299W	MRPS18	P42847	217 aa		4.98	□□□□□ -1.61
TRF5	YNL299W	HST3	P53687	447 aa		4.98	□□□□□ -1.61
TRF5	YNL299W	YPL109C	Q02981	657 aa		4.98	□□□□□ -1.61
TRF5	YNL299W	LCD1	Q04377	747 aa		4.98	□□□□□ -1.61
TRF5	YNL299W	CDC53	Q12018	815 aa	Known RBP	4.98	□□□□□ -1.61
TRF5	YNL299W	MCD1	Q12158	566 aa		4.98	□□□□□ -1.61
TRF5	YNL299W	NUP145	P49687	1317 aa		4.98	□□□□□ -1.61
TRF5	YNL299W	COB	P00163	385 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	DLD1	P32891	587 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	FIR1	P40020	876 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	RRT14	P40470	206 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	DOT5	P40553	215 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	OSW7	P43611	510 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	ADE16	P54113	591 aa	Known RBP	4.97	□□□□□ -1.61
TRF5	YNL299W	MEC3	Q02574	474 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	NKP2	Q06162	153 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	MCM5	P29496	775 aa	Known RBP	4.97	□□□□□ -1.61
TRF5	YNL299W	KAP122	P32767	1081 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	DUR3	P33413	735 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	ASH1	P34233	588 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	BSD2	P38356	321 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	YHL008C	P38750	627 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	PIC2	P40035	300 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	YGR053C	P53234	283 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	MDG1	P53885	366 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	GDE1	Q02979	1223 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	COG8	Q04632	607 aa		4.97	□□□□□ -1.61
TRF5	YNL299W	QCR6	P00127	147 aa		4.96	□□□□□ -1.62
TRF5	YNL299W	RKM3	P38222	552 aa		4.96	□□□□□ -1.62
TRF5	YNL299W	ALA1	P40825	983 aa	Known RBP	4.96	□□□□□ -1.62
TRF5	YNL299W	JJJ2	P46997	583 aa		4.96	□□□□□ -1.62
TRF5	YNL299W	NPA3	P47122	385 aa		4.96	□□□□□ -1.62
TRF5	YNL299W	YGL081W	P53156	320 aa		4.96	□□□□□ -1.62
TRF5	YNL299W	YNL050C	P53952	270 aa		4.96	□□□□□ -1.62
TRF5	YNL299W	GCR2	Q01722	534 aa		4.96	□□□□□ -1.62
TRF5	YNL299W	YMR074C	Q04773	145 aa		4.96	□□□□□ -1.62
TRF5	YNL299W	AOS1	Q06624	347 aa		4.96	□□□□□ -1.62
TRF5	YNL299W	PPM2	Q08282	695 aa		4.96	□□□□□ -1.62
TRF5	YNL299W	RIM15	P43565	1770 aa		4.96	□□□□□ -1.62
TRF5	YNL299W	CIR1	P42940	261 aa		4.95	□□□□□ -1.62
TRF5	YNL299W	HUL5	P53119	910 aa		4.95	□□□□□ -1.62
TRF5	YNL299W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	RIP-Chip
TRF5	YNL299W	ULP1	Q02724	621 aa		4.95	□□□□□ -1.62
TRF5	YNL299W	ECM16	Q04217	1267 aa	Known RBP	4.95	□□□□□ -1.62
TRF5	YNL299W	ISW1	P38144	1129 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms