RNA–Protein interactions for RNA: YNL294C

RIM21, Transcript of pH sensor molecule, component of the RIM101 pathway, yeast

Gene RIM21, Length 1,602 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM21	YNL294C	SYT1	Q06836	1226 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	SWR1	Q05471	1514 aa		4.93	□□□□□ -1.62
RIM21	YNL294C	CDC37	P06101	506 aa	Known RBP	4.93	□□□□□ -1.62
RIM21	YNL294C	SEC23	P15303	768 aa	Known RBP	4.93	□□□□□ -1.62
RIM21	YNL294C	YME2	P32843	850 aa		4.93	□□□□□ -1.62
RIM21	YNL294C	ERP5	P38819	212 aa		4.93	□□□□□ -1.62
RIM21	YNL294C	NMD3	P38861	518 aa	Known RBP	4.93	□□□□□ -1.62
RIM21	YNL294C	FIG4	P42837	879 aa		4.93	□□□□□ -1.62
RIM21	YNL294C	PDS5	Q04264	1277 aa		4.93	□□□□□ -1.62
RIM21	YNL294C	NOC3	Q07896	663 aa	Predicted RBP	4.93	□□□□□ -1.62
RIM21	YNL294C	HSP42	Q12329	375 aa		4.93	□□□□□ -1.62
RIM21	YNL294C	SSK2	P53599	1579 aa		4.92	□□□□□ -1.62
RIM21	YNL294C	STU1	P38198	1513 aa		4.92	□□□□□ -1.62
RIM21	YNL294C	DIT1	P21623	536 aa		4.92	□□□□□ -1.62
RIM21	YNL294C	CDC48	P25694	835 aa	Known RBP	4.92	□□□□□ -1.62
RIM21	YNL294C	PAM1	P37304	830 aa	Known RBP	4.92	□□□□□ -1.62
RIM21	YNL294C	ERB1	Q04660	807 aa	Known RBP	4.92	□□□□□ -1.62
RIM21	YNL294C	CIR2	Q08822	631 aa		4.92	□□□□□ -1.62
RIM21	YNL294C	YPL225W	Q08971	146 aa	Known RBP	4.92	□□□□□ -1.62
RIM21	YNL294C	SGT2	Q12118	346 aa	Known RBP	4.92	□□□□□ -1.62
RIM21	YNL294C	NUP157	P40064	1391 aa	Known RBP	4.92	□□□□□ -1.62
RIM21	YNL294C	ARD1	P07347	238 aa	Predicted RBP	4.91	□□□□□ -1.62
RIM21	YNL294C	CYC8	P14922	966 aa		4.91	□□□□□ -1.62
RIM21	YNL294C	TEC1	P18412	486 aa		4.91	□□□□□ -1.62
RIM21	YNL294C	MRC1	P25588	1096 aa		4.91	□□□□□ -1.62
RIM21	YNL294C	COY1	P34237	679 aa		4.91	□□□□□ -1.62
RIM21	YNL294C	MCX1	P38323	520 aa	Predicted RBP	4.91	□□□□□ -1.62
RIM21	YNL294C	STM1	P39015	273 aa	Known RBP	4.91	□□□□□ -1.62
RIM21	YNL294C	MET10	P39692	1035 aa		4.91	□□□□□ -1.62
RIM21	YNL294C	SET2	P46995	733 aa	Known RBP	4.91	□□□□□ -1.62
RIM21	YNL294C	YJR008W	P47085	338 aa		4.91	□□□□□ -1.62
RIM21	YNL294C	KEL2	P50090	882 aa		4.91	□□□□□ -1.62
RIM21	YNL294C	YNR014W	P53719	212 aa		4.91	□□□□□ -1.62
RIM21	YNL294C	GIR2	Q03768	265 aa	Predicted RBP	4.91	□□□□□ -1.62
RIM21	YNL294C	KRE28	Q04431	385 aa		4.91	□□□□□ -1.62
RIM21	YNL294C	KAR5	Q04746	504 aa		4.91	□□□□□ -1.62
RIM21	YNL294C	PCL8	Q08966	492 aa		4.91	□□□□□ -1.62
RIM21	YNL294C	RPP2B	P02400	110 aa	Known RBP	4.9	□□□□□ -1.62
RIM21	YNL294C	HMG1	P12683	1054 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	CDC10	P25342	322 aa	Known RBP	4.9	□□□□□ -1.62
RIM21	YNL294C	HSP104	P31539	908 aa	Known RBP	4.9	□□□□□ -1.62
RIM21	YNL294C	GUT2	P32191	649 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	RME1	P32338	300 aa	Known RBP	4.9	□□□□□ -1.62
RIM21	YNL294C	STE5	P32917	917 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	SDS3	P40505	327 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	MSN5	P52918	1224 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	PRP43	P53131	767 aa	Known RBP	4.9	□□□□□ -1.62
RIM21	YNL294C	YGL081W	P53156	320 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	DSL1	P53847	754 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	KRE33	P53914	1056 aa	Known RBP	4.9	□□□□□ -1.62
RIM21	YNL294C	YMR111C	Q04461	462 aa	Predicted RBP	4.9	□□□□□ -1.62
RIM21	YNL294C	YDL144C	Q07589	356 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	TLG2	Q08144	397 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	APC5	Q08683	685 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	HMI1	Q12039	706 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	WHI5	Q12416	295 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	YKL068W-A	Q3E826	78 aa		4.9	□□□□□ -1.62
RIM21	YNL294C	MET5	P47169	1442 aa		4.9	□□□□□ -1.63
RIM21	YNL294C	PET123	P17558	318 aa		4.9	□□□□□ -1.63
RIM21	YNL294C	KAR9	P32526	644 aa		4.9	□□□□□ -1.63
RIM21	YNL294C	ARC19	P33204	171 aa	Known RBP	4.9	□□□□□ -1.63
RIM21	YNL294C	PEX5	P35056	612 aa		4.9	□□□□□ -1.63
RIM21	YNL294C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
RIM21	YNL294C	UBP13	P38187	747 aa		4.9	□□□□□ -1.63
RIM21	YNL294C	SOH1	P38633	127 aa		4.9	□□□□□ -1.63
RIM21	YNL294C	SSZ1	P38788	538 aa	Known RBP	4.9	□□□□□ -1.63
RIM21	YNL294C	DLD3	P39976	496 aa	Known RBP	4.9	□□□□□ -1.63
RIM21	YNL294C	UBP15	P50101	1230 aa		4.9	□□□□□ -1.63
RIM21	YNL294C	CWC15	Q03772	175 aa	Known RBP	4.9	□□□□□ -1.63
RIM21	YNL294C	AOS1	Q06624	347 aa		4.9	□□□□□ -1.63
RIM21	YNL294C	TSR1	Q07381	788 aa	Known RBP	4.9	□□□□□ -1.63
RIM21	YNL294C	FRA1	Q07825	749 aa		4.9	□□□□□ -1.63
RIM21	YNL294C	YDR461C-A	Q2V2P7	80 aa		4.9	□□□□□ -1.63
RIM21	YNL294C	SWI1	P09547	1314 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	NUP159	P40477	1460 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	PET494	P07390	489 aa	Predicted RBP	4.89	□□□□□ -1.63
RIM21	YNL294C	GAL11	P19659	1081 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	MET4	P32389	672 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	UBP12	P39538	1254 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	SPC72	P39723	622 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	MET18	P40469	1032 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	ASI1	P54074	624 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	FMP30	Q02883	468 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	HOT1	Q03213	719 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	RSM28	Q03430	361 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	YPR084W	Q06821	456 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	AVO1	Q08236	1176 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	DNL4	Q08387	944 aa	Predicted RBP	4.89	□□□□□ -1.63
RIM21	YNL294C	MSC6	Q08818	692 aa	Known RBP	4.89	□□□□□ -1.63
RIM21	YNL294C	CHS5	Q12114	671 aa	Known RBP	4.89	□□□□□ -1.63
RIM21	YNL294C	CEX1	Q12453	761 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	ESP1	Q03018	1630 aa		4.89	□□□□□ -1.63
RIM21	YNL294C	ROM2	P51862	1356 aa	Known RBP	4.88	□□□□□ -1.63
RIM21	YNL294C	PDR5	P33302	1511 aa	Known RBP	4.88	□□□□□ -1.63
RIM21	YNL294C	SEC15	P22224	910 aa		4.88	□□□□□ -1.63
RIM21	YNL294C	CSE1	P33307	960 aa		4.88	□□□□□ -1.63
RIM21	YNL294C	TBS1	P38114	1094 aa		4.88	□□□□□ -1.63
RIM21	YNL294C	ATG3	P40344	310 aa		4.88	□□□□□ -1.63
RIM21	YNL294C	ACS2	P52910	683 aa	Known RBP	4.88	□□□□□ -1.63
RIM21	YNL294C	ORM1	P53224	222 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 49 ms