RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	MPH3	P0CE00	602 aa		7.73	□□□□□ -1.17
MSB3	YNL293W	ITR2	P30606	609 aa		7.73	□□□□□ -1.17
MSB3	YNL293W	PEP12	P32854	288 aa		7.73	□□□□□ -1.17
MSB3	YNL293W	BMH2	P34730	273 aa	Known RBP	7.73	□□□□□ -1.17
MSB3	YNL293W	FMS1	P50264	508 aa		7.73	□□□□□ -1.17
MSB3	YNL293W	SNZ1	Q03148	297 aa		7.73	□□□□□ -1.17
MSB3	YNL293W	DML1	Q03652	475 aa		7.73	□□□□□ -1.17
MSB3	YNL293W	RRN11	Q04712	507 aa		7.73	□□□□□ -1.17
MSB3	YNL293W	SPP382	Q06411	708 aa	Predicted RBP	7.73	□□□□□ -1.17
MSB3	YNL293W	BDF2	Q07442	638 aa		7.73	□□□□□ -1.17
MSB3	YNL293W	YOR223W	Q12015	292 aa		7.73	□□□□□ -1.17
MSB3	YNL293W	YIL002W-A	Q3E7Z5	69 aa		7.73	□□□□□ -1.17
MSB3	YNL293W	LEU1	P07264	779 aa	Known RBP	7.72	□□□□□ -1.17
MSB3	YNL293W	TRL1	P09880	827 aa	Known RBP	7.72	□□□□□ -1.17
MSB3	YNL293W	RSR1	P13856	272 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	RPA135	P22138	1203 aa	Known RBP	7.72	□□□□□ -1.17
MSB3	YNL293W	SEC21	P32074	935 aa	Known RBP	7.72	□□□□□ -1.17
MSB3	YNL293W	PPH3	P32345	308 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	MRE11	P32829	692 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	ATG19	P35193	415 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	CDC27	P38042	758 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	YHR020W	P38708	688 aa	Known RBP	7.72	□□□□□ -1.17
MSB3	YNL293W	PES4	P39684	611 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	VHR2	P40041	505 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	RPA14	P50106	137 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	DIP5	P53388	608 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	YPR089W	O13585	888 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	REP1	P03871	373 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	ATE1	P16639	503 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	IME1	P21190	360 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	ARG1	P22768	420 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	PLC1	P32383	869 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	SEC8	P32855	1065 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	REI1	P38344	393 aa	Predicted RBP	7.72	□□□□□ -1.17
MSB3	YNL293W	CCT4	P39078	528 aa	Known RBP	7.72	□□□□□ -1.17
MSB3	YNL293W	TMN3	P40071	706 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	SNX4	P47057	423 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	RAD17	P48581	401 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	MCP2	Q06567	569 aa		7.72	□□□□□ -1.17
MSB3	YNL293W	RPB4	P20433	221 aa	Predicted RBP	7.71	□□□□□ -1.18
MSB3	YNL293W	HCA4	P20448	770 aa	Known RBP	7.71	□□□□□ -1.18
MSB3	YNL293W	BMH1	P29311	267 aa	Known RBP	7.71	□□□□□ -1.18
MSB3	YNL293W	SMY1	P32364	656 aa	Known RBP	7.71	□□□□□ -1.18
MSB3	YNL293W	ECM32	P32644	1121 aa	Known RBP	7.71	□□□□□ -1.18
MSB3	YNL293W	TRZ1	P36159	838 aa	Predicted RBP	7.71	□□□□□ -1.18
MSB3	YNL293W	RLP7	P40693	322 aa	Known RBP	7.71	□□□□□ -1.18
MSB3	YNL293W	SRB7	P47822	140 aa		7.71	□□□□□ -1.18
MSB3	YNL293W	IMD4	P50094	524 aa	Known RBP	7.71	□□□□□ -1.18
MSB3	YNL293W	ARI1	P53111	347 aa	Known RBP	7.71	□□□□□ -1.18
MSB3	YNL293W	RCM1	P53972	490 aa		7.71	□□□□□ -1.18
MSB3	YNL293W	IES3	Q12345	250 aa		7.71	□□□□□ -1.18
MSB3	YNL293W	YML002W	P0CF17	737 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	YKL222C	P35995	705 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	FZO1	P38297	855 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	VPS8	P39702	1274 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	GVP36	P40531	326 aa	Known RBP	7.7	□□□□□ -1.18
MSB3	YNL293W	UTP22	P53254	1237 aa	Predicted RBP	7.7	□□□□□ -1.18
MSB3	YNL293W	TAP42	Q04372	366 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	YOR352W	Q08816	343 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	OSH2	Q12451	1283 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	VPS15	P22219	1454 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	RPO26	P20435	155 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	OCA4	P25366	362 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	SLA2	P33338	968 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	ESL2	P36168	1195 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	SET1	P38827	1080 aa	Known RBP	7.7	□□□□□ -1.18
MSB3	YNL293W	TDA11	P38854	504 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	CAJ1	P39101	391 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	NOC2	P39744	710 aa	Known RBP	7.7	□□□□□ -1.18
MSB3	YNL293W	MEP1	P40260	492 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	MET12	P46151	657 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	MON1	P53129	644 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	AAD16	Q02895	342 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	TFB2	Q02939	513 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	SYF1	Q04048	859 aa	Predicted RBP	7.7	□□□□□ -1.18
MSB3	YNL293W	CSR1	Q06705	408 aa	Known RBP	7.7	□□□□□ -1.18
MSB3	YNL293W	RTT10	Q08924	1013 aa		7.7	□□□□□ -1.18
MSB3	YNL293W	ESC1	Q03661	1658 aa	Known RBP	7.69	□□□□□ -1.18
MSB3	YNL293W	YMR085W	P0CF18	432 aa		7.69	□□□□□ -1.18
MSB3	YNL293W	VMA1	P17255	1071 aa	Known RBP	7.69	□□□□□ -1.18
MSB3	YNL293W	MGM1	P32266	881 aa		7.69	□□□□□ -1.18
MSB3	YNL293W	SLA1	P32790	1244 aa		7.69	□□□□□ -1.18
MSB3	YNL293W	STE13	P33894	931 aa		7.69	□□□□□ -1.18
MSB3	YNL293W	KES1	P35844	434 aa	Known RBP	7.69	□□□□□ -1.18
MSB3	YNL293W	APL2	P36000	726 aa	Predicted RBP	7.69	□□□□□ -1.18
MSB3	YNL293W	YRO2	P38079	344 aa		7.69	□□□□□ -1.18
MSB3	YNL293W	IFA38	P38286	347 aa		7.69	□□□□□ -1.18
MSB3	YNL293W	ESL1	P40456	1118 aa		7.69	□□□□□ -1.18
MSB3	YNL293W	INA22	P40576	216 aa		7.69	□□□□□ -1.18
MSB3	YNL293W	PXA1	P41909	870 aa		7.69	□□□□□ -1.18
MSB3	YNL293W	FYV8	P46949	817 aa	Known RBP	7.69	□□□□□ -1.18
MSB3	YNL293W	YJR079W	P47126	109 aa		7.69	□□□□□ -1.18
MSB3	YNL293W	HOP2	P53187	214 aa		7.69	□□□□□ -1.18
MSB3	YNL293W	MCM16	Q12262	181 aa		7.69	□□□□□ -1.18
MSB3	YNL293W	TY3B-I	Q7LHG5	1498 aa	Known RBP	7.69	□□□□□ -1.18
MSB3	YNL293W	LYS2	P07702	1392 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	MRPL25	P23369	157 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	VPH2	P32341	215 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	SSO1	P32867	290 aa		7.68	□□□□□ -1.18
MSB3	YNL293W	DBP7	P36120	742 aa	Known RBP	7.68	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms