RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC7	YNL054W	ORM2	Q06144	216 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	RPO41	P13433	1351 aa	Known RBP	4.6	□□□□□ -1.67
VAC7	YNL054W	TOA1	P32773	286 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	RIB7	P33312	244 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	OAF3	P36023	863 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	YHL017W	P38745	532 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	SPO22	P40511	975 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	TLG1	Q03322	224 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	YMR111C	Q04461	462 aa	Predicted RBP	4.6	□□□□□ -1.67
VAC7	YNL054W	GNT1	Q12096	491 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	AUS1	Q08409	1394 aa		4.6	□□□□□ -1.67
VAC7	YNL054W	SEC20	P28791	383 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	SPC42	P36094	363 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	BOI1	P38041	980 aa	Known RBP	4.59	□□□□□ -1.67
VAC7	YNL054W	SPP381	P38282	291 aa	Predicted RBP	4.59	□□□□□ -1.67
VAC7	YNL054W	PIB2	P53191	635 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	UBX4	P54730	416 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	YOR296W	Q08748	1289 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	TOM70	P07213	617 aa	Known RBP	4.59	□□□□□ -1.67
VAC7	YNL054W	GFA1	P14742	717 aa	Known RBP	4.59	□□□□□ -1.67
VAC7	YNL054W	POL3	P15436	1097 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	SPO12	P17123	173 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	TYR1	P20049	452 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	EFT1	P32324	842 aa	Known RBP	4.59	□□□□□ -1.67
VAC7	YNL054W	PYC2	P32327	1180 aa	Known RBP	4.59	□□□□□ -1.67
VAC7	YNL054W	RPC25	P35718	212 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	MCX1	P38323	520 aa	Predicted RBP	4.59	□□□□□ -1.67
VAC7	YNL054W	MLC1	P53141	149 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	FAP1	P53971	965 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	ZDS2	P54786	942 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	URH1	Q04179	340 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	NSE3	Q05541	303 aa		4.59	□□□□□ -1.67
VAC7	YNL054W	IMH1	Q06704	911 aa	Known RBP	4.59	□□□□□ -1.67
VAC7	YNL054W	TUP1	P16649	713 aa		4.59	□□□□□ -1.68
VAC7	YNL054W	KTR1	P27810	393 aa	Known RBP	4.59	□□□□□ -1.68
VAC7	YNL054W	ERC1	P38767	581 aa		4.59	□□□□□ -1.68
VAC7	YNL054W	SHQ1	P40486	507 aa	Predicted RBP	4.59	□□□□□ -1.68
VAC7	YNL054W	YAP5	P40574	245 aa		4.59	□□□□□ -1.68
VAC7	YNL054W	CUS1	Q02554	436 aa	Predicted RBP	4.59	□□□□□ -1.68
VAC7	YNL054W	PKH1	Q03407	766 aa		4.59	□□□□□ -1.68
VAC7	YNL054W	NUR1	Q12066	484 aa		4.59	□□□□□ -1.68
VAC7	YNL054W	OCA6	Q12454	224 aa		4.59	□□□□□ -1.68
VAC7	YNL054W	NBL1	Q3E7Y6	73 aa		4.59	□□□□□ -1.68
VAC7	YNL054W	KEX2	P13134	814 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	PDC6	P26263	563 aa	Known RBP	4.58	□□□□□ -1.68
VAC7	YNL054W	NTH2	P35172	780 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	LAS1	P36146	502 aa	Predicted RBP	4.58	□□□□□ -1.68
VAC7	YNL054W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	RIP-Chip
VAC7	YNL054W	YBR062C	P38239	180 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	BOI2	P39969	1040 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	VID27	P40157	782 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	PDS1	P40316	373 aa	Predicted RBP	4.58	□□□□□ -1.68
VAC7	YNL054W	ALF1	P53904	254 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	BOP3	P53958	396 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	NOG1	Q02892	647 aa	Known RBP	4.58	□□□□□ -1.68
VAC7	YNL054W	YPL216W	Q08964	1102 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	PHO13	P19881	312 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	APL1	P27351	700 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	RPC37	P36121	282 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	TIF4632	P39936	914 aa	Known RBP	4.58	□□□□□ -1.68
VAC7	YNL054W	GCN20	P43535	752 aa	Known RBP	4.58	□□□□□ -1.68
VAC7	YNL054W	RBL2	P48606	106 aa	Known RBP	4.58	□□□□□ -1.68
VAC7	YNL054W	RPA14	P50106	137 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	YPL150W	Q12152	901 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	VPS5	Q92331	675 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	TY1B-DR3	Q99231	1755 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
VAC7	YNL054W	IME1	P21190	360 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	JNM1	P36224	373 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	FES1	P38260	290 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	CTM1	P38818	585 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	YGR016W	P53209	190 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	LGE1	Q02796	332 aa	Known RBP	4.58	□□□□□ -1.68
VAC7	YNL054W	MMT1	Q03218	510 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	FIN1	Q03898	291 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	CIR2	Q08822	631 aa		4.58	□□□□□ -1.68
VAC7	YNL054W	ENO2	P00925	437 aa	Known RBP	4.57	□□□□□ -1.68
VAC7	YNL054W	GYP6	P32806	458 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	MCD4	P36051	919 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	EFM2	P38347	419 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	YFR006W	P43590	535 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	MTR4	P47047	1073 aa	Known RBP	4.57	□□□□□ -1.68
VAC7	YNL054W	ALO1	P54783	526 aa	Known RBP	4.57	□□□□□ -1.68
VAC7	YNL054W	SAC3	P46674	1301 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	SEC2	P17065	759 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	MVD1	P32377	396 aa	Known RBP	4.57	□□□□□ -1.68
VAC7	YNL054W	GCD7	P32502	381 aa	Predicted RBP	4.57	□□□□□ -1.68
VAC7	YNL054W	MRE11	P32829	692 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	BUD16	P39988	312 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	ERG5	P54781	538 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	YLR177W	Q06251	628 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	SPO75	Q07798	868 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	NOP12	Q08208	459 aa	Known RBP	4.57	□□□□□ -1.68
VAC7	YNL054W	YLR125W	Q12138	136 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	RIB2	Q12362	591 aa	Known RBP	4.57	□□□□□ -1.68
VAC7	YNL054W	BRR1	Q99177	341 aa	Predicted RBP	4.57	□□□□□ -1.68
VAC7	YNL054W	YRF1-4	O13559	1382 aa		4.57	□□□□□ -1.68
VAC7	YNL054W	MSS116	P15424	664 aa	Known RBP	4.56	□□□□□ -1.68
VAC7	YNL054W	DIT2	P21595	489 aa		4.56	□□□□□ -1.68
VAC7	YNL054W	FBP26	P32604	452 aa		4.56	□□□□□ -1.68

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