RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeastyeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCM1YNL022C POB3Q04636 552 aaKnown RBP5.64□□□□□ -1.51
RCM1YNL022C YOR093CQ12275 1648 aa5.64□□□□□ -1.51
RCM1YNL022C TRM3Q07527 1436 aa5.64□□□□□ -1.51
RCM1YNL022C FAA3P39002 694 aa5.64□□□□□ -1.51
RCM1YNL022C ACO2P39533 789 aa5.64□□□□□ -1.51
RCM1YNL022C MRPS18P42847 217 aa5.64□□□□□ -1.51
RCM1YNL022C SAP155P43612 1002 aa5.64□□□□□ -1.51
RCM1YNL022C COBP00163 385 aa5.63□□□□□ -1.51
RCM1YNL022C PRE9P23638 258 aaKnown RBP5.63□□□□□ -1.51
RCM1YNL022C MSC7P38694 644 aa5.63□□□□□ -1.51
RCM1YNL022C TOM20P35180 183 aa5.62□□□□□ -1.51
RCM1YNL022C NUG1P40010 520 aaKnown RBP5.62□□□□□ -1.51
RCM1YNL022C ADE12P80210 433 aaKnown RBP5.62□□□□□ -1.51
RCM1YNL022C RPN4Q03465 531 aa5.62□□□□□ -1.51
RCM1YNL022C ADI1Q03677 179 aa5.62□□□□□ -1.51
RCM1YNL022C SYT1Q06836 1226 aa5.62□□□□□ -1.51
RCM1YNL022C VMR1P38735 1592 aa5.61□□□□□ -1.51
RCM1YNL022C CCP1P00431 361 aa5.61□□□□□ -1.51
RCM1YNL022C SHU2P38957 223 aa5.61□□□□□ -1.51
RCM1YNL022C INP51P40559 946 aaKnown RBP5.61□□□□□ -1.51
RCM1YNL022C YIR007WP40566 764 aa5.61□□□□□ -1.51
RCM1YNL022C ULP1Q02724 621 aa5.61□□□□□ -1.51
RCM1YNL022C YPL109CQ02981 657 aa5.61□□□□□ -1.51
RCM1YNL022C MCM5P29496 775 aaKnown RBP5.6□□□□□ -1.51
RCM1YNL022C SQT1P35184 431 aa5.6□□□□□ -1.51
RCM1YNL022C PBP2P38151 413 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
RCM1YNL022C MON1P53129 644 aa5.6□□□□□ -1.51
RCM1YNL022C CAF120P53836 1060 aa5.6□□□□□ -1.51
RCM1YNL022C TY1A-DR2Q03964 440 aaKnown RBP5.6□□□□□ -1.51
RCM1YNL022C TOS4Q06266 489 aa5.6□□□□□ -1.51
RCM1YNL022C PDR5P33302 1511 aaKnown RBP5.6□□□□□ -1.51
RCM1YNL022C NUP188P52593 1655 aaKnown RBP5.6□□□□□ -1.51
RCM1YNL022C MET6P05694 767 aaKnown RBP5.59□□□□□ -1.51
RCM1YNL022C TAF13P11747 167 aa5.59□□□□□ -1.51
RCM1YNL022C NPR1P22211 790 aa5.59□□□□□ -1.51
RCM1YNL022C RIM11P38615 370 aa5.59□□□□□ -1.51
RCM1YNL022C LEM3P42838 414 aa5.59□□□□□ -1.51
RCM1YNL022C YJL181WP46987 611 aa5.59□□□□□ -1.51
RCM1YNL022C RSM26P47141 266 aa5.59□□□□□ -1.51
RCM1YNL022C CMR1Q12510 522 aaKnown RBP5.59□□□□□ -1.51
RCM1YNL022C YGR161W-CQ3E744 92 aa5.59□□□□□ -1.51
RCM1YNL022C PRP5P21372 849 aaPredicted RBP5.58□□□□□ -1.52
RCM1YNL022C PRK1P40494 810 aa5.58□□□□□ -1.52
RCM1YNL022C FET4P40988 552 aa5.58□□□□□ -1.52
RCM1YNL022C BIO5P53744 561 aaKnown RBP5.58□□□□□ -1.52
RCM1YNL022C GDE1Q02979 1223 aa5.58□□□□□ -1.52
RCM1YNL022C BDF2Q07442 638 aa5.58□□□□□ -1.52
RCM1YNL022C SOG2Q08817 791 aa5.58□□□□□ -1.52
RCM1YNL022C GLO4Q12320 285 aa5.58□□□□□ -1.52
RCM1YNL022C GUP1P53154 560 aa5.58□□□□□ -1.52
RCM1YNL022C SUB1P54000 292 aaKnown RBP5.58□□□□□ -1.52
RCM1YNL022C UBX5Q06682 500 aa5.58□□□□□ -1.52
RCM1YNL022C SLP1Q12232 587 aa5.58□□□□□ -1.52
RCM1YNL022C PDR11P40550 1411 aa5.57□□□□□ -1.52
RCM1YNL022C DNF2Q12675 1612 aa5.57□□□□□ -1.52
RCM1YNL022C HVG1P0CE11 249 aa5.57□□□□□ -1.52
RCM1YNL022C GRX1P25373 110 aaKnown RBP5.57□□□□□ -1.52
RCM1YNL022C KNS1P32350 737 aaPredicted RBP5.57□□□□□ -1.52
RCM1YNL022C NOG1Q02892 647 aaKnown RBP5.57□□□□□ -1.52
RCM1YNL022C SSB1P11484 613 aaKnown RBP5.56□□□□□ -1.52
RCM1YNL022C UGA4P32837 571 aa5.56□□□□□ -1.52
RCM1YNL022C DUR3P33413 735 aa5.56□□□□□ -1.52
RCM1YNL022C AMN1P38285 549 aaPredicted RBP5.56□□□□□ -1.52
RCM1YNL022C MNN1P39106 762 aa5.56□□□□□ -1.52
RCM1YNL022C SSB2P40150 613 aaKnown RBP5.56□□□□□ -1.52
RCM1YNL022C ATG36P46983 293 aa5.56□□□□□ -1.52
RCM1YNL022C TIM54P47045 478 aa5.56□□□□□ -1.52
RCM1YNL022C UTP14Q04500 899 aaKnown RBP5.56□□□□□ -1.52
RCM1YNL022C TDA5Q06417 326 aaKnown RBP5.56□□□□□ -1.52
RCM1YNL022C IML1P47170 1584 aa5.56□□□□□ -1.52
RCM1YNL022C PRI2P20457 528 aa5.55□□□□□ -1.52
RCM1YNL022C TFA2P36145 328 aa5.55□□□□□ -1.52
RCM1YNL022C BUD6P41697 788 aa5.55□□□□□ -1.52
RCM1YNL022C JJJ3P47138 172 aa5.55□□□□□ -1.52
RCM1YNL022C YJR124CP47159 448 aa5.55□□□□□ -1.52
RCM1YNL022C HUL5P53119 910 aa5.55□□□□□ -1.52
RCM1YNL022C NAN1Q02931 896 aaKnown RBP5.55□□□□□ -1.52
RCM1YNL022C DPH6Q12429 685 aa5.55□□□□□ -1.52
RCM1YNL022C GPM1P00950 247 aaKnown RBP5.54□□□□□ -1.52
RCM1YNL022C CDC34P14682 295 aa5.54□□□□□ -1.52
RCM1YNL022C RAD4P14736 754 aa5.54□□□□□ -1.52
RCM1YNL022C SEC23P15303 768 aaKnown RBP5.54□□□□□ -1.52
RCM1YNL022C PDC5P16467 563 aaKnown RBP5.54□□□□□ -1.52
RCM1YNL022C GBP2P25555 427 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
RCM1YNL022C GAR1P28007 205 aaKnown RBP5.54□□□□□ -1.52
RCM1YNL022C NUP82P40368 713 aa5.54□□□□□ -1.52
RCM1YNL022C ENT3P47160 408 aa5.54□□□□□ -1.52
RCM1YNL022C YGL081WP53156 320 aa5.54□□□□□ -1.52
RCM1YNL022C YNR065CP53751 1116 aa5.54□□□□□ -1.52
RCM1YNL022C RTT10Q08924 1013 aa5.54□□□□□ -1.52
RCM1YNL022C VMA4P22203 233 aaKnown RBP5.53□□□□□ -1.52
RCM1YNL022C PAF1P38351 445 aa5.53□□□□□ -1.52
RCM1YNL022C PIC2P40035 300 aa5.53□□□□□ -1.52
RCM1YNL022C MSH4P40965 878 aaPredicted RBP5.53□□□□□ -1.52
RCM1YNL022C LSB6P42951 607 aa5.53□□□□□ -1.52
RCM1YNL022C YIG1Q08956 461 aa5.53□□□□□ -1.52
RCM1YNL022C TMA46Q12000 345 aaKnown RBP5.53□□□□□ -1.52
RCM1YNL022C HTS1P07263 546 aaKnown RBP5.52□□□□□ -1.53
RCM1YNL022C MSH3P25336 1018 aa5.52□□□□□ -1.53
RCM1YNL022C YKL077WP36081 392 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms