RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W RPL40BP0CH09 128 aaKnown RBP2.87□□□□□ -1.95
UBP15YMR304W MSH3P25336 1018 aa2.87□□□□□ -1.95
UBP15YMR304W IXR1P33417 597 aa2.87□□□□□ -1.95
UBP15YMR304W FET4P40988 552 aa2.87□□□□□ -1.95
UBP15YMR304W VPS62P53285 467 aa2.87□□□□□ -1.95
UBP15YMR304W EAF1Q06337 982 aa2.87□□□□□ -1.95
UBP15YMR304W AIM7Q12156 149 aa2.87□□□□□ -1.95
UBP15YMR304W CLF1Q12309 687 aaPredicted RBP2.87□□□□□ -1.95
UBP15YMR304W APC2Q12440 853 aa2.87□□□□□ -1.95
UBP15YMR304W LSO1Q3E827 93 aa2.87□□□□□ -1.95
UBP15YMR304W CDC31P06704 161 aaKnown RBP2.86□□□□□ -1.95
UBP15YMR304W TIM23P32897 222 aa2.86□□□□□ -1.95
UBP15YMR304W RPS0AP32905 252 aaKnown RBP2.86□□□□□ -1.95
UBP15YMR304W MPE1P35728 441 aaKnown RBP2.86□□□□□ -1.95
UBP15YMR304W SDS3P40505 327 aa2.86□□□□□ -1.95
UBP15YMR304W SUP35P05453 685 aaKnown RBP2.86□□□□□ -1.95
UBP15YMR304W GRX3Q03835 250 aa2.86□□□□□ -1.95
UBP15YMR304W ENT2Q05785 613 aa2.86□□□□□ -1.95
UBP15YMR304W YPR097WQ06839 1073 aa2.86□□□□□ -1.95
UBP15YMR304W LSP1Q12230 341 aaKnown RBP2.86□□□□□ -1.95
UBP15YMR304W IDI1P15496 288 aa2.86□□□□□ -1.95
UBP15YMR304W UGA3P26370 528 aa2.86□□□□□ -1.95
UBP15YMR304W ULP1Q02724 621 aa2.86□□□□□ -1.95
UBP15YMR304W PNG1Q02890 363 aa2.86□□□□□ -1.95
UBP15YMR304W RPT2P40327 437 aaKnown RBP2.85□□□□□ -1.95
UBP15YMR304W RSM28Q03430 361 aa2.85□□□□□ -1.95
UBP15YMR304W LEU2P04173 364 aaPredicted RBP2.85□□□□□ -1.95
UBP15YMR304W SPT2P06843 333 aaPredicted RBP2.85□□□□□ -1.95
UBP15YMR304W TIF4631P39935 952 aaKnown RBP2.85□□□□□ -1.95
UBP15YMR304W PSF2P40359 213 aa2.85□□□□□ -1.95
UBP15YMR304W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
UBP15YMR304W SNA4Q07549 140 aa2.85□□□□□ -1.95
UBP15YMR304W GAL11P19659 1081 aa2.84□□□□□ -1.95
UBP15YMR304W AFT1P22149 690 aa2.84□□□□□ -1.95
UBP15YMR304W EFM2P38347 419 aa2.84□□□□□ -1.95
UBP15YMR304W ERG7P38604 731 aa2.84□□□□□ -1.95
UBP15YMR304W YLL054CQ12244 843 aa2.84□□□□□ -1.95
UBP15YMR304W SWI6P09959 803 aa2.84□□□□□ -1.95
UBP15YMR304W YSH1Q06224 779 aaPredicted RBP2.84□□□□□ -1.95
UBP15YMR304W KIN1P13185 1064 aa2.84□□□□□ -1.96
UBP15YMR304W KTR1P27810 393 aaKnown RBP2.84□□□□□ -1.96
UBP15YMR304W SWE1P32944 819 aa2.84□□□□□ -1.96
UBP15YMR304W NTH2P35172 780 aa2.84□□□□□ -1.96
UBP15YMR304W YOR289WQ12012 251 aaPredicted RBP2.84□□□□□ -1.96
UBP15YMR304W AHC1Q12433 566 aa2.84□□□□□ -1.96
UBP15YMR304W PMD1P32634 1753 aa2.84□□□□□ -1.96
UBP15YMR304W YDR131CQ03899 556 aa2.83□□□□□ -1.96
UBP15YMR304W BDF2Q07442 638 aa2.83□□□□□ -1.96
UBP15YMR304W MDM20Q12387 796 aaKnown RBP2.83□□□□□ -1.96
UBP15YMR304W LEU1P07264 779 aaKnown RBP2.83□□□□□ -1.96
UBP15YMR304W LPD1P09624 499 aaKnown RBP2.83□□□□□ -1.96
UBP15YMR304W MER1P16523 270 aa2.83□□□□□ -1.96
UBP15YMR304W POA1P38218 177 aa2.83□□□□□ -1.96
UBP15YMR304W LAM4P38800 1345 aa2.83□□□□□ -1.96
UBP15YMR304W SBE2P42223 864 aaKnown RBP2.83□□□□□ -1.96
UBP15YMR304W YJR115WP47152 169 aa2.83□□□□□ -1.96
UBP15YMR304W SYF1Q04048 859 aaPredicted RBP2.83□□□□□ -1.96
UBP15YMR304W YDR444WQ04093 687 aa2.83□□□□□ -1.96
UBP15YMR304W PSK2Q08217 1101 aa2.83□□□□□ -1.96
UBP15YMR304W TPD3P31383 635 aa2.83□□□□□ -1.96
UBP15YMR304W PIM1P36775 1133 aa2.83□□□□□ -1.96
UBP15YMR304W GAS5Q08193 484 aa2.83□□□□□ -1.96
UBP15YMR304W PUS1Q12211 544 aaKnown RBP2.83□□□□□ -1.96
UBP15YMR304W MET22P32179 357 aa2.82□□□□□ -1.96
UBP15YMR304W SMY1P32364 656 aaKnown RBP2.82□□□□□ -1.96
UBP15YMR304W GDA1P32621 518 aa2.82□□□□□ -1.96
UBP15YMR304W ERP2P39704 215 aa2.82□□□□□ -1.96
UBP15YMR304W YER158CP40095 573 aa2.82□□□□□ -1.96
UBP15YMR304W YJL007CP47080 104 aa2.82□□□□□ -1.96
UBP15YMR304W RPN7Q06103 429 aaKnown RBP2.82□□□□□ -1.96
UBP15YMR304W DAL5P15365 543 aa2.82□□□□□ -1.96
UBP15YMR304W SER1P33330 395 aaKnown RBP2.82□□□□□ -1.96
UBP15YMR304W YGL242CP53066 181 aa2.82□□□□□ -1.96
UBP15YMR304W HUL5P53119 910 aa2.82□□□□□ -1.96
UBP15YMR304W SGD1Q06132 899 aa2.82□□□□□ -1.96
UBP15YMR304W FPR4Q06205 392 aaPredicted RBP2.82□□□□□ -1.96
UBP15YMR304W RIX7Q07844 837 aaKnown RBP2.82□□□□□ -1.96
UBP15YMR304W OPI1P21957 404 aa2.82□□□□□ -1.96
UBP15YMR304W GRX4P32642 244 aa2.82□□□□□ -1.96
UBP15YMR304W GRS1P38088 690 aaKnown RBP2.82□□□□□ -1.96
UBP15YMR304W ALG14P38242 237 aa2.82□□□□□ -1.96
UBP15YMR304W YHL012WP38709 493 aa2.82□□□□□ -1.96
UBP15YMR304W TPO2P53283 614 aa2.82□□□□□ -1.96
UBP15YMR304W PHM6Q05637 104 aa2.82□□□□□ -1.96
UBP15YMR304W NOP7P53261 605 aaKnown RBP2.81□□□□□ -1.96
UBP15YMR304W SML1Q04964 104 aa2.81□□□□□ -1.96
UBP15YMR304W UBR2Q07963 1872 aa2.81□□□□□ -1.96
UBP15YMR304W TY4B-PA0A0B7P3V8 1104 aa2.81□□□□□ -1.96
UBP15YMR304W CYB2P00175 591 aa2.81□□□□□ -1.96
UBP15YMR304W XRS2P33301 854 aa2.81□□□□□ -1.96
UBP15YMR304W RRG1Q12167 365 aaPredicted RBP2.81□□□□□ -1.96
UBP15YMR304W PUF4P25339 888 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
UBP15YMR304W PHO87P25360 923 aa2.81□□□□□ -1.96
UBP15YMR304W TIF5P38431 405 aaKnown RBP2.81□□□□□ -1.96
UBP15YMR304W MAM1P40065 302 aa2.81□□□□□ -1.96
UBP15YMR304W FAR11P53917 953 aa2.81□□□□□ -1.96
UBP15YMR304W TAP42Q04372 366 aa2.81□□□□□ -1.96
UBP15YMR304W TMN3P40071 706 aa2.8□□□□□ -1.96
UBP15YMR304W LSC1P53598 329 aaKnown RBP2.8□□□□□ -1.96
UBP15YMR304W ADE12P80210 433 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms