RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC42	YLR229C	BSC2	Q05611	235 aa		5.23	□□□□□ -1.57
CDC42	YLR229C	LCB5	Q06147	687 aa	Known RBP	5.23	□□□□□ -1.57
CDC42	YLR229C	OXR1	Q08952	273 aa		5.23	□□□□□ -1.57
CDC42	YLR229C	ENT1	Q12518	454 aa		5.23	□□□□□ -1.57
CDC42	YLR229C	RSF2	P46974	1380 aa		5.23	□□□□□ -1.57
CDC42	YLR229C	URB1	P34241	1764 aa	Known RBP	5.22	□□□□□ -1.57
CDC42	YLR229C	FKS3	Q04952	1785 aa		5.22	□□□□□ -1.57
CDC42	YLR229C	COQ4	O13525	335 aa		5.22	□□□□□ -1.57
CDC42	YLR229C	CDC19	P00549	500 aa	Known RBP	5.22	□□□□□ -1.57
CDC42	YLR229C	IRS4	P36115	615 aa	Known RBP	5.22	□□□□□ -1.57
CDC42	YLR229C	MRPL16	P38064	232 aa		5.22	□□□□□ -1.57
CDC42	YLR229C	APM2	P38700	605 aa		5.22	□□□□□ -1.57
CDC42	YLR229C	NTA1	P40354	457 aa		5.22	□□□□□ -1.57
CDC42	YLR229C	NOC3	Q07896	663 aa	Predicted RBP	5.22	□□□□□ -1.57
CDC42	YLR229C	TY1A-BL	Q12266	440 aa		5.22	□□□□□ -1.57
CDC42	YLR229C	NUP145	P49687	1317 aa		5.22	□□□□□ -1.57
CDC42	YLR229C	MET22	P32179	357 aa		5.21	□□□□□ -1.58
CDC42	YLR229C	BSD2	P38356	321 aa		5.21	□□□□□ -1.58
CDC42	YLR229C	AIM46	P38885	310 aa		5.21	□□□□□ -1.58
CDC42	YLR229C	PSY2	P40164	858 aa		5.21	□□□□□ -1.58
CDC42	YLR229C	MEC3	Q02574	474 aa		5.21	□□□□□ -1.58
CDC42	YLR229C	YMR265C	Q03508	461 aa	Known RBP	5.21	□□□□□ -1.58
CDC42	YLR229C	CSI1	Q04368	295 aa		5.21	□□□□□ -1.58
CDC42	YLR229C	INP54	Q08227	384 aa	Known RBP	5.21	□□□□□ -1.58
CDC42	YLR229C	LSP1	Q12230	341 aa	Known RBP	5.21	□□□□□ -1.58
CDC42	YLR229C	LYS2	P07702	1392 aa		5.2	□□□□□ -1.58
CDC42	YLR229C	PCT1	P13259	424 aa		5.2	□□□□□ -1.58
CDC42	YLR229C	MET4	P32389	672 aa		5.2	□□□□□ -1.58
CDC42	YLR229C	YHL008C	P38750	627 aa		5.2	□□□□□ -1.58
CDC42	YLR229C	ALD2	P47771	506 aa		5.2	□□□□□ -1.58
CDC42	YLR229C	RSC2	Q06488	889 aa		5.2	□□□□□ -1.58
CDC42	YLR229C	YOL057W	Q08225	711 aa		5.2	□□□□□ -1.58
CDC42	YLR229C	RPS19A	P07280	144 aa	Known RBP	5.19	□□□□□ -1.58
CDC42	YLR229C	RPS19B	P07281	144 aa	Predicted RBP	5.19	□□□□□ -1.58
CDC42	YLR229C	RAD4	P14736	754 aa		5.19	□□□□□ -1.58
CDC42	YLR229C	FPS1	P23900	669 aa		5.19	□□□□□ -1.58
CDC42	YLR229C	GAR1	P28007	205 aa	Known RBP	5.19	□□□□□ -1.58
CDC42	YLR229C	RPT1	P33299	467 aa	Known RBP	5.19	□□□□□ -1.58
CDC42	YLR229C	YNG2	P38806	282 aa	Known RBP	5.19	□□□□□ -1.58
CDC42	YLR229C	SKP1	P52286	194 aa		5.19	□□□□□ -1.58
CDC42	YLR229C	ECM16	Q04217	1267 aa	Known RBP	5.19	□□□□□ -1.58
CDC42	YLR229C	COG8	Q04632	607 aa		5.19	□□□□□ -1.58
CDC42	YLR229C	TIF6	Q12522	245 aa	Known RBP	5.19	□□□□□ -1.58
CDC42	YLR229C	NOT3	P06102	836 aa	Known RBP	5.18	□□□□□ -1.58
CDC42	YLR229C	OSM1	P21375	501 aa	Known RBP	5.18	□□□□□ -1.58
CDC42	YLR229C	DIT1	P21623	536 aa		5.18	□□□□□ -1.58
CDC42	YLR229C	VPS35	P34110	944 aa		5.18	□□□□□ -1.58
CDC42	YLR229C	YKL133C	P36066	463 aa		5.18	□□□□□ -1.58
CDC42	YLR229C	RGD2	P43556	714 aa		5.18	□□□□□ -1.58
CDC42	YLR229C	ROG3	P43602	733 aa		5.18	□□□□□ -1.58
CDC42	YLR229C	ADE16	P54113	591 aa	Known RBP	5.18	□□□□□ -1.58
CDC42	YLR229C	RSC4	Q02206	625 aa		5.18	□□□□□ -1.58
CDC42	YLR229C	HEH2	Q03281	663 aa		5.18	□□□□□ -1.58
CDC42	YLR229C	MRP7	P12687	371 aa		5.17	□□□□□ -1.58
CDC42	YLR229C	MSP1	P28737	362 aa		5.17	□□□□□ -1.58
CDC42	YLR229C	CEM1	P39525	442 aa		5.17	□□□□□ -1.58
CDC42	YLR229C	SPO1	P53541	631 aa		5.17	□□□□□ -1.58
CDC42	YLR229C	KRE33	P53914	1056 aa	Known RBP	5.17	□□□□□ -1.58
CDC42	YLR229C	OYE2	Q03558	400 aa	Known RBP	5.17	□□□□□ -1.58
CDC42	YLR229C	ATG13	Q06628	738 aa		5.17	□□□□□ -1.58
CDC42	YLR229C	YDR306C	Q06640	478 aa		5.17	□□□□□ -1.58
CDC42	YLR229C	ALE1	Q08548	619 aa		5.17	□□□□□ -1.58
CDC42	YLR229C	MNL2	Q12205	849 aa		5.17	□□□□□ -1.58
CDC42	YLR229C	AIM44	Q99299	758 aa		5.17	□□□□□ -1.58
CDC42	YLR229C	PHO4	P07270	312 aa	Known RBP	5.16	□□□□□ -1.58
CDC42	YLR229C	ATE1	P16639	503 aa		5.16	□□□□□ -1.58
CDC42	YLR229C	RAD24	P32641	659 aa		5.16	□□□□□ -1.58
CDC42	YLR229C	KTR2	P33550	425 aa		5.16	□□□□□ -1.58
CDC42	YLR229C	ARL1	P38116	183 aa	Known RBP	5.16	□□□□□ -1.58
CDC42	YLR229C	SLN1	P39928	1220 aa	Predicted RBP	5.16	□□□□□ -1.58
CDC42	YLR229C	DAK2	P43550	591 aa		5.16	□□□□□ -1.58
CDC42	YLR229C	YGR122W	P53272	402 aa		5.16	□□□□□ -1.58
CDC42	YLR229C	DNM1	P54861	757 aa		5.16	□□□□□ -1.58
CDC42	YLR229C	TY1A-MR1	Q04215	440 aa		5.16	□□□□□ -1.58
CDC42	YLR229C	SVF1	Q05515	481 aa		5.16	□□□□□ -1.58
CDC42	YLR229C	IMH1	Q06704	911 aa	Known RBP	5.16	□□□□□ -1.58
CDC42	YLR229C	GPI13	Q07830	1017 aa		5.16	□□□□□ -1.58
CDC42	YLR229C	NOP58	Q12499	511 aa	Known RBP	5.16	□□□□□ -1.58
CDC42	YLR229C	SEC8	P32855	1065 aa		5.15	□□□□□ -1.59
CDC42	YLR229C	NMD2	P38798	1089 aa	Known RBP	5.15	□□□□□ -1.59
CDC42	YLR229C	YIL165C	P40446	119 aa		5.15	□□□□□ -1.59
CDC42	YLR229C	YBP2	P53169	641 aa		5.15	□□□□□ -1.59
CDC42	YLR229C	CAF120	P53836	1060 aa		5.15	□□□□□ -1.59
CDC42	YLR229C	CUZ1	P53899	274 aa		5.15	□□□□□ -1.59
CDC42	YLR229C	ZDS2	P54786	942 aa		5.15	□□□□□ -1.59
CDC42	YLR229C	ADE12	P80210	433 aa	Known RBP	5.15	□□□□□ -1.59
CDC42	YLR229C	RMT2	Q03305	412 aa		5.15	□□□□□ -1.59
CDC42	YLR229C	ROM2	P51862	1356 aa	Known RBP	5.15	□□□□□ -1.59
CDC42	YLR229C	GCD7	P32502	381 aa	Predicted RBP	5.14	□□□□□ -1.59
CDC42	YLR229C	PEP7	P32609	515 aa		5.14	□□□□□ -1.59
CDC42	YLR229C	RFC1	P38630	861 aa	Known RBP	5.14	□□□□□ -1.59
CDC42	YLR229C	BOI2	P39969	1040 aa		5.14	□□□□□ -1.59
CDC42	YLR229C	DJP1	P40564	432 aa		5.14	□□□□□ -1.59
CDC42	YLR229C	PPT1	P53043	513 aa		5.14	□□□□□ -1.59
CDC42	YLR229C	ITC1	P53125	1264 aa		5.14	□□□□□ -1.59
CDC42	YLR229C	NAM8	Q00539	523 aa	Known RBP	5.14	□□□□□ -1.59
CDC42	YLR229C	NKP2	Q06162	153 aa		5.14	□□□□□ -1.59
CDC42	YLR229C	EMG1	Q06287	252 aa	Known RBP	5.14	□□□□□ -1.59
CDC42	YLR229C	ESC2	Q06340	456 aa		5.14	□□□□□ -1.59
CDC42	YLR229C	SWC3	P31376	625 aa		5.13	□□□□□ -1.59

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