RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeastyeast

Gene CCC1, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC1YLR220W SRF1Q12516 437 aa17.68■□□□□ 0.42
CCC1YLR220W GPB2P39717 880 aa17.67■□□□□ 0.42
CCC1YLR220W PEX14P53112 341 aa17.67■□□□□ 0.42
CCC1YLR220W FAR11P53917 953 aa17.67■□□□□ 0.42
CCC1YLR220W MAK11P20484 414 aaKnown RBP17.66■□□□□ 0.42
CCC1YLR220W FMS1P50264 508 aa17.66■□□□□ 0.42
CCC1YLR220W HST1P53685 503 aa17.66■□□□□ 0.42
CCC1YLR220W NAF1P53919 492 aaKnown RBP17.66■□□□□ 0.42
CCC1YLR220W SPH1Q06160 661 aa17.66■□□□□ 0.42
CCC1YLR220W MBR1P23493 339 aa17.65■□□□□ 0.42
CCC1YLR220W CDC60P26637 1090 aaKnown RBP17.65■□□□□ 0.42
CCC1YLR220W RET3P53600 189 aa17.65■□□□□ 0.42
CCC1YLR220W GET3Q12154 354 aaKnown RBP17.65■□□□□ 0.42
CCC1YLR220W VMA2P16140 517 aaKnown RBP17.64■□□□□ 0.41
CCC1YLR220W PKC1P24583 1151 aa17.64■□□□□ 0.41
CCC1YLR220W PAN5P38787 379 aa17.64■□□□□ 0.41
CCC1YLR220W CSC1Q06538 782 aa17.64■□□□□ 0.41
CCC1YLR220W GUD1Q07729 489 aa17.64■□□□□ 0.41
CCC1YLR220W RDS1P25611 832 aa17.63■□□□□ 0.41
CCC1YLR220W UGA4P32837 571 aa17.63■□□□□ 0.41
CCC1YLR220W YKR018CP36114 725 aa17.63■□□□□ 0.41
CCC1YLR220W YAF9P53930 226 aa17.63■□□□□ 0.41
CCC1YLR220W GIS4Q04233 774 aa17.63■□□□□ 0.41
CCC1YLR220W TY3A-GQ12173 290 aa17.63■□□□□ 0.41
CCC1YLR220W TY3A-IQ99219 290 aa17.63■□□□□ 0.41
CCC1YLR220W PHR1P05066 565 aaKnown RBP RIP-Chip data17.62■□□□□ 0.41not detected
CCC1YLR220W NDT80P38830 627 aa17.62■□□□□ 0.41
CCC1YLR220W SAM1P10659 382 aaKnown RBP17.61■□□□□ 0.41
CCC1YLR220W PWP2P25635 923 aaKnown RBP17.61■□□□□ 0.41
CCC1YLR220W EUG1P32474 517 aa17.61■□□□□ 0.41
CCC1YLR220W PIL1P53252 339 aaKnown RBP17.61■□□□□ 0.41
CCC1YLR220W YLR326WQ06170 240 aaKnown RBP17.61■□□□□ 0.41
CCC1YLR220W UTR4P32626 227 aa17.6■□□□□ 0.41
CCC1YLR220W LIF1P53150 421 aa17.6■□□□□ 0.41
CCC1YLR220W CDC19P00549 500 aaKnown RBP17.59■□□□□ 0.41
CCC1YLR220W ELM1P32801 640 aa17.59■□□□□ 0.41
CCC1YLR220W HAP5Q02516 242 aa17.59■□□□□ 0.41
CCC1YLR220W YLR225CQ05948 407 aaKnown RBP17.59■□□□□ 0.41
CCC1YLR220W ARP8Q12386 881 aaKnown RBP RIP-Chip data17.59■□□□□ 0.41not detected
CCC1YLR220W TIP41Q12199 356 aa17.58■□□□□ 0.4
CCC1YLR220W SRO9P25567 434 aaKnown RBP17.57■□□□□ 0.4
CCC1YLR220W MCR1P36060 302 aaKnown RBP17.57■□□□□ 0.4
CCC1YLR220W YGR125WP53273 1036 aa17.57■□□□□ 0.4
CCC1YLR220W BNI5P53890 448 aaKnown RBP17.57■□□□□ 0.4
CCC1YLR220W SMD2Q06217 110 aaKnown RBP17.57■□□□□ 0.4
CCC1YLR220W PEX19Q07418 342 aa17.57■□□□□ 0.4
CCC1YLR220W THR4P16120 514 aaKnown RBP17.56■□□□□ 0.4
CCC1YLR220W SAS3P34218 831 aa17.56■□□□□ 0.4
CCC1YLR220W RRD1P40454 393 aaKnown RBP17.56■□□□□ 0.4
CCC1YLR220W YGL081WP53156 320 aa17.56■□□□□ 0.4
CCC1YLR220W ISA1Q07821 250 aaPredicted RBP17.56■□□□□ 0.4
CCC1YLR220W TY1B-AO13527 1196 aaKnown RBP17.55■□□□□ 0.4
CCC1YLR220W ALG1P16661 449 aa17.55■□□□□ 0.4
CCC1YLR220W MCM3P24279 971 aaKnown RBP17.55■□□□□ 0.4
CCC1YLR220W RFT1P38206 574 aaPredicted RBP17.55■□□□□ 0.4
CCC1YLR220W SUL1P38359 859 aa17.55■□□□□ 0.4
CCC1YLR220W STT3P39007 718 aaKnown RBP17.55■□□□□ 0.4
CCC1YLR220W DUS3Q06053 668 aaKnown RBP17.55■□□□□ 0.4
CCC1YLR220W PTC5Q12511 572 aa17.55■□□□□ 0.4
CCC1YLR220W VPS29P38759 282 aa17.54■□□□□ 0.4
CCC1YLR220W CIR1P42940 261 aa17.54■□□□□ 0.4
CCC1YLR220W CIT3P43635 486 aa17.54■□□□□ 0.4
CCC1YLR220W SLK19Q08581 821 aaKnown RBP17.54■□□□□ 0.4
CCC1YLR220W YOR296WQ08748 1289 aa17.54■□□□□ 0.4
CCC1YLR220W ARP6Q12509 438 aa17.54■□□□□ 0.4
CCC1YLR220W NBL1Q3E7Y6 73 aa17.54■□□□□ 0.4
CCC1YLR220W SHP1P34223 423 aa17.53■□□□□ 0.4
CCC1YLR220W DJP1P40564 432 aa17.53■□□□□ 0.4
CCC1YLR220W NCS6P53088 359 aa17.53■□□□□ 0.4
CCC1YLR220W PTA1Q01329 785 aaPredicted RBP17.53■□□□□ 0.4
CCC1YLR220W TRS120Q04183 1289 aa17.53■□□□□ 0.4
CCC1YLR220W CSM3Q04659 317 aa17.53■□□□□ 0.4
CCC1YLR220W URA1P28272 314 aaPredicted RBP17.52■□□□□ 0.4
CCC1YLR220W MSP1P28737 362 aa17.52■□□□□ 0.4
CCC1YLR220W DSE4P53753 1117 aa17.52■□□□□ 0.4
CCC1YLR220W ORC4P54791 529 aa17.52■□□□□ 0.4
CCC1YLR220W SGD1Q06132 899 aa17.52■□□□□ 0.4
CCC1YLR220W OXR1Q08952 273 aa17.52■□□□□ 0.4
CCC1YLR220W HXK1P04806 485 aaKnown RBP17.51■□□□□ 0.39
CCC1YLR220W KEX1P09620 729 aa17.51■□□□□ 0.39
CCC1YLR220W ATG32P40458 529 aa17.51■□□□□ 0.39
CCC1YLR220W RTC4P53850 401 aa17.51■□□□□ 0.39
CCC1YLR220W OYE2Q03558 400 aaKnown RBP17.51■□□□□ 0.39
CCC1YLR220W EIS1Q05050 843 aaKnown RBP17.51■□□□□ 0.39
CCC1YLR220W DUS4Q06063 367 aa17.51■□□□□ 0.39
CCC1YLR220W WHI4Q07655 649 aaKnown RBP17.51■□□□□ 0.39
CCC1YLR220W ERP3Q12403 225 aa17.51■□□□□ 0.39
CCC1YLR220W MXR1P40029 184 aa17.5■□□□□ 0.39
CCC1YLR220W ATG1P53104 897 aa17.5■□□□□ 0.39
CCC1YLR220W AIM44Q99299 758 aa17.5■□□□□ 0.39
CCC1YLR220W FRS2P15625 503 aaKnown RBP17.49■□□□□ 0.39
CCC1YLR220W CUE3P53137 624 aaKnown RBP17.49■□□□□ 0.39
CCC1YLR220W DDP1Q99321 188 aaKnown RBP17.49■□□□□ 0.39
CCC1YLR220W RGP1P16664 663 aa17.48■□□□□ 0.39
CCC1YLR220W TKL1P23254 680 aaKnown RBP17.48■□□□□ 0.39
CCC1YLR220W GAA1P39012 614 aa17.48■□□□□ 0.39
CCC1YLR220W CCT5P40413 562 aaKnown RBP17.48■□□□□ 0.39
CCC1YLR220W DAK2P43550 591 aa17.48■□□□□ 0.39
CCC1YLR220W YGR153WP48238 217 aa17.48■□□□□ 0.39
CCC1YLR220W YGR273CP53329 174 aa17.48■□□□□ 0.39
Retrieved 100 of 5,963 RNA–protein pairs in 73.2 ms