RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C ERS1P17261 260 aa5.13□□□□□ -1.59
SRP40YKR092C CLN2P20438 545 aa5.13□□□□□ -1.59
SRP40YKR092C NAM7P30771 971 aaKnown RBP5.13□□□□□ -1.59
SRP40YKR092C ATG14P38270 344 aa5.13□□□□□ -1.59
SRP40YKR092C AKR1P39010 764 aa5.13□□□□□ -1.59
SRP40YKR092C MRL1Q06815 381 aa5.13□□□□□ -1.59
SRP40YKR092C MED7Q08278 222 aa5.13□□□□□ -1.59
SRP40YKR092C HEM13P11353 328 aaKnown RBP5.12□□□□□ -1.59
SRP40YKR092C TAF13P11747 167 aa5.12□□□□□ -1.59
SRP40YKR092C RDH54P38086 958 aa5.12□□□□□ -1.59
SRP40YKR092C SAF1P38352 637 aa5.12□□□□□ -1.59
SRP40YKR092C NEM1P38757 446 aa5.12□□□□□ -1.59
SRP40YKR092C KIP3P53086 805 aaKnown RBP5.12□□□□□ -1.59
SRP40YKR092C VPS16Q03308 798 aa5.12□□□□□ -1.59
SRP40YKR092C UTP5Q04177 643 aaKnown RBP5.12□□□□□ -1.59
SRP40YKR092C RTT10Q08924 1013 aa5.12□□□□□ -1.59
SRP40YKR092C PIN2Q12057 282 aa5.12□□□□□ -1.59
SRP40YKR092C REC8Q12188 680 aa5.12□□□□□ -1.59
SRP40YKR092C CHS2P14180 963 aa5.11□□□□□ -1.59
SRP40YKR092C CDC34P14682 295 aa5.11□□□□□ -1.59
SRP40YKR092C RAD27P26793 382 aa5.11□□□□□ -1.59
SRP40YKR092C YGR130CP53278 816 aa5.11□□□□□ -1.59
SRP40YKR092C CWC24P53769 259 aa5.11□□□□□ -1.59
SRP40YKR092C HDA2Q06629 674 aa5.11□□□□□ -1.59
SRP40YKR092C AVO1Q08236 1176 aa5.11□□□□□ -1.59
SRP40YKR092C ALG6Q12001 544 aaKnown RBP5.11□□□□□ -1.59
SRP40YKR092C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
SRP40YKR092C ADD66P36040 267 aa5.1□□□□□ -1.59
SRP40YKR092C TOS1P38288 455 aa5.1□□□□□ -1.59
SRP40YKR092C VAC8P39968 578 aa5.1□□□□□ -1.59
SRP40YKR092C NCE103P53615 221 aa5.1□□□□□ -1.59
SRP40YKR092C ORC1P54784 914 aaPredicted RBP5.1□□□□□ -1.59
SRP40YKR092C EST2Q06163 884 aa5.1□□□□□ -1.59
SRP40YKR092C MAG2Q06436 670 aaKnown RBP5.1□□□□□ -1.59
SRP40YKR092C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
SRP40YKR092C TMA46Q12000 345 aaKnown RBP5.1□□□□□ -1.59
SRP40YKR092C YOR223WQ12015 292 aa5.1□□□□□ -1.59
SRP40YKR092C LIP5P32875 414 aa5.09□□□□□ -1.59
SRP40YKR092C SPO74P45819 413 aa5.09□□□□□ -1.59
SRP40YKR092C YGR045CP53229 120 aa5.09□□□□□ -1.59
SRP40YKR092C YNR063WP53749 607 aa5.09□□□□□ -1.59
SRP40YKR092C DED1P06634 604 aaKnown RBP5.08□□□□□ -1.6
SRP40YKR092C ELA1P53861 379 aaPredicted RBP5.08□□□□□ -1.6
SRP40YKR092C SIW14P53965 281 aa5.08□□□□□ -1.6
SRP40YKR092C ALD6P54115 500 aaKnown RBP5.08□□□□□ -1.6
SRP40YKR092C DOT1Q04089 582 aaKnown RBP5.08□□□□□ -1.6
SRP40YKR092C TY1B-DR4Q07793 1604 aa5.08□□□□□ -1.6
SRP40YKR092C DUT1P33317 147 aa5.07□□□□□ -1.6
SRP40YKR092C YAR028WP39548 234 aa5.07□□□□□ -1.6
SRP40YKR092C AVT1P47082 602 aa5.07□□□□□ -1.6
SRP40YKR092C CTH1P47976 325 aa5.07□□□□□ -1.6
SRP40YKR092C GNP1P48813 663 aa5.07□□□□□ -1.6
SRP40YKR092C GDE1Q02979 1223 aa5.07□□□□□ -1.6
SRP40YKR092C RKM2Q03942 479 aa5.07□□□□□ -1.6
SRP40YKR092C LAP2Q10740 671 aa5.07□□□□□ -1.6
SRP40YKR092C HSL1P34244 1518 aa5.07□□□□□ -1.6
SRP40YKR092C PUB1P32588 453 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
SRP40YKR092C DEF1P35732 738 aaKnown RBP5.06□□□□□ -1.6
SRP40YKR092C GPT2P36148 743 aa5.06□□□□□ -1.6
SRP40YKR092C HSE1P38753 452 aa5.06□□□□□ -1.6
SRP40YKR092C IRC24P40580 263 aa5.06□□□□□ -1.6
SRP40YKR092C ENT3P47160 408 aa5.06□□□□□ -1.6
SRP40YKR092C ROD1Q02805 837 aa5.06□□□□□ -1.6
SRP40YKR092C SPT6P23615 1451 aaKnown RBP5.06□□□□□ -1.6
SRP40YKR092C CYC7P00045 113 aa5.05□□□□□ -1.6
SRP40YKR092C MKK2P32491 506 aa5.05□□□□□ -1.6
SRP40YKR092C RER2P35196 286 aa5.05□□□□□ -1.6
SRP40YKR092C HXT13P39924 564 aa5.05□□□□□ -1.6
SRP40YKR092C FAA4P47912 694 aaKnown RBP5.05□□□□□ -1.6
SRP40YKR092C YGR053CP53234 283 aa5.05□□□□□ -1.6
SRP40YKR092C HXT17P53631 564 aa5.05□□□□□ -1.6
SRP40YKR092C HXT15P54854 567 aa5.05□□□□□ -1.6
SRP40YKR092C BRE4Q07660 1125 aa5.05□□□□□ -1.6
SRP40YKR092C MSH4P40965 878 aaPredicted RBP5.04□□□□□ -1.6
SRP40YKR092C GIC2Q06648 383 aa5.04□□□□□ -1.6
SRP40YKR092C CHD1P32657 1468 aa5.03□□□□□ -1.6
SRP40YKR092C RET1P22276 1149 aaKnown RBP5.03□□□□□ -1.6
SRP40YKR092C SYP1P25623 870 aaKnown RBP5.03□□□□□ -1.6
SRP40YKR092C AFG2P32794 780 aa5.03□□□□□ -1.6
SRP40YKR092C NNK1P36003 928 aa5.03□□□□□ -1.6
SRP40YKR092C TYW3P53177 273 aa5.03□□□□□ -1.6
SRP40YKR092C RAT1Q02792 1006 aaKnown RBP5.03□□□□□ -1.6
SRP40YKR092C EEB1Q02891 456 aa5.03□□□□□ -1.6
SRP40YKR092C WRS1Q12109 432 aaKnown RBP5.03□□□□□ -1.6
SRP40YKR092C LYP1P32487 611 aa5.02□□□□□ -1.61
SRP40YKR092C SMY2P32909 740 aaKnown RBP5.02□□□□□ -1.61
SRP40YKR092C VPS53P47061 822 aa5.02□□□□□ -1.61
SRP40YKR092C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
SRP40YKR092C PTC5Q12511 572 aa5.02□□□□□ -1.61
SRP40YKR092C TRP2P00899 507 aaKnown RBP5.01□□□□□ -1.61
SRP40YKR092C RPS4AP0CX35 261 aaKnown RBP5.01□□□□□ -1.61
SRP40YKR092C RPS4BP0CX36 261 aaKnown RBP5.01□□□□□ -1.61
SRP40YKR092C PRI2P20457 528 aa5.01□□□□□ -1.61
SRP40YKR092C NFS1P25374 497 aa5.01□□□□□ -1.61
SRP40YKR092C ALG3P38179 458 aa5.01□□□□□ -1.61
SRP40YKR092C QNS1P38795 714 aaKnown RBP5.01□□□□□ -1.61
SRP40YKR092C RSA3Q05942 220 aaKnown RBP5.01□□□□□ -1.61
SRP40YKR092C YLR257WQ06146 321 aaKnown RBP5.01□□□□□ -1.61
SRP40YKR092C OPI10Q08202 246 aa5.01□□□□□ -1.61
SRP40YKR092C FAL1Q12099 399 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 82.3 ms