RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeastyeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA2YKR077W HDA2Q06629 674 aa7.59□□□□□ -1.19
MSA2YKR077W ALG6Q12001 544 aaKnown RBP7.59□□□□□ -1.19
MSA2YKR077W GCR1P07261 785 aa7.58□□□□□ -1.2
MSA2YKR077W CLN2P20438 545 aa7.58□□□□□ -1.2
MSA2YKR077W LIP5P32875 414 aa7.58□□□□□ -1.2
MSA2YKR077W ATG14P38270 344 aa7.58□□□□□ -1.2
MSA2YKR077W MAD1P40957 749 aa7.58□□□□□ -1.2
MSA2YKR077W DOT1Q04089 582 aaKnown RBP7.58□□□□□ -1.2
MSA2YKR077W RTT10Q08924 1013 aa7.57□□□□□ -1.2
MSA2YKR077W SPO74P45819 413 aa7.56□□□□□ -1.2
MSA2YKR077W EST2Q06163 884 aa7.56□□□□□ -1.2
MSA2YKR077W AVO1Q08236 1176 aa7.56□□□□□ -1.2
MSA2YKR077W ADD66P36040 267 aa7.55□□□□□ -1.2
MSA2YKR077W GNP1P48813 663 aa7.55□□□□□ -1.2
MSA2YKR077W YGR045CP53229 120 aa7.55□□□□□ -1.2
MSA2YKR077W SIW14P53965 281 aa7.55□□□□□ -1.2
MSA2YKR077W VPS16Q03308 798 aa7.55□□□□□ -1.2
MSA2YKR077W PIN2Q12057 282 aa7.55□□□□□ -1.2
MSA2YKR077W CDC34P14682 295 aa7.54□□□□□ -1.2
MSA2YKR077W GPT2P36148 743 aa7.54□□□□□ -1.2
MSA2YKR077W YAR028WP39548 234 aa7.54□□□□□ -1.2
MSA2YKR077W ENT3P47160 408 aa7.54□□□□□ -1.2
MSA2YKR077W RKM2Q03942 479 aa7.54□□□□□ -1.2
MSA2YKR077W DED1P06634 604 aaKnown RBP7.53□□□□□ -1.2
MSA2YKR077W RAD27P26793 382 aa7.53□□□□□ -1.2
MSA2YKR077W ELA1P53861 379 aaPredicted RBP7.53□□□□□ -1.2
MSA2YKR077W LAP2Q10740 671 aa7.53□□□□□ -1.2
MSA2YKR077W CYC7P00045 113 aa7.52□□□□□ -1.21
MSA2YKR077W PUB1P32588 453 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
MSA2YKR077W DUT1P33317 147 aa7.52□□□□□ -1.21
MSA2YKR077W HXT13P39924 564 aa7.52□□□□□ -1.21
MSA2YKR077W CTH1P47976 325 aa7.52□□□□□ -1.21
MSA2YKR077W HXT17P53631 564 aa7.52□□□□□ -1.21
MSA2YKR077W YNR063WP53749 607 aa7.52□□□□□ -1.21
MSA2YKR077W HXT15P54854 567 aa7.52□□□□□ -1.21
MSA2YKR077W ROD1Q02805 837 aa7.52□□□□□ -1.21
MSA2YKR077W BRE4Q07660 1125 aa7.52□□□□□ -1.21
MSA2YKR077W TMA46Q12000 345 aaKnown RBP7.52□□□□□ -1.21
MSA2YKR077W HSE1P38753 452 aa7.51□□□□□ -1.21
MSA2YKR077W MAG2Q06436 670 aaKnown RBP7.51□□□□□ -1.21
MSA2YKR077W GIC2Q06648 383 aa7.51□□□□□ -1.21
MSA2YKR077W MSH4P40965 878 aaPredicted RBP7.5□□□□□ -1.21
MSA2YKR077W AVT1P47082 602 aa7.5□□□□□ -1.21
MSA2YKR077W CWC24P53769 259 aa7.5□□□□□ -1.21
MSA2YKR077W NNK1P36003 928 aa7.49□□□□□ -1.21
MSA2YKR077W IRC24P40580 263 aa7.49□□□□□ -1.21
MSA2YKR077W MSB1P21339 1137 aaKnown RBP7.48□□□□□ -1.21
MSA2YKR077W MKK2P32491 506 aa7.48□□□□□ -1.21
MSA2YKR077W SMY2P32909 740 aaKnown RBP7.48□□□□□ -1.21
MSA2YKR077W VAC8P39968 578 aa7.48□□□□□ -1.21
MSA2YKR077W FAA4P47912 694 aaKnown RBP7.48□□□□□ -1.21
MSA2YKR077W ALD6P54115 500 aaKnown RBP7.48□□□□□ -1.21
MSA2YKR077W GDE1Q02979 1223 aa7.48□□□□□ -1.21
MSA2YKR077W NFS1P25374 497 aa7.47□□□□□ -1.21
MSA2YKR077W AFG2P32794 780 aa7.47□□□□□ -1.21
MSA2YKR077W RAT1Q02792 1006 aaKnown RBP7.47□□□□□ -1.21
MSA2YKR077W SYP1P25623 870 aaKnown RBP7.46□□□□□ -1.22
MSA2YKR077W RER2P35196 286 aa7.46□□□□□ -1.22
MSA2YKR077W VPS53P47061 822 aa7.46□□□□□ -1.22
MSA2YKR077W ALT1P52893 592 aa7.46□□□□□ -1.22
MSA2YKR077W EEB1Q02891 456 aa7.46□□□□□ -1.22
MSA2YKR077W RSA3Q05942 220 aaKnown RBP7.46□□□□□ -1.22
MSA2YKR077W RET1P22276 1149 aaKnown RBP7.45□□□□□ -1.22
MSA2YKR077W ALG3P38179 458 aa7.45□□□□□ -1.22
MSA2YKR077W YGR053CP53234 283 aa7.45□□□□□ -1.22
MSA2YKR077W YLR257WQ06146 321 aaKnown RBP7.45□□□□□ -1.22
MSA2YKR077W PTC5Q12511 572 aa7.45□□□□□ -1.22
MSA2YKR077W TRP2P00899 507 aaKnown RBP7.44□□□□□ -1.22
MSA2YKR077W RPS4AP0CX35 261 aaKnown RBP7.44□□□□□ -1.22
MSA2YKR077W RPS4BP0CX36 261 aaKnown RBP7.44□□□□□ -1.22
MSA2YKR077W QNS1P38795 714 aaKnown RBP7.44□□□□□ -1.22
MSA2YKR077W LYP1P32487 611 aa7.43□□□□□ -1.22
MSA2YKR077W MMM1P41800 426 aa7.43□□□□□ -1.22
MSA2YKR077W CNN1P43618 361 aa7.43□□□□□ -1.22
MSA2YKR077W SDH1Q00711 640 aa7.43□□□□□ -1.22
MSA2YKR077W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
MSA2YKR077W HRK1Q08732 759 aaKnown RBP7.43□□□□□ -1.22
MSA2YKR077W TYW3P53177 273 aa7.42□□□□□ -1.22
MSA2YKR077W DBP5P20449 482 aaKnown RBP7.41□□□□□ -1.22
MSA2YKR077W WHI3P34761 661 aaKnown RBP7.41□□□□□ -1.22
MSA2YKR077W TPP1Q03796 238 aa7.41□□□□□ -1.22
MSA2YKR077W TIF35Q04067 274 aaKnown RBP7.41□□□□□ -1.22
MSA2YKR077W PUS7Q08647 676 aaKnown RBP7.41□□□□□ -1.22
MSA2YKR077W SEA4P38164 1038 aa7.4□□□□□ -1.22
MSA2YKR077W CIT3P43635 486 aa7.4□□□□□ -1.22
MSA2YKR077W EAR1Q03212 550 aa7.4□□□□□ -1.22
MSA2YKR077W SPO20Q04359 397 aa7.4□□□□□ -1.22
MSA2YKR077W FAL1Q12099 399 aaKnown RBP7.4□□□□□ -1.22
MSA2YKR077W GCD1P09032 578 aaPredicted RBP7.39□□□□□ -1.23
MSA2YKR077W RGD1P38339 666 aa7.39□□□□□ -1.23
MSA2YKR077W NMD3P38861 518 aaKnown RBP7.39□□□□□ -1.23
MSA2YKR077W AOS1Q06624 347 aa7.39□□□□□ -1.23
MSA2YKR077W YOR059CQ08448 450 aaKnown RBP7.39□□□□□ -1.23
MSA2YKR077W KIP1P28742 1111 aa7.38□□□□□ -1.23
MSA2YKR077W MCM7P38132 845 aa7.38□□□□□ -1.23
MSA2YKR077W YJL045WP47052 634 aa7.38□□□□□ -1.23
MSA2YKR077W HNT2P49775 206 aa7.38□□□□□ -1.23
MSA2YKR077W OPI10Q08202 246 aa7.38□□□□□ -1.23
MSA2YKR077W YPL260WQ08977 551 aa7.38□□□□□ -1.23
MSA2YKR077W PRI2P20457 528 aa7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms