RNA–Protein interactions for RNA: YKL113C

RAD27, Transcript of 5' to 3' exonuclease, 5' flap endonuclease, yeast

Gene RAD27, Length 1,149 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD27	YKL113C	DID4	P36108	232 aa		4.86	□□□□□ -1.63
RAD27	YKL113C	MIC60	P36112	540 aa		4.86	□□□□□ -1.63
RAD27	YKL113C	GRX7	P38068	203 aa		4.86	□□□□□ -1.63
RAD27	YKL113C	RFC5	P38251	354 aa		4.86	□□□□□ -1.63
RAD27	YKL113C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
RAD27	YKL113C	YMR147W	P40218	223 aa	Known RBP	4.86	□□□□□ -1.63
RAD27	YKL113C	IRC8	P47046	822 aa		4.86	□□□□□ -1.63
RAD27	YKL113C	ENP2	P48234	707 aa	Known RBP	4.86	□□□□□ -1.63
RAD27	YKL113C	LYS4	P49367	693 aa	Predicted RBP	4.86	□□□□□ -1.63
RAD27	YKL113C	HST2	P53686	357 aa		4.86	□□□□□ -1.63
RAD27	YKL113C	ALD3	P54114	506 aa		4.86	□□□□□ -1.63
RAD27	YKL113C	CTR9	P89105	1077 aa		4.86	□□□□□ -1.63
RAD27	YKL113C	CTI6	Q08923	506 aa		4.86	□□□□□ -1.63
RAD27	YKL113C	COQ1	P18900	473 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	KRE2	P27809	442 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	MCM2	P29469	868 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	RER2	P35196	286 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	TOS1	P38288	455 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	NPR3	P38742	1146 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	BUD6	P41697	788 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	ENT3	P47160	408 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	YGR130C	P53278	816 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	FAR11	P53917	953 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	YNL011C	P53980	444 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	INM2	Q05533	292 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	EST2	Q06163	884 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	BDF2	Q07442	638 aa		4.85	□□□□□ -1.63
RAD27	YKL113C	HSC82	P15108	705 aa	Known RBP	4.84	□□□□□ -1.63
RAD27	YKL113C	LCB1	P25045	558 aa	Known RBP	4.84	□□□□□ -1.63
RAD27	YKL113C	MRPL10	P36520	322 aa		4.84	□□□□□ -1.63
RAD27	YKL113C	SPL2	P38839	148 aa		4.84	□□□□□ -1.63
RAD27	YKL113C	YPT11	P48559	417 aa		4.84	□□□□□ -1.63
RAD27	YKL113C	NIS1	P53939	407 aa		4.84	□□□□□ -1.63
RAD27	YKL113C	RPS15	Q01855	142 aa	Known RBP	4.84	□□□□□ -1.63
RAD27	YKL113C	GRX3	Q03835	250 aa		4.84	□□□□□ -1.63
RAD27	YKL113C	MMP1	Q12372	583 aa		4.84	□□□□□ -1.63
RAD27	YKL113C	TRS33	Q99394	268 aa		4.84	□□□□□ -1.63
RAD27	YKL113C	RPL22A	P05749	121 aa	Known RBP	4.83	□□□□□ -1.64
RAD27	YKL113C	GPA1	P08539	472 aa		4.83	□□□□□ -1.64
RAD27	YKL113C	ATE1	P16639	503 aa		4.83	□□□□□ -1.64
RAD27	YKL113C	FRD1	P32614	470 aa	Known RBP	4.83	□□□□□ -1.64
RAD27	YKL113C	BMH2	P34730	273 aa	Known RBP	4.83	□□□□□ -1.64
RAD27	YKL113C	ISW1	P38144	1129 aa		4.83	□□□□□ -1.64
RAD27	YKL113C	TFG2	P41896	400 aa	Predicted RBP	4.83	□□□□□ -1.64
RAD27	YKL113C	CTH1	P47976	325 aa		4.83	□□□□□ -1.64
RAD27	YKL113C	FPK1	P53739	893 aa		4.83	□□□□□ -1.64
RAD27	YKL113C	YDR444W	Q04093	687 aa		4.83	□□□□□ -1.64
RAD27	YKL113C	YSH1	Q06224	779 aa	Predicted RBP	4.83	□□□□□ -1.64
RAD27	YKL113C	ERF2	Q06551	359 aa		4.83	□□□□□ -1.64
RAD27	YKL113C	PSF3	Q12146	194 aa		4.83	□□□□□ -1.64
RAD27	YKL113C	PMD1	P32634	1753 aa		4.83	□□□□□ -1.64
RAD27	YKL113C	HKR1	P41809	1802 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	CHO2	P05374	869 aa	Known RBP	4.82	□□□□□ -1.64
RAD27	YKL113C	KEX2	P13134	814 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	CYC8	P14922	966 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
RAD27	YKL113C	GSY2	P27472	705 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	SPC110	P32380	944 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	MYO3	P36006	1272 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	YKT6	P36015	200 aa	Known RBP	4.82	□□□□□ -1.64
RAD27	YKL113C	BOI1	P38041	980 aa	Known RBP	4.82	□□□□□ -1.64
RAD27	YKL113C	PFF1	P38244	976 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	RRM3	P38766	723 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	RTS1	P38903	757 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	RPL34B	P40525	121 aa	Known RBP	4.82	□□□□□ -1.64
RAD27	YKL113C	YIR042C	P40586	236 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	YFH7	P43591	353 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	ALD2	P47771	506 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	IRC4	Q03036	179 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	HED1	Q03937	162 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	DCS2	Q12123	353 aa		4.82	□□□□□ -1.64
RAD27	YKL113C	SWI4	P25302	1093 aa	Known RBP	4.81	□□□□□ -1.64
RAD27	YKL113C	PAT1	P25644	796 aa	Known RBP	4.81	□□□□□ -1.64
RAD27	YKL113C	CDC11	P32458	415 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	ANP1	P32629	500 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	PTK1	P36002	662 aa	Predicted RBP	4.81	□□□□□ -1.64
RAD27	YKL113C	MAL31	P38156	614 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	YBL036C	P38197	257 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	RPN10	P38886	268 aa	Known RBP	4.81	□□□□□ -1.64
RAD27	YKL113C	RRP8	P38961	392 aa	Known RBP	4.81	□□□□□ -1.64
RAD27	YKL113C	AKR1	P39010	764 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	YER130C	P39959	443 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	RPT2	P40327	437 aa	Known RBP	4.81	□□□□□ -1.64
RAD27	YKL113C	EPL1	P43572	832 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	STU2	P46675	888 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	RPT4	P53549	437 aa	Known RBP	4.81	□□□□□ -1.64
RAD27	YKL113C	SSL2	Q00578	843 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	YML020W	Q03722	664 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	UBX2	Q04228	584 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	SGD1	Q06132	899 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	IRC3	Q06683	689 aa		4.81	□□□□□ -1.64
RAD27	YKL113C	RIX7	Q07844	837 aa	Known RBP	4.81	□□□□□ -1.64
RAD27	YKL113C	SNF3	P10870	884 aa		4.8	□□□□□ -1.64
RAD27	YKL113C	MCM3	P24279	971 aa	Known RBP	4.8	□□□□□ -1.64
RAD27	YKL113C	MCM4	P30665	933 aa	Known RBP	4.8	□□□□□ -1.64
RAD27	YKL113C	HOS4	P40480	1083 aa		4.8	□□□□□ -1.64
RAD27	YKL113C	ALG2	P43636	503 aa		4.8	□□□□□ -1.64
RAD27	YKL113C	PTK2	P47116	818 aa	Known RBP	4.8	□□□□□ -1.64
RAD27	YKL113C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
RAD27	YKL113C	VPS4	P52917	437 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 75.4 ms