RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W GCD14P46959 383 aaPredicted RBP7.34□□□□□ -1.24
NMD5YJR132W ESC8Q08119 714 aa7.34□□□□□ -1.24
NMD5YJR132W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
NMD5YJR132W MAK5P38112 773 aaPredicted RBP7.33□□□□□ -1.24
NMD5YJR132W MAD1P40957 749 aa7.33□□□□□ -1.24
NMD5YJR132W SAS4Q04003 481 aa7.33□□□□□ -1.24
NMD5YJR132W TAF11Q04226 346 aa7.33□□□□□ -1.24
NMD5YJR132W DPH2P32461 534 aa7.33□□□□□ -1.24
NMD5YJR132W YEL043WP32618 956 aa7.33□□□□□ -1.24
NMD5YJR132W TIF5P38431 405 aaKnown RBP7.33□□□□□ -1.24
NMD5YJR132W HST1P53685 503 aa7.33□□□□□ -1.24
NMD5YJR132W YDR090CQ03193 310 aa7.33□□□□□ -1.24
NMD5YJR132W TY1B-DR4Q07793 1604 aa7.33□□□□□ -1.24
NMD5YJR132W MRPL40P36534 297 aa7.32□□□□□ -1.24
NMD5YJR132W RIM11P38615 370 aa7.32□□□□□ -1.24
NMD5YJR132W FOL2P51601 243 aaKnown RBP7.32□□□□□ -1.24
NMD5YJR132W YNL144CP53907 740 aa7.32□□□□□ -1.24
NMD5YJR132W SRO9P25567 434 aaKnown RBP7.32□□□□□ -1.24
NMD5YJR132W RIB7P33312 244 aa7.32□□□□□ -1.24
NMD5YJR132W BMH2P34730 273 aaKnown RBP7.32□□□□□ -1.24
NMD5YJR132W RTS1P38903 757 aa7.32□□□□□ -1.24
NMD5YJR132W ATH1P48016 1211 aa7.32□□□□□ -1.24
NMD5YJR132W TRF5P48561 642 aaKnown RBP7.32□□□□□ -1.24
NMD5YJR132W SWI1P09547 1314 aa7.32□□□□□ -1.24
NMD5YJR132W ASF2P32448 525 aaPredicted RBP7.32□□□□□ -1.24
NMD5YJR132W PBP2P38151 413 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
NMD5YJR132W TEA1P47988 759 aa7.32□□□□□ -1.24
NMD5YJR132W LSC1P53598 329 aaKnown RBP7.32□□□□□ -1.24
NMD5YJR132W SEC2P17065 759 aa7.31□□□□□ -1.24
NMD5YJR132W SUI2P20459 304 aaKnown RBP7.31□□□□□ -1.24
NMD5YJR132W HSP104P31539 908 aaKnown RBP7.31□□□□□ -1.24
NMD5YJR132W ECM4P36156 370 aa7.31□□□□□ -1.24
NMD5YJR132W YHR219WP38900 624 aa7.31□□□□□ -1.24
NMD5YJR132W SPR3P41901 512 aa7.31□□□□□ -1.24
NMD5YJR132W RAT1Q02792 1006 aaKnown RBP7.31□□□□□ -1.24
NMD5YJR132W ARO80Q04052 950 aa7.31□□□□□ -1.24
NMD5YJR132W REC8Q12188 680 aa7.31□□□□□ -1.24
NMD5YJR132W RPC40P07703 335 aaKnown RBP7.31□□□□□ -1.24
NMD5YJR132W TPS2P31688 896 aaKnown RBP7.31□□□□□ -1.24
NMD5YJR132W TFB1P32776 642 aa7.31□□□□□ -1.24
NMD5YJR132W PMA2P19657 947 aa7.3□□□□□ -1.24
NMD5YJR132W ROX1P25042 368 aa7.3□□□□□ -1.24
NMD5YJR132W MRC1P25588 1096 aa7.3□□□□□ -1.24
NMD5YJR132W CDC48P25694 835 aaKnown RBP7.3□□□□□ -1.24
NMD5YJR132W YKL050CP35736 922 aa7.3□□□□□ -1.24
NMD5YJR132W ALD5P40047 520 aaKnown RBP7.3□□□□□ -1.24
NMD5YJR132W MNT3P40549 630 aa7.3□□□□□ -1.24
NMD5YJR132W YIR014WP40570 242 aa7.3□□□□□ -1.24
NMD5YJR132W MPD2Q99316 277 aa7.3□□□□□ -1.24
NMD5YJR132W REC107P21651 314 aa7.3□□□□□ -1.24
NMD5YJR132W VMA8P32610 256 aaKnown RBP7.3□□□□□ -1.24
NMD5YJR132W NUP120P35729 1037 aa7.3□□□□□ -1.24
NMD5YJR132W YSW1P38280 609 aa7.3□□□□□ -1.24
NMD5YJR132W HAL5P38970 855 aaKnown RBP7.3□□□□□ -1.24
NMD5YJR132W PEX14P53112 341 aa7.3□□□□□ -1.24
NMD5YJR132W NCS2P53923 493 aaPredicted RBP7.3□□□□□ -1.24
NMD5YJR132W NIS1P53939 407 aa7.3□□□□□ -1.24
NMD5YJR132W COG6P53959 839 aa7.3□□□□□ -1.24
NMD5YJR132W SND1Q04007 877 aa7.3□□□□□ -1.24
NMD5YJR132W PGI1P12709 554 aaKnown RBP7.29□□□□□ -1.24
NMD5YJR132W PSY4P38193 441 aa7.29□□□□□ -1.24
NMD5YJR132W NUP85P46673 744 aa7.29□□□□□ -1.24
NMD5YJR132W STB3Q12427 513 aa7.29□□□□□ -1.24
NMD5YJR132W YOL087CQ99247 1116 aa7.29□□□□□ -1.24
NMD5YJR132W YRF1-4O13559 1382 aa7.29□□□□□ -1.24
NMD5YJR132W YML133CQ03099 1374 aa7.29□□□□□ -1.24
NMD5YJR132W YLL067CQ07888 1374 aa7.29□□□□□ -1.24
NMD5YJR132W YLL066CQ99208 1374 aa7.29□□□□□ -1.24
NMD5YJR132W XRS2P33301 854 aa7.29□□□□□ -1.24
NMD5YJR132W RGA1P39083 1007 aa7.29□□□□□ -1.24
NMD5YJR132W ESL1P40456 1118 aa7.29□□□□□ -1.24
NMD5YJR132W MET12P46151 657 aa7.29□□□□□ -1.24
NMD5YJR132W UTP22P53254 1237 aaPredicted RBP7.29□□□□□ -1.24
NMD5YJR132W YLR326WQ06170 240 aaKnown RBP7.29□□□□□ -1.24
NMD5YJR132W SSN2P38931 1420 aa7.29□□□□□ -1.24
NMD5YJR132W ERG12P07277 443 aa7.28□□□□□ -1.24
NMD5YJR132W PRS1P32895 427 aaKnown RBP7.28□□□□□ -1.24
NMD5YJR132W PIH1P38768 344 aa7.28□□□□□ -1.24
NMD5YJR132W SLN1P39928 1220 aaPredicted RBP7.28□□□□□ -1.24
NMD5YJR132W POL32P47110 350 aa7.28□□□□□ -1.24
NMD5YJR132W YGR067CP53243 804 aa7.28□□□□□ -1.24
NMD5YJR132W RNT1Q02555 471 aa7.28□□□□□ -1.24
NMD5YJR132W YKU80Q04437 629 aa7.28□□□□□ -1.24
NMD5YJR132W LAP2Q10740 671 aa7.28□□□□□ -1.24
NMD5YJR132W OSH2Q12451 1283 aa7.28□□□□□ -1.24
NMD5YJR132W MAK11P20484 414 aaKnown RBP7.28□□□□□ -1.24
NMD5YJR132W SLA1P32790 1244 aa7.28□□□□□ -1.24
NMD5YJR132W YHB1P39676 399 aaKnown RBP7.28□□□□□ -1.24
NMD5YJR132W ARG81P05085 880 aa7.27□□□□□ -1.24
NMD5YJR132W PRP22P24384 1145 aaKnown RBP7.27□□□□□ -1.24
NMD5YJR132W MSH2P25847 964 aa7.27□□□□□ -1.24
NMD5YJR132W STE6P12866 1290 aa7.27□□□□□ -1.25
NMD5YJR132W GUT1P32190 709 aa7.27□□□□□ -1.25
NMD5YJR132W DOM34P33309 386 aa7.27□□□□□ -1.25
NMD5YJR132W MSR1P38714 643 aa7.27□□□□□ -1.25
NMD5YJR132W ARP5P53946 755 aa7.27□□□□□ -1.25
NMD5YJR132W CEG1Q01159 459 aaPredicted RBP7.27□□□□□ -1.25
NMD5YJR132W UBP2Q01476 1272 aa7.27□□□□□ -1.25
NMD5YJR132W MUB1Q03162 620 aa7.27□□□□□ -1.25
NMD5YJR132W YML083CQ04526 418 aa7.27□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms