RNA–Protein interactions for RNA: YJR083C

ACF4, Transcript of Protein of unknown function, yeast

Gene ACF4, Length 930 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ACF4	YJR083C	YAR028W	P39548	234 aa		4.85	□□□□□ -1.63
ACF4	YJR083C	SAM37	P50110	327 aa		4.85	□□□□□ -1.63
ACF4	YJR083C	YDL177C	Q12257	170 aa		4.85	□□□□□ -1.63
ACF4	YJR083C	RET1	P22276	1149 aa	Known RBP	4.84	□□□□□ -1.63
ACF4	YJR083C	NEM1	P38757	446 aa		4.84	□□□□□ -1.63
ACF4	YJR083C	CIC1	P38779	376 aa	Known RBP	4.84	□□□□□ -1.63
ACF4	YJR083C	MTR4	P47047	1073 aa	Known RBP	4.84	□□□□□ -1.63
ACF4	YJR083C	RIM8	P53179	542 aa		4.84	□□□□□ -1.63
ACF4	YJR083C	YHL012W	P38709	493 aa		4.83	□□□□□ -1.64
ACF4	YJR083C	ETP1	P38748	585 aa	Known RBP	4.83	□□□□□ -1.64
ACF4	YJR083C	FOL2	P51601	243 aa	Known RBP	4.83	□□□□□ -1.64
ACF4	YJR083C	YLR257W	Q06146	321 aa	Known RBP	4.83	□□□□□ -1.64
ACF4	YJR083C	HDA2	Q06629	674 aa		4.83	□□□□□ -1.64
ACF4	YJR083C	GPI13	Q07830	1017 aa		4.83	□□□□□ -1.64
ACF4	YJR083C	WHI5	Q12416	295 aa		4.83	□□□□□ -1.64
ACF4	YJR083C	SAM35	P14693	329 aa		4.82	□□□□□ -1.64
ACF4	YJR083C	HSE1	P38753	452 aa		4.82	□□□□□ -1.64
ACF4	YJR083C	NMD3	P38861	518 aa	Known RBP	4.82	□□□□□ -1.64
ACF4	YJR083C	NOG1	Q02892	647 aa	Known RBP	4.82	□□□□□ -1.64
ACF4	YJR083C	YCS4	Q06156	1176 aa		4.82	□□□□□ -1.64
ACF4	YJR083C	SOD2	P00447	233 aa		4.81	□□□□□ -1.64
ACF4	YJR083C	HEM3	P28789	327 aa		4.81	□□□□□ -1.64
ACF4	YJR083C	MET4	P32389	672 aa		4.81	□□□□□ -1.64
ACF4	YJR083C	MDL2	P33311	773 aa		4.81	□□□□□ -1.64
ACF4	YJR083C	HRK1	Q08732	759 aa	Known RBP	4.81	□□□□□ -1.64
ACF4	YJR083C	LAP2	Q10740	671 aa		4.81	□□□□□ -1.64
ACF4	YJR083C	UTP5	Q04177	643 aa	Known RBP	4.8	□□□□□ -1.64
ACF4	YJR083C	RSA3	Q05942	220 aa	Known RBP	4.8	□□□□□ -1.64
ACF4	YJR083C	OXR1	Q08952	273 aa		4.8	□□□□□ -1.64
ACF4	YJR083C	PHO4	P07270	312 aa	Known RBP	4.79	□□□□□ -1.64
ACF4	YJR083C	MSH3	P25336	1018 aa		4.79	□□□□□ -1.64
ACF4	YJR083C	ASF1	P32447	279 aa		4.79	□□□□□ -1.64
ACF4	YJR083C	VPS35	P34110	944 aa		4.79	□□□□□ -1.64
ACF4	YJR083C	TOD6	P34219	525 aa		4.79	□□□□□ -1.64
ACF4	YJR083C	ATG14	P38270	344 aa		4.79	□□□□□ -1.64
ACF4	YJR083C	XKS1	P42826	600 aa		4.79	□□□□□ -1.64
ACF4	YJR083C	POL32	P47110	350 aa		4.79	□□□□□ -1.64
ACF4	YJR083C	SNO2	P53823	222 aa		4.79	□□□□□ -1.64
ACF4	YJR083C	YPL277C	Q08989	487 aa		4.79	□□□□□ -1.64
ACF4	YJR083C	MGE1	P38523	228 aa		4.78	□□□□□ -1.64
ACF4	YJR083C	PEX13	P80667	386 aa		4.78	□□□□□ -1.64
ACF4	YJR083C	RPS13	P05756	151 aa	Known RBP	4.77	□□□□□ -1.65
ACF4	YJR083C	SRO9	P25567	434 aa	Known RBP	4.77	□□□□□ -1.65
ACF4	YJR083C	AIM26	P32858	118 aa		4.77	□□□□□ -1.65
ACF4	YJR083C	RPT1	P33299	467 aa	Known RBP	4.77	□□□□□ -1.65
ACF4	YJR083C	DAK2	P43550	591 aa		4.77	□□□□□ -1.65
ACF4	YJR083C	YNR063W	P53749	607 aa		4.77	□□□□□ -1.65
ACF4	YJR083C	VMA4	P22203	233 aa	Known RBP	4.76	□□□□□ -1.65
ACF4	YJR083C	RSM26	P47141	266 aa		4.76	□□□□□ -1.65
ACF4	YJR083C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
ACF4	YJR083C	KAR2	P16474	682 aa	Known RBP	4.75	□□□□□ -1.65
ACF4	YJR083C	PRP40	P33203	583 aa	Known RBP	4.75	□□□□□ -1.65
ACF4	YJR083C	YJL045W	P47052	634 aa		4.75	□□□□□ -1.65
ACF4	YJR083C	DAL4	Q04895	635 aa		4.75	□□□□□ -1.65
ACF4	YJR083C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	RIP-Chip
ACF4	YJR083C	SQT1	P35184	431 aa		4.74	□□□□□ -1.65
ACF4	YJR083C	QNS1	P38795	714 aa	Known RBP	4.74	□□□□□ -1.65
ACF4	YJR083C	GSF2	Q04697	403 aa	Known RBP	4.74	□□□□□ -1.65
ACF4	YJR083C	YLR358C	O13565	187 aa		4.73	□□□□□ -1.65
ACF4	YJR083C	YSC84	P32793	468 aa		4.73	□□□□□ -1.65
ACF4	YJR083C	UGA4	P32837	571 aa		4.73	□□□□□ -1.65
ACF4	YJR083C	VPS53	P47061	822 aa		4.73	□□□□□ -1.65
ACF4	YJR083C	ENV11	P53246	860 aa		4.73	□□□□□ -1.65
ACF4	YJR083C	ULP1	Q02724	621 aa		4.73	□□□□□ -1.65
ACF4	YJR083C	CLU1	Q03690	1277 aa	Known RBP	4.73	□□□□□ -1.65
ACF4	YJR083C	RKM2	Q03942	479 aa		4.73	□□□□□ -1.65
ACF4	YJR083C	RSC58	Q07979	502 aa		4.73	□□□□□ -1.65
ACF4	YJR083C	NBA1	Q08229	501 aa	Known RBP	4.73	□□□□□ -1.65
ACF4	YJR083C	SPS1	P08458	490 aa		4.72	□□□□□ -1.65
ACF4	YJR083C	PEX28	P38848	579 aa		4.72	□□□□□ -1.65
ACF4	YJR083C	YOR352W	Q08816	343 aa		4.72	□□□□□ -1.65
ACF4	YJR083C	ATE1	P16639	503 aa		4.71	□□□□□ -1.66
ACF4	YJR083C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
ACF4	YJR083C	ADD66	P36040	267 aa		4.71	□□□□□ -1.66
ACF4	YJR083C	ABZ1	P37254	787 aa	Predicted RBP	4.71	□□□□□ -1.66
ACF4	YJR083C	COQ4	O13525	335 aa		4.7	□□□□□ -1.66
ACF4	YJR083C	SHM2	P37291	469 aa	Known RBP	4.7	□□□□□ -1.66
ACF4	YJR083C	RDH54	P38086	958 aa		4.7	□□□□□ -1.66
ACF4	YJR083C	YGR122W	P53272	402 aa		4.7	□□□□□ -1.66
ACF4	YJR083C	YJR107W	P47145	328 aa		4.69	□□□□□ -1.66
ACF4	YJR083C	YGL140C	P53120	1219 aa		4.69	□□□□□ -1.66
ACF4	YJR083C	YDR132C	Q03900	495 aa		4.69	□□□□□ -1.66
ACF4	YJR083C	SGD1	Q06132	899 aa		4.69	□□□□□ -1.66
ACF4	YJR083C	RRP15	Q06511	250 aa	Predicted RBP	4.69	□□□□□ -1.66
ACF4	YJR083C	CTS1	P29029	562 aa		4.68	□□□□□ -1.66
ACF4	YJR083C	CCZ1	P38273	704 aa		4.68	□□□□□ -1.66
ACF4	YJR083C	LAM1	P38851	1228 aa		4.68	□□□□□ -1.66
ACF4	YJR083C	FAA3	P39002	694 aa		4.68	□□□□□ -1.66
ACF4	YJR083C	RPS26A	P39938	119 aa	Known RBP	4.68	□□□□□ -1.66
ACF4	YJR083C	RPS26B	P39939	119 aa	Known RBP	4.68	□□□□□ -1.66
ACF4	YJR083C	SPT20	P50875	604 aa		4.68	□□□□□ -1.66
ACF4	YJR083C	OYE2	Q03558	400 aa	Known RBP	4.68	□□□□□ -1.66
ACF4	YJR083C	MCD1	Q12158	566 aa		4.68	□□□□□ -1.66
ACF4	YJR083C	TUB2	P02557	457 aa	Known RBP	4.67	□□□□□ -1.66
ACF4	YJR083C	HXK1	P04806	485 aa	Known RBP	4.67	□□□□□ -1.66
ACF4	YJR083C	KIP1	P28742	1111 aa		4.67	□□□□□ -1.66
ACF4	YJR083C	SEC8	P32855	1065 aa		4.67	□□□□□ -1.66
ACF4	YJR083C	MEF2	P39677	819 aa		4.67	□□□□□ -1.66
ACF4	YJR083C	MRPS18	P42847	217 aa		4.67	□□□□□ -1.66
ACF4	YJR083C	HNT2	P49775	206 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms