RNA–Protein interactions for RNA: YJL210W

PEX2, Transcript of RING-finger peroxin and E3 ubiquitin ligase, yeast

Gene PEX2, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX2	YJL210W	NDT80	P38830	627 aa		11.18	□□□□□ -0.62
PEX2	YJL210W	TPM2	P40414	161 aa		11.18	□□□□□ -0.62
PEX2	YJL210W	YGL081W	P53156	320 aa		11.18	□□□□□ -0.62
PEX2	YJL210W	GIS4	Q04233	774 aa		11.18	□□□□□ -0.62
PEX2	YJL210W	TMA64	Q04600	565 aa	Known RBP	11.18	□□□□□ -0.62
PEX2	YJL210W	PAN5	P38787	379 aa		11.17	□□□□□ -0.62
PEX2	YJL210W	DJP1	P40564	432 aa		11.17	□□□□□ -0.62
PEX2	YJL210W	FMS1	P50264	508 aa		11.17	□□□□□ -0.62
PEX2	YJL210W	RET3	P53600	189 aa		11.17	□□□□□ -0.62
PEX2	YJL210W	FAR11	P53917	953 aa		11.17	□□□□□ -0.62
PEX2	YJL210W	JIP4	Q03361	876 aa		11.17	□□□□□ -0.62
PEX2	YJL210W	PEX19	Q07418	342 aa		11.17	□□□□□ -0.62
PEX2	YJL210W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.16	□□□□□ -0.62	not detected
PEX2	YJL210W	ERG7	P38604	731 aa		11.16	□□□□□ -0.62
PEX2	YJL210W	RSC30	P38781	883 aa		11.16	□□□□□ -0.62
PEX2	YJL210W	PIL1	P53252	339 aa	Known RBP	11.16	□□□□□ -0.62
PEX2	YJL210W	HAP5	Q02516	242 aa		11.16	□□□□□ -0.62
PEX2	YJL210W	SPH1	Q06160	661 aa		11.16	□□□□□ -0.62
PEX2	YJL210W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.16	□□□□□ -0.62	not detected
PEX2	YJL210W	TIF6	Q12522	245 aa	Known RBP	11.16	□□□□□ -0.62
PEX2	YJL210W	UGA4	P32837	571 aa		11.15	□□□□□ -0.62
PEX2	YJL210W	CIR1	P42940	261 aa		11.15	□□□□□ -0.62
PEX2	YJL210W	CSC1	Q06538	782 aa		11.15	□□□□□ -0.62
PEX2	YJL210W	SAM1	P10659	382 aa	Known RBP	11.14	□□□□□ -0.63
PEX2	YJL210W	VMA2	P16140	517 aa	Known RBP	11.14	□□□□□ -0.63
PEX2	YJL210W	CDC60	P26637	1090 aa	Known RBP	11.14	□□□□□ -0.63
PEX2	YJL210W	MSP1	P28737	362 aa		11.14	□□□□□ -0.63
PEX2	YJL210W	ELM1	P32801	640 aa		11.14	□□□□□ -0.63
PEX2	YJL210W	GPB2	P39717	880 aa		11.14	□□□□□ -0.63
PEX2	YJL210W	SPR3	P41901	512 aa		11.14	□□□□□ -0.63
PEX2	YJL210W	DUS1	P53759	423 aa	Known RBP	11.14	□□□□□ -0.63
PEX2	YJL210W	GUD1	Q07729	489 aa		11.14	□□□□□ -0.63
PEX2	YJL210W	PTC5	Q12511	572 aa		11.14	□□□□□ -0.63
PEX2	YJL210W	PKC1	P24583	1151 aa		11.13	□□□□□ -0.63
PEX2	YJL210W	UTR4	P32626	227 aa		11.13	□□□□□ -0.63
PEX2	YJL210W	YLR326W	Q06170	240 aa	Known RBP	11.13	□□□□□ -0.63
PEX2	YJL210W	SMD2	Q06217	110 aa	Known RBP	11.13	□□□□□ -0.63
PEX2	YJL210W	THR4	P16120	514 aa	Known RBP	11.12	□□□□□ -0.63
PEX2	YJL210W	PWP2	P25635	923 aa	Known RBP	11.12	□□□□□ -0.63
PEX2	YJL210W	URA1	P28272	314 aa	Predicted RBP	11.12	□□□□□ -0.63
PEX2	YJL210W	EUG1	P32474	517 aa		11.12	□□□□□ -0.63
PEX2	YJL210W	YKR018C	P36114	725 aa		11.12	□□□□□ -0.63
PEX2	YJL210W	RFT1	P38206	574 aa	Predicted RBP	11.12	□□□□□ -0.63
PEX2	YJL210W	SUL1	P38359	859 aa		11.12	□□□□□ -0.63
PEX2	YJL210W	STT3	P39007	718 aa	Known RBP	11.12	□□□□□ -0.63
PEX2	YJL210W	LIF1	P53150	421 aa		11.12	□□□□□ -0.63
PEX2	YJL210W	BNI5	P53890	448 aa	Known RBP	11.12	□□□□□ -0.63
PEX2	YJL210W	TIP41	Q12199	356 aa		11.12	□□□□□ -0.63
PEX2	YJL210W	SRF1	Q12516	437 aa		11.12	□□□□□ -0.63
PEX2	YJL210W	KEX1	P09620	729 aa		11.11	□□□□□ -0.63
PEX2	YJL210W	FRS2	P15625	503 aa	Known RBP	11.11	□□□□□ -0.63
PEX2	YJL210W	ALG1	P16661	449 aa		11.11	□□□□□ -0.63
PEX2	YJL210W	MCM3	P24279	971 aa	Known RBP	11.11	□□□□□ -0.63
PEX2	YJL210W	SRO9	P25567	434 aa	Known RBP	11.11	□□□□□ -0.63
PEX2	YJL210W	SAS3	P34218	831 aa		11.11	□□□□□ -0.63
PEX2	YJL210W	CIT3	P43635	486 aa		11.11	□□□□□ -0.63
PEX2	YJL210W	DUS3	Q06053	668 aa	Known RBP	11.11	□□□□□ -0.63
PEX2	YJL210W	TY3A-G	Q12173	290 aa		11.11	□□□□□ -0.63
PEX2	YJL210W	TY3A-I	Q99219	290 aa		11.11	□□□□□ -0.63
PEX2	YJL210W	HXK1	P04806	485 aa	Known RBP	11.1	□□□□□ -0.63
PEX2	YJL210W	SHP1	P34223	423 aa		11.1	□□□□□ -0.63
PEX2	YJL210W	MCR1	P36060	302 aa	Known RBP	11.1	□□□□□ -0.63
PEX2	YJL210W	DSE4	P53753	1117 aa		11.1	□□□□□ -0.63
PEX2	YJL210W	YAF9	P53930	226 aa		11.1	□□□□□ -0.63
PEX2	YJL210W	TRS120	Q04183	1289 aa		11.1	□□□□□ -0.63
PEX2	YJL210W	SLK19	Q08581	821 aa	Known RBP	11.1	□□□□□ -0.63
PEX2	YJL210W	YOR296W	Q08748	1289 aa		11.1	□□□□□ -0.63
PEX2	YJL210W	OXR1	Q08952	273 aa		11.1	□□□□□ -0.63
PEX2	YJL210W	NBL1	Q3E7Y6	73 aa		11.1	□□□□□ -0.63
PEX2	YJL210W	AIM44	Q99299	758 aa		11.1	□□□□□ -0.63
PEX2	YJL210W	CDC19	P00549	500 aa	Known RBP	11.09	□□□□□ -0.63
PEX2	YJL210W	RGP1	P16664	663 aa		11.09	□□□□□ -0.63
PEX2	YJL210W	CCT5	P40413	562 aa	Known RBP	11.09	□□□□□ -0.63
PEX2	YJL210W	ATG32	P40458	529 aa		11.09	□□□□□ -0.63
PEX2	YJL210W	YGR153W	P48238	217 aa		11.09	□□□□□ -0.63
PEX2	YJL210W	YGR125W	P53273	1036 aa		11.09	□□□□□ -0.63
PEX2	YJL210W	EIS1	Q05050	843 aa	Known RBP	11.09	□□□□□ -0.63
PEX2	YJL210W	YLR225C	Q05948	407 aa	Known RBP	11.09	□□□□□ -0.63
PEX2	YJL210W	WHI4	Q07655	649 aa	Known RBP	11.09	□□□□□ -0.63
PEX2	YJL210W	ARP6	Q12509	438 aa		11.09	□□□□□ -0.63
PEX2	YJL210W	VPS29	P38759	282 aa		11.08	□□□□□ -0.64
PEX2	YJL210W	GAA1	P39012	614 aa		11.08	□□□□□ -0.64
PEX2	YJL210W	CTR1	P49573	406 aa		11.08	□□□□□ -0.64
PEX2	YJL210W	CUE3	P53137	624 aa	Known RBP	11.08	□□□□□ -0.64
PEX2	YJL210W	YGR273C	P53329	174 aa		11.08	□□□□□ -0.64
PEX2	YJL210W	EAF7	P53911	425 aa	Known RBP	11.08	□□□□□ -0.64
PEX2	YJL210W	KRE33	P53914	1056 aa	Known RBP	11.08	□□□□□ -0.64
PEX2	YJL210W	ORC4	P54791	529 aa		11.08	□□□□□ -0.64
PEX2	YJL210W	PTA1	Q01329	785 aa	Predicted RBP	11.08	□□□□□ -0.64
PEX2	YJL210W	OYE2	Q03558	400 aa	Known RBP	11.08	□□□□□ -0.64
PEX2	YJL210W	AIM33	Q04516	312 aa		11.08	□□□□□ -0.64
PEX2	YJL210W	CSM3	Q04659	317 aa		11.08	□□□□□ -0.64
PEX2	YJL210W	ISA1	Q07821	250 aa	Predicted RBP	11.08	□□□□□ -0.64
PEX2	YJL210W	DDP1	Q99321	188 aa	Known RBP	11.08	□□□□□ -0.64
PEX2	YJL210W	ROX1	P25042	368 aa		11.07	□□□□□ -0.64
PEX2	YJL210W	MCM4	P30665	933 aa	Known RBP	11.07	□□□□□ -0.64
PEX2	YJL210W	RTC4	P53850	401 aa		11.07	□□□□□ -0.64
PEX2	YJL210W	DUS4	Q06063	367 aa		11.07	□□□□□ -0.64
PEX2	YJL210W	MMR1	Q06324	491 aa		11.07	□□□□□ -0.64
PEX2	YJL210W	ERP3	Q12403	225 aa		11.07	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms