RNA–Protein interactions for RNA: YJL113W

YJL113W, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YJL113W, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJL113WYJL113W CBC2Q08920 208 aaKnown RBP RIP-Chip data0.19□□□□□ -2.38not detected
YJL113WYJL113W SWI1P09547 1314 aa0.19□□□□□ -2.38
YJL113WYJL113W SPT20P50875 604 aa0.19□□□□□ -2.38
YJL113WYJL113W IMH1Q06704 911 aaKnown RBP0.19□□□□□ -2.38
YJL113WYJL113W MLF3P32047 452 aa0.18□□□□□ -2.38
YJL113WYJL113W PEA2P40091 420 aa0.18□□□□□ -2.38
YJL113WYJL113W RPN11P43588 306 aaKnown RBP0.18□□□□□ -2.38
YJL113WYJL113W CTR1P49573 406 aa0.18□□□□□ -2.38
YJL113WYJL113W KIP3P53086 805 aaKnown RBP0.18□□□□□ -2.38
YJL113WYJL113W FCP1Q03254 732 aa0.18□□□□□ -2.38
YJL113WYJL113W HDA3Q06623 655 aa0.18□□□□□ -2.38
YJL113WYJL113W PRO1P32264 428 aa0.18□□□□□ -2.38
YJL113WYJL113W MRT4P33201 236 aaKnown RBP0.18□□□□□ -2.38
YJL113WYJL113W NCL1P38205 684 aaKnown RBP0.18□□□□□ -2.38
YJL113WYJL113W PXL1P36166 706 aa0.18□□□□□ -2.38
YJL113WYJL113W TAF1P46677 1066 aa0.18□□□□□ -2.38
YJL113WYJL113W UBA2P52488 636 aa0.18□□□□□ -2.38
YJL113WYJL113W WHI4Q07655 649 aaKnown RBP0.18□□□□□ -2.38
YJL113WYJL113W ALG6Q12001 544 aaKnown RBP0.18□□□□□ -2.38
YJL113WYJL113W COBP00163 385 aa0.18□□□□□ -2.38
YJL113WYJL113W SSA2P10592 639 aaKnown RBP0.18□□□□□ -2.38
YJL113WYJL113W PRP2P20095 876 aaPredicted RBP0.18□□□□□ -2.38
YJL113WYJL113W SMY1P32364 656 aaKnown RBP0.18□□□□□ -2.38
YJL113WYJL113W AIM26P32858 118 aa0.18□□□□□ -2.38
YJL113WYJL113W APL2P36000 726 aaPredicted RBP0.18□□□□□ -2.38
YJL113WYJL113W RTR1P40084 226 aaPredicted RBP0.18□□□□□ -2.38
YJL113WYJL113W INP52P50942 1183 aa0.18□□□□□ -2.38
YJL113WYJL113W ERO1Q03103 563 aa0.18□□□□□ -2.38
YJL113WYJL113W ROT1Q03691 256 aa0.18□□□□□ -2.38
YJL113WYJL113W CSR2Q12734 1121 aa0.18□□□□□ -2.38
YJL113WYJL113W PHR1P05066 565 aaKnown RBP RIP-Chip data0.17□□□□□ -2.38not detected
YJL113WYJL113W LSB5P25369 354 aa0.17□□□□□ -2.38
YJL113WYJL113W SEA4P38164 1038 aa0.17□□□□□ -2.38
YJL113WYJL113W JJJ2P46997 583 aa0.17□□□□□ -2.38
YJL113WYJL113W UTP22P53254 1237 aaPredicted RBP0.17□□□□□ -2.38
YJL113WYJL113W NAR1P23503 491 aaKnown RBP0.17□□□□□ -2.38
YJL113WYJL113W GTF1P53260 183 aaPredicted RBP0.17□□□□□ -2.38
YJL113WYJL113W BRR2P32639 2163 aaKnown RBP0.17□□□□□ -2.38
YJL113WYJL113W YJL007CP47080 104 aa0.17□□□□□ -2.38
YJL113WYJL113W YGR117CP53270 476 aa0.17□□□□□ -2.38
YJL113WYJL113W IME1P21190 360 aa0.16□□□□□ -2.38
YJL113WYJL113W KIN82P25341 720 aa0.16□□□□□ -2.38
YJL113WYJL113W STU2P46675 888 aa0.16□□□□□ -2.38
YJL113WYJL113W SKG3Q06315 1026 aa0.16□□□□□ -2.38
YJL113WYJL113W RET1P22276 1149 aaKnown RBP0.16□□□□□ -2.38
YJL113WYJL113W HSP78P33416 811 aa0.16□□□□□ -2.38
YJL113WYJL113W PTC7P38797 343 aa0.16□□□□□ -2.38
YJL113WYJL113W KEL1P38853 1164 aaKnown RBP0.16□□□□□ -2.38
YJL113WYJL113W GIP2P40036 548 aa0.16□□□□□ -2.38
YJL113WYJL113W RTF1P53064 558 aa0.16□□□□□ -2.38
YJL113WYJL113W SEC23P15303 768 aaKnown RBP0.16□□□□□ -2.38
YJL113WYJL113W SHM1P37292 490 aaPredicted RBP0.16□□□□□ -2.38
YJL113WYJL113W MSC7P38694 644 aa0.16□□□□□ -2.38
YJL113WYJL113W HAL5P38970 855 aaKnown RBP0.16□□□□□ -2.38
YJL113WYJL113W TIM50Q02776 476 aa0.16□□□□□ -2.38
YJL113WYJL113W TOS4Q06266 489 aa0.16□□□□□ -2.38
YJL113WYJL113W YPR196WQ06595 470 aa0.16□□□□□ -2.38
YJL113WYJL113W PRK1P40494 810 aa0.15□□□□□ -2.38
YJL113WYJL113W YMR321CQ04898 105 aa0.15□□□□□ -2.38
YJL113WYJL113W DAP1Q12091 152 aa0.15□□□□□ -2.38
YJL113WYJL113W DFG16Q99234 619 aa0.15□□□□□ -2.38
YJL113WYJL113W SRP54P20424 541 aaKnown RBP0.15□□□□□ -2.39
YJL113WYJL113W RFS1P38234 210 aaKnown RBP0.15□□□□□ -2.39
YJL113WYJL113W ECM2P38241 364 aaKnown RBP0.15□□□□□ -2.39
YJL113WYJL113W ATG32P40458 529 aa0.15□□□□□ -2.39
YJL113WYJL113W PPT1P53043 513 aa0.15□□□□□ -2.39
YJL113WYJL113W YNL165WP53891 406 aa0.15□□□□□ -2.39
YJL113WYJL113W EST1P17214 699 aaPredicted RBP0.15□□□□□ -2.39
YJL113WYJL113W MDM10P18409 493 aa0.15□□□□□ -2.39
YJL113WYJL113W SIT4P20604 311 aa0.15□□□□□ -2.39
YJL113WYJL113W SHM2P37291 469 aaKnown RBP0.15□□□□□ -2.39
YJL113WYJL113W TIF4631P39935 952 aaKnown RBP0.15□□□□□ -2.39
YJL113WYJL113W KAR5Q04746 504 aa0.15□□□□□ -2.39
YJL113WYJL113W NTH2P35172 780 aa0.15□□□□□ -2.39
YJL113WYJL113W TAP42Q04372 366 aa0.15□□□□□ -2.39
YJL113WYJL113W DED1P06634 604 aaKnown RBP0.14□□□□□ -2.39
YJL113WYJL113W PSE1P32337 1089 aaKnown RBP0.14□□□□□ -2.39
YJL113WYJL113W SPT8P38915 602 aa0.14□□□□□ -2.39
YJL113WYJL113W SSD1P24276 1250 aaKnown RBP RIP-Chip data0.14□□□□□ -2.39not detected
YJL113WYJL113W KTR1P27810 393 aaKnown RBP0.14□□□□□ -2.39
YJL113WYJL113W IOC3P43596 787 aa0.14□□□□□ -2.39
YJL113WYJL113W SUT1P53032 299 aaKnown RBP0.14□□□□□ -2.39
YJL113WYJL113W MRPS35P53292 345 aa0.14□□□□□ -2.39
YJL113WYJL113W YNR040WP53736 256 aa0.14□□□□□ -2.39
YJL113WYJL113W HRQ1Q05549 1077 aa0.14□□□□□ -2.39
YJL113WYJL113W PRI2P20457 528 aa0.14□□□□□ -2.39
YJL113WYJL113W SHC1P39000 512 aa0.14□□□□□ -2.39
YJL113WYJL113W CWC24P53769 259 aa0.14□□□□□ -2.39
YJL113WYJL113W SLG1P54867 378 aa0.14□□□□□ -2.39
YJL113WYJL113W SEC16P48415 2195 aaKnown RBP0.14□□□□□ -2.39
YJL113WYJL113W CAB1Q04430 367 aa0.14□□□□□ -2.39
YJL113WYJL113W AOS1Q06624 347 aa0.14□□□□□ -2.39
YJL113WYJL113W COX4P04037 155 aa0.13□□□□□ -2.39
YJL113WYJL113W OSM1P21375 501 aaKnown RBP0.13□□□□□ -2.39
YJL113WYJL113W RCM1P53972 490 aa0.13□□□□□ -2.39
YJL113WYJL113W GDE1Q02979 1223 aa0.13□□□□□ -2.39
YJL113WYJL113W MAK21Q12176 1025 aaKnown RBP0.13□□□□□ -2.39
YJL113WYJL113W RPL40AP0CH08 128 aaKnown RBP0.13□□□□□ -2.39
YJL113WYJL113W RPL40BP0CH09 128 aaKnown RBP0.13□□□□□ -2.39
YJL113WYJL113W STE6P12866 1290 aa0.13□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 140.3 ms