RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR043C	YIR043C	NEM1	P38757	446 aa		7.29	□□□□□ -1.24
YIR043C	YIR043C	IRR1	P40541	1150 aa		7.29	□□□□□ -1.24
YIR043C	YIR043C	FMP25	Q08023	583 aa		7.29	□□□□□ -1.24
YIR043C	YIR043C	YDR461C-A	Q2V2P7	80 aa		7.29	□□□□□ -1.24
YIR043C	YIR043C	GAL11	P19659	1081 aa		7.28	□□□□□ -1.24
YIR043C	YIR043C	HSP60	P19882	572 aa	Known RBP	7.28	□□□□□ -1.24
YIR043C	YIR043C	SYP1	P25623	870 aa	Known RBP	7.28	□□□□□ -1.24
YIR043C	YIR043C	ADD66	P36040	267 aa		7.28	□□□□□ -1.24
YIR043C	YIR043C	MNN1	P39106	762 aa		7.28	□□□□□ -1.24
YIR043C	YIR043C	CEM1	P39525	442 aa		7.28	□□□□□ -1.24
YIR043C	YIR043C	SOK2	P53438	785 aa	Predicted RBP	7.28	□□□□□ -1.24
YIR043C	YIR043C	UTP5	Q04177	643 aa	Known RBP	7.28	□□□□□ -1.24
YIR043C	YIR043C	YLR125W	Q12138	136 aa		7.28	□□□□□ -1.24
YIR043C	YIR043C	ARE1	P25628	610 aa		7.27	□□□□□ -1.25
YIR043C	YIR043C	RAT1	Q02792	1006 aa	Known RBP	7.27	□□□□□ -1.25
YIR043C	YIR043C	TIF35	Q04067	274 aa	Known RBP	7.27	□□□□□ -1.25
YIR043C	YIR043C	YIG1	Q08956	461 aa		7.27	□□□□□ -1.25
YIR043C	YIR043C	CIT1	P00890	479 aa		7.26	□□□□□ -1.25
YIR043C	YIR043C	SBP1	P10080	294 aa	Known RBP	7.26	□□□□□ -1.25
YIR043C	YIR043C	PBY1	P38254	753 aa		7.26	□□□□□ -1.25
YIR043C	YIR043C	LEM3	P42838	414 aa		7.26	□□□□□ -1.25
YIR043C	YIR043C	LYS5	P50113	272 aa		7.26	□□□□□ -1.25
YIR043C	YIR043C	YNR063W	P53749	607 aa		7.26	□□□□□ -1.25
YIR043C	YIR043C	SRC1	Q03707	834 aa		7.26	□□□□□ -1.25
YIR043C	YIR043C	YDR444W	Q04093	687 aa		7.26	□□□□□ -1.25
YIR043C	YIR043C	LCB5	Q06147	687 aa	Known RBP	7.26	□□□□□ -1.25
YIR043C	YIR043C	EAF1	Q06337	982 aa		7.26	□□□□□ -1.25
YIR043C	YIR043C	SYT1	Q06836	1226 aa		7.26	□□□□□ -1.25
YIR043C	YIR043C	ERR1	P0CX10	437 aa		7.25	□□□□□ -1.25
YIR043C	YIR043C	ERR2	P0CX11	437 aa		7.25	□□□□□ -1.25
YIR043C	YIR043C	MET22	P32179	357 aa		7.25	□□□□□ -1.25
YIR043C	YIR043C	THI4	P32318	326 aa		7.25	□□□□□ -1.25
YIR043C	YIR043C	MCM7	P38132	845 aa		7.25	□□□□□ -1.25
YIR043C	YIR043C	GGA2	P38817	585 aa	Known RBP	7.25	□□□□□ -1.25
YIR043C	YIR043C	ERP6	P53198	216 aa		7.25	□□□□□ -1.25
YIR043C	YIR043C	YGL176C	P46945	554 aa		7.24	□□□□□ -1.25
YIR043C	YIR043C	SPO71	Q03868	1245 aa		7.24	□□□□□ -1.25
YIR043C	YIR043C	AOS1	Q06624	347 aa		7.24	□□□□□ -1.25
YIR043C	YIR043C	RKM4	Q12504	494 aa		7.24	□□□□□ -1.25
YIR043C	YIR043C	CAN1	P04817	590 aa		7.23	□□□□□ -1.25
YIR043C	YIR043C	DBP5	P20449	482 aa	Known RBP	7.23	□□□□□ -1.25
YIR043C	YIR043C	TSR4	P25040	408 aa		7.23	□□□□□ -1.25
YIR043C	YIR043C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	7.23	□□□□□ -1.25	not detected
YIR043C	YIR043C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	7.23	□□□□□ -1.25	not detected
YIR043C	YIR043C	YKL107W	P34251	309 aa		7.23	□□□□□ -1.25
YIR043C	YIR043C	GIP2	P40036	548 aa		7.23	□□□□□ -1.25
YIR043C	YIR043C	YIR007W	P40566	764 aa		7.23	□□□□□ -1.25
YIR043C	YIR043C	HUL4	P40985	892 aa		7.23	□□□□□ -1.25
YIR043C	YIR043C	CNN1	P43618	361 aa		7.23	□□□□□ -1.25
YIR043C	YIR043C	PFD1	P46988	109 aa		7.23	□□□□□ -1.25
YIR043C	YIR043C	UBX5	Q06682	500 aa		7.23	□□□□□ -1.25
YIR043C	YIR043C	YGR161W-C	Q3E744	92 aa		7.23	□□□□□ -1.25
YIR043C	YIR043C	ARL1	P38116	183 aa	Known RBP	7.22	□□□□□ -1.25
YIR043C	YIR043C	REI1	P38344	393 aa	Predicted RBP	7.22	□□□□□ -1.25
YIR043C	YIR043C	PAN5	P38787	379 aa		7.22	□□□□□ -1.25
YIR043C	YIR043C	MBP1	P39678	833 aa		7.22	□□□□□ -1.25
YIR043C	YIR043C	ALR2	P43553	858 aa		7.22	□□□□□ -1.25
YIR043C	YIR043C	MEC3	Q02574	474 aa		7.22	□□□□□ -1.25
YIR043C	YIR043C	PRP9	P19736	530 aa	Known RBP	7.21	□□□□□ -1.26
YIR043C	YIR043C	SNF7	P39929	240 aa	Known RBP	7.21	□□□□□ -1.26
YIR043C	YIR043C	SPO74	P45819	413 aa		7.21	□□□□□ -1.26
YIR043C	YIR043C	UTP8	P53276	713 aa	Known RBP	7.21	□□□□□ -1.26
YIR043C	YIR043C	RKM2	Q03942	479 aa		7.21	□□□□□ -1.26
YIR043C	YIR043C	YMR074C	Q04773	145 aa		7.21	□□□□□ -1.26
YIR043C	YIR043C	YPL066W	Q12194	479 aa		7.21	□□□□□ -1.26
YIR043C	YIR043C	AFG2	P32794	780 aa		7.2	□□□□□ -1.26
YIR043C	YIR043C	TED1	P40533	473 aa		7.2	□□□□□ -1.26
YIR043C	YIR043C	YJR142W	P47173	342 aa		7.2	□□□□□ -1.26
YIR043C	YIR043C	GCV1	P48015	400 aa		7.2	□□□□□ -1.26
YIR043C	YIR043C	UTP14	Q04500	899 aa	Known RBP	7.2	□□□□□ -1.26
YIR043C	YIR043C	ALG3	P38179	458 aa		7.19	□□□□□ -1.26
YIR043C	YIR043C	ACO2	P39533	789 aa		7.19	□□□□□ -1.26
YIR043C	YIR043C	MSH4	P40965	878 aa	Predicted RBP	7.19	□□□□□ -1.26
YIR043C	YIR043C	CAF120	P53836	1060 aa		7.19	□□□□□ -1.26
YIR043C	YIR043C	ALG6	Q12001	544 aa	Known RBP	7.19	□□□□□ -1.26
YIR043C	YIR043C	PDC5	P16467	563 aa	Known RBP	7.18	□□□□□ -1.26
YIR043C	YIR043C	NAR1	P23503	491 aa	Known RBP	7.18	□□□□□ -1.26
YIR043C	YIR043C	HNT2	P49775	206 aa		7.18	□□□□□ -1.26
YIR043C	YIR043C	RTA1	P53047	317 aa		7.18	□□□□□ -1.26
YIR043C	YIR043C	TAF8	Q03750	510 aa		7.18	□□□□□ -1.26
YIR043C	YIR043C	GIS4	Q04233	774 aa		7.18	□□□□□ -1.26
YIR043C	YIR043C	AVO1	Q08236	1176 aa		7.18	□□□□□ -1.26
YIR043C	YIR043C	LAP2	Q10740	671 aa		7.18	□□□□□ -1.26
YIR043C	YIR043C	PTC5	Q12511	572 aa		7.18	□□□□□ -1.26
YIR043C	YIR043C	MLS1	P30952	554 aa		7.17	□□□□□ -1.26
YIR043C	YIR043C	YAR028W	P39548	234 aa		7.17	□□□□□ -1.26
YIR043C	YIR043C	POL5	P39985	1022 aa	Known RBP	7.17	□□□□□ -1.26
YIR043C	YIR043C	MPH1	P40562	993 aa		7.17	□□□□□ -1.26
YIR043C	YIR043C	YDL124W	Q07551	312 aa	Known RBP	7.17	□□□□□ -1.26
YIR043C	YIR043C	SLP1	Q12232	587 aa		7.17	□□□□□ -1.26
YIR043C	YIR043C	YLL054C	Q12244	843 aa		7.17	□□□□□ -1.26
YIR043C	YIR043C	SAC7	P17121	654 aa		7.16	□□□□□ -1.26
YIR043C	YIR043C	KNS1	P32350	737 aa	Predicted RBP	7.16	□□□□□ -1.26
YIR043C	YIR043C	ALG14	P38242	237 aa		7.16	□□□□□ -1.26
YIR043C	YIR043C	RGD1	P38339	666 aa		7.16	□□□□□ -1.26
YIR043C	YIR043C	ELG1	Q12050	791 aa		7.16	□□□□□ -1.26
YIR043C	YIR043C	GPM1	P00950	247 aa	Known RBP	7.15	□□□□□ -1.26
YIR043C	YIR043C	SRM1	P21827	482 aa		7.15	□□□□□ -1.26
YIR043C	YIR043C	PGM2	P37012	569 aa	Known RBP	7.15	□□□□□ -1.26
YIR043C	YIR043C	CCC2	P38995	1004 aa		7.15	□□□□□ -1.26

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