RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C NEM1P38757 446 aa7.29□□□□□ -1.24
YIR043CYIR043C IRR1P40541 1150 aa7.29□□□□□ -1.24
YIR043CYIR043C FMP25Q08023 583 aa7.29□□□□□ -1.24
YIR043CYIR043C YDR461C-AQ2V2P7 80 aa7.29□□□□□ -1.24
YIR043CYIR043C GAL11P19659 1081 aa7.28□□□□□ -1.24
YIR043CYIR043C HSP60P19882 572 aaKnown RBP7.28□□□□□ -1.24
YIR043CYIR043C SYP1P25623 870 aaKnown RBP7.28□□□□□ -1.24
YIR043CYIR043C ADD66P36040 267 aa7.28□□□□□ -1.24
YIR043CYIR043C MNN1P39106 762 aa7.28□□□□□ -1.24
YIR043CYIR043C CEM1P39525 442 aa7.28□□□□□ -1.24
YIR043CYIR043C SOK2P53438 785 aaPredicted RBP7.28□□□□□ -1.24
YIR043CYIR043C UTP5Q04177 643 aaKnown RBP7.28□□□□□ -1.24
YIR043CYIR043C YLR125WQ12138 136 aa7.28□□□□□ -1.24
YIR043CYIR043C ARE1P25628 610 aa7.27□□□□□ -1.25
YIR043CYIR043C RAT1Q02792 1006 aaKnown RBP7.27□□□□□ -1.25
YIR043CYIR043C TIF35Q04067 274 aaKnown RBP7.27□□□□□ -1.25
YIR043CYIR043C YIG1Q08956 461 aa7.27□□□□□ -1.25
YIR043CYIR043C CIT1P00890 479 aa7.26□□□□□ -1.25
YIR043CYIR043C SBP1P10080 294 aaKnown RBP7.26□□□□□ -1.25
YIR043CYIR043C PBY1P38254 753 aa7.26□□□□□ -1.25
YIR043CYIR043C LEM3P42838 414 aa7.26□□□□□ -1.25
YIR043CYIR043C LYS5P50113 272 aa7.26□□□□□ -1.25
YIR043CYIR043C YNR063WP53749 607 aa7.26□□□□□ -1.25
YIR043CYIR043C SRC1Q03707 834 aa7.26□□□□□ -1.25
YIR043CYIR043C YDR444WQ04093 687 aa7.26□□□□□ -1.25
YIR043CYIR043C LCB5Q06147 687 aaKnown RBP7.26□□□□□ -1.25
YIR043CYIR043C EAF1Q06337 982 aa7.26□□□□□ -1.25
YIR043CYIR043C SYT1Q06836 1226 aa7.26□□□□□ -1.25
YIR043CYIR043C ERR1P0CX10 437 aa7.25□□□□□ -1.25
YIR043CYIR043C ERR2P0CX11 437 aa7.25□□□□□ -1.25
YIR043CYIR043C MET22P32179 357 aa7.25□□□□□ -1.25
YIR043CYIR043C THI4P32318 326 aa7.25□□□□□ -1.25
YIR043CYIR043C MCM7P38132 845 aa7.25□□□□□ -1.25
YIR043CYIR043C GGA2P38817 585 aaKnown RBP7.25□□□□□ -1.25
YIR043CYIR043C ERP6P53198 216 aa7.25□□□□□ -1.25
YIR043CYIR043C YGL176CP46945 554 aa7.24□□□□□ -1.25
YIR043CYIR043C SPO71Q03868 1245 aa7.24□□□□□ -1.25
YIR043CYIR043C AOS1Q06624 347 aa7.24□□□□□ -1.25
YIR043CYIR043C RKM4Q12504 494 aa7.24□□□□□ -1.25
YIR043CYIR043C CAN1P04817 590 aa7.23□□□□□ -1.25
YIR043CYIR043C DBP5P20449 482 aaKnown RBP7.23□□□□□ -1.25
YIR043CYIR043C TSR4P25040 408 aa7.23□□□□□ -1.25
YIR043CYIR043C PUF4P25339 888 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
YIR043CYIR043C PIN4P34217 668 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
YIR043CYIR043C YKL107WP34251 309 aa7.23□□□□□ -1.25
YIR043CYIR043C GIP2P40036 548 aa7.23□□□□□ -1.25
YIR043CYIR043C YIR007WP40566 764 aa7.23□□□□□ -1.25
YIR043CYIR043C HUL4P40985 892 aa7.23□□□□□ -1.25
YIR043CYIR043C CNN1P43618 361 aa7.23□□□□□ -1.25
YIR043CYIR043C PFD1P46988 109 aa7.23□□□□□ -1.25
YIR043CYIR043C UBX5Q06682 500 aa7.23□□□□□ -1.25
YIR043CYIR043C YGR161W-CQ3E744 92 aa7.23□□□□□ -1.25
YIR043CYIR043C ARL1P38116 183 aaKnown RBP7.22□□□□□ -1.25
YIR043CYIR043C REI1P38344 393 aaPredicted RBP7.22□□□□□ -1.25
YIR043CYIR043C PAN5P38787 379 aa7.22□□□□□ -1.25
YIR043CYIR043C MBP1P39678 833 aa7.22□□□□□ -1.25
YIR043CYIR043C ALR2P43553 858 aa7.22□□□□□ -1.25
YIR043CYIR043C MEC3Q02574 474 aa7.22□□□□□ -1.25
YIR043CYIR043C PRP9P19736 530 aaKnown RBP7.21□□□□□ -1.26
YIR043CYIR043C SNF7P39929 240 aaKnown RBP7.21□□□□□ -1.26
YIR043CYIR043C SPO74P45819 413 aa7.21□□□□□ -1.26
YIR043CYIR043C UTP8P53276 713 aaKnown RBP7.21□□□□□ -1.26
YIR043CYIR043C RKM2Q03942 479 aa7.21□□□□□ -1.26
YIR043CYIR043C YMR074CQ04773 145 aa7.21□□□□□ -1.26
YIR043CYIR043C YPL066WQ12194 479 aa7.21□□□□□ -1.26
YIR043CYIR043C AFG2P32794 780 aa7.2□□□□□ -1.26
YIR043CYIR043C TED1P40533 473 aa7.2□□□□□ -1.26
YIR043CYIR043C YJR142WP47173 342 aa7.2□□□□□ -1.26
YIR043CYIR043C GCV1P48015 400 aa7.2□□□□□ -1.26
YIR043CYIR043C UTP14Q04500 899 aaKnown RBP7.2□□□□□ -1.26
YIR043CYIR043C ALG3P38179 458 aa7.19□□□□□ -1.26
YIR043CYIR043C ACO2P39533 789 aa7.19□□□□□ -1.26
YIR043CYIR043C MSH4P40965 878 aaPredicted RBP7.19□□□□□ -1.26
YIR043CYIR043C CAF120P53836 1060 aa7.19□□□□□ -1.26
YIR043CYIR043C ALG6Q12001 544 aaKnown RBP7.19□□□□□ -1.26
YIR043CYIR043C PDC5P16467 563 aaKnown RBP7.18□□□□□ -1.26
YIR043CYIR043C NAR1P23503 491 aaKnown RBP7.18□□□□□ -1.26
YIR043CYIR043C HNT2P49775 206 aa7.18□□□□□ -1.26
YIR043CYIR043C RTA1P53047 317 aa7.18□□□□□ -1.26
YIR043CYIR043C TAF8Q03750 510 aa7.18□□□□□ -1.26
YIR043CYIR043C GIS4Q04233 774 aa7.18□□□□□ -1.26
YIR043CYIR043C AVO1Q08236 1176 aa7.18□□□□□ -1.26
YIR043CYIR043C LAP2Q10740 671 aa7.18□□□□□ -1.26
YIR043CYIR043C PTC5Q12511 572 aa7.18□□□□□ -1.26
YIR043CYIR043C MLS1P30952 554 aa7.17□□□□□ -1.26
YIR043CYIR043C YAR028WP39548 234 aa7.17□□□□□ -1.26
YIR043CYIR043C POL5P39985 1022 aaKnown RBP7.17□□□□□ -1.26
YIR043CYIR043C MPH1P40562 993 aa7.17□□□□□ -1.26
YIR043CYIR043C YDL124WQ07551 312 aaKnown RBP7.17□□□□□ -1.26
YIR043CYIR043C SLP1Q12232 587 aa7.17□□□□□ -1.26
YIR043CYIR043C YLL054CQ12244 843 aa7.17□□□□□ -1.26
YIR043CYIR043C SAC7P17121 654 aa7.16□□□□□ -1.26
YIR043CYIR043C KNS1P32350 737 aaPredicted RBP7.16□□□□□ -1.26
YIR043CYIR043C ALG14P38242 237 aa7.16□□□□□ -1.26
YIR043CYIR043C RGD1P38339 666 aa7.16□□□□□ -1.26
YIR043CYIR043C ELG1Q12050 791 aa7.16□□□□□ -1.26
YIR043CYIR043C GPM1P00950 247 aaKnown RBP7.15□□□□□ -1.26
YIR043CYIR043C SRM1P21827 482 aa7.15□□□□□ -1.26
YIR043CYIR043C PGM2P37012 569 aaKnown RBP7.15□□□□□ -1.26
YIR043CYIR043C CCC2P38995 1004 aa7.15□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms