RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA10YHR039C-A RPS4AP0CX35 261 aaKnown RBP4.54□□□□□ -1.68
VMA10YHR039C-A RPS4BP0CX36 261 aaKnown RBP4.54□□□□□ -1.68
VMA10YHR039C-A CHS2P14180 963 aa4.54□□□□□ -1.68
VMA10YHR039C-A ADD66P36040 267 aa4.54□□□□□ -1.68
VMA10YHR039C-A KAE1P36132 386 aa4.54□□□□□ -1.68
VMA10YHR039C-A VPS16Q03308 798 aa4.54□□□□□ -1.68
VMA10YHR039C-A YTA7P40340 1379 aa4.53□□□□□ -1.68
VMA10YHR039C-A TAF13P11747 167 aa4.53□□□□□ -1.68
VMA10YHR039C-A NNK1P36003 928 aa4.53□□□□□ -1.68
VMA10YHR039C-A ATG14P38270 344 aa4.53□□□□□ -1.68
VMA10YHR039C-A NNF1P47149 201 aa4.53□□□□□ -1.68
VMA10YHR039C-A GNP1P48813 663 aa4.53□□□□□ -1.68
VMA10YHR039C-A MRL1Q06815 381 aa4.53□□□□□ -1.68
VMA10YHR039C-A PIN2Q12057 282 aa4.53□□□□□ -1.68
VMA10YHR039C-A DED1P06634 604 aaKnown RBP4.52□□□□□ -1.69
VMA10YHR039C-A SBP1P10080 294 aaKnown RBP4.52□□□□□ -1.69
VMA10YHR039C-A NFS1P25374 497 aa4.52□□□□□ -1.69
VMA10YHR039C-A AFG2P32794 780 aa4.52□□□□□ -1.69
VMA10YHR039C-A SMY2P32909 740 aaKnown RBP4.52□□□□□ -1.69
VMA10YHR039C-A PET112P33893 541 aa4.52□□□□□ -1.69
VMA10YHR039C-A ALT1P52893 592 aa4.52□□□□□ -1.69
VMA10YHR039C-A YGR130CP53278 816 aa4.52□□□□□ -1.69
VMA10YHR039C-A EAR1Q03212 550 aa4.52□□□□□ -1.69
VMA10YHR039C-A RKM2Q03942 479 aa4.52□□□□□ -1.69
VMA10YHR039C-A LAP2Q10740 671 aa4.52□□□□□ -1.69
VMA10YHR039C-A TRP3P00937 484 aa4.51□□□□□ -1.69
VMA10YHR039C-A CLN2P20438 545 aa4.51□□□□□ -1.69
VMA10YHR039C-A MSB1P21339 1137 aaKnown RBP4.51□□□□□ -1.69
VMA10YHR039C-A RET1P22276 1149 aaKnown RBP4.51□□□□□ -1.69
VMA10YHR039C-A WHI3P34761 661 aaKnown RBP4.51□□□□□ -1.69
VMA10YHR039C-A MNR2P35724 969 aa4.51□□□□□ -1.69
VMA10YHR039C-A HXT13P39924 564 aa4.51□□□□□ -1.69
VMA10YHR039C-A MAD1P40957 749 aa4.51□□□□□ -1.69
VMA10YHR039C-A MMM1P41800 426 aa4.51□□□□□ -1.69
VMA10YHR039C-A HXT17P53631 564 aa4.51□□□□□ -1.69
VMA10YHR039C-A SIW14P53965 281 aa4.51□□□□□ -1.69
VMA10YHR039C-A ALD6P54115 500 aaKnown RBP4.51□□□□□ -1.69
VMA10YHR039C-A HXT15P54854 567 aa4.51□□□□□ -1.69
VMA10YHR039C-A ROD1Q02805 837 aa4.51□□□□□ -1.69
VMA10YHR039C-A DUT1P33317 147 aa4.5□□□□□ -1.69
VMA10YHR039C-A HSE1P38753 452 aa4.5□□□□□ -1.69
VMA10YHR039C-A VAC8P39968 578 aa4.5□□□□□ -1.69
VMA10YHR039C-A CIT3P43635 486 aa4.5□□□□□ -1.69
VMA10YHR039C-A ALO1P54783 526 aaKnown RBP4.5□□□□□ -1.69
VMA10YHR039C-A RSA3Q05942 220 aaKnown RBP4.5□□□□□ -1.69
VMA10YHR039C-A YLR257WQ06146 321 aaKnown RBP4.5□□□□□ -1.69
VMA10YHR039C-A RTT10Q08924 1013 aa4.5□□□□□ -1.69
VMA10YHR039C-A CDC34P14682 295 aa4.49□□□□□ -1.69
VMA10YHR039C-A MKK2P32491 506 aa4.49□□□□□ -1.69
VMA10YHR039C-A YKR073CP36153 106 aa4.49□□□□□ -1.69
VMA10YHR039C-A QNS1P38795 714 aaKnown RBP4.49□□□□□ -1.69
VMA10YHR039C-A NMD3P38861 518 aaKnown RBP4.49□□□□□ -1.69
VMA10YHR039C-A ENT3P47160 408 aa4.49□□□□□ -1.69
VMA10YHR039C-A RCM1P53972 490 aa4.49□□□□□ -1.69
VMA10YHR039C-A RAT1Q02792 1006 aaKnown RBP4.49□□□□□ -1.69
VMA10YHR039C-A MED7Q08278 222 aa4.49□□□□□ -1.69
VMA10YHR039C-A PUS7Q08647 676 aaKnown RBP4.49□□□□□ -1.69
VMA10YHR039C-A CYC7P00045 113 aa4.48□□□□□ -1.69
VMA10YHR039C-A RAD27P26793 382 aa4.48□□□□□ -1.69
VMA10YHR039C-A RER2P35196 286 aa4.48□□□□□ -1.69
VMA10YHR039C-A ALG3P38179 458 aa4.48□□□□□ -1.69
VMA10YHR039C-A VPS53P47061 822 aa4.48□□□□□ -1.69
VMA10YHR039C-A TPP1Q03796 238 aa4.48□□□□□ -1.69
VMA10YHR039C-A YOR059CQ08448 450 aaKnown RBP4.48□□□□□ -1.69
VMA10YHR039C-A TMA46Q12000 345 aaKnown RBP4.48□□□□□ -1.69
VMA10YHR039C-A YVC1Q12324 675 aa4.48□□□□□ -1.69
VMA10YHR039C-A PTC5Q12511 572 aa4.48□□□□□ -1.69
VMA10YHR039C-A SYP1P25623 870 aaKnown RBP4.47□□□□□ -1.69
VMA10YHR039C-A OYE3P41816 400 aaPredicted RBP4.47□□□□□ -1.69
VMA10YHR039C-A GCD1P09032 578 aaPredicted RBP4.46□□□□□ -1.7
VMA10YHR039C-A TOS1P38288 455 aa4.46□□□□□ -1.7
VMA10YHR039C-A YJL045WP47052 634 aa4.46□□□□□ -1.7
VMA10YHR039C-A EEB1Q02891 456 aa4.46□□□□□ -1.7
VMA10YHR039C-A SSF2Q12153 453 aaPredicted RBP4.46□□□□□ -1.7
VMA10YHR039C-A YOL098CQ12496 1037 aa4.46□□□□□ -1.7
VMA10YHR039C-A KIP1P28742 1111 aa4.45□□□□□ -1.7
VMA10YHR039C-A OMA1P36163 345 aa4.45□□□□□ -1.7
VMA10YHR039C-A PEX7P39108 375 aa4.45□□□□□ -1.7
VMA10YHR039C-A CNN1P43618 361 aa4.45□□□□□ -1.7
VMA10YHR039C-A INP52P50942 1183 aa4.45□□□□□ -1.7
VMA10YHR039C-A FPR4Q06205 392 aaPredicted RBP4.45□□□□□ -1.7
VMA10YHR039C-A HRK1Q08732 759 aaKnown RBP4.45□□□□□ -1.7
VMA10YHR039C-A DBP5P20449 482 aaKnown RBP4.44□□□□□ -1.7
VMA10YHR039C-A PUB1P32588 453 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7 RIP-Chip
VMA10YHR039C-A FAA4P47912 694 aaKnown RBP4.44□□□□□ -1.7
VMA10YHR039C-A CTH1P47976 325 aa4.44□□□□□ -1.7
VMA10YHR039C-A YGR053CP53234 283 aa4.44□□□□□ -1.7
VMA10YHR039C-A CWC24P53769 259 aa4.44□□□□□ -1.7
VMA10YHR039C-A NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
VMA10YHR039C-A TRE1Q08919 783 aa4.44□□□□□ -1.7
VMA10YHR039C-A WRS1Q12109 432 aaKnown RBP4.44□□□□□ -1.7
VMA10YHR039C-A NSI1Q12457 570 aa4.44□□□□□ -1.7
VMA10YHR039C-A SAM35P14693 329 aa4.43□□□□□ -1.7
VMA10YHR039C-A MLS1P30952 554 aa4.43□□□□□ -1.7
VMA10YHR039C-A YSC84P32793 468 aa4.43□□□□□ -1.7
VMA10YHR039C-A SEA4P38164 1038 aa4.43□□□□□ -1.7
VMA10YHR039C-A GPB2P39717 880 aa4.43□□□□□ -1.7
VMA10YHR039C-A IOC3P43596 787 aa4.43□□□□□ -1.7
VMA10YHR039C-A YJL049WP47048 450 aa4.43□□□□□ -1.7
VMA10YHR039C-A SDH1Q00711 640 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms