RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W KRE33P53914 1056 aaKnown RBP12.84□□□□□ -0.35
SNF6YHL025W YLR225CQ05948 407 aaKnown RBP12.84□□□□□ -0.35
SNF6YHL025W DDP1Q99321 188 aaKnown RBP12.84□□□□□ -0.35
SNF6YHL025W SAM2P19358 384 aaKnown RBP12.83□□□□□ -0.36
SNF6YHL025W RPN12P32496 274 aa12.83□□□□□ -0.36
SNF6YHL025W SPR3P41901 512 aa12.83□□□□□ -0.36
SNF6YHL025W PEX29Q03370 554 aa12.83□□□□□ -0.36
SNF6YHL025W HXK1P04806 485 aaKnown RBP12.82□□□□□ -0.36
SNF6YHL025W ERG12P07277 443 aa12.82□□□□□ -0.36
SNF6YHL025W MAK11P20484 414 aaKnown RBP12.82□□□□□ -0.36
SNF6YHL025W CCT3P39077 534 aaKnown RBP12.82□□□□□ -0.36
SNF6YHL025W ACA1P39970 489 aa12.82□□□□□ -0.36
SNF6YHL025W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.82□□□□□ -0.36not detected
SNF6YHL025W STI1P15705 589 aaKnown RBP RIP-Chip data12.81□□□□□ -0.36not detected
SNF6YHL025W LSB1P53281 241 aa12.81□□□□□ -0.36
SNF6YHL025W SOL4P53315 255 aa12.81□□□□□ -0.36
SNF6YHL025W SUB2Q07478 446 aaKnown RBP12.81□□□□□ -0.36
SNF6YHL025W NBL1Q3E7Y6 73 aa12.81□□□□□ -0.36
SNF6YHL025W RGP1P16664 663 aa12.8□□□□□ -0.36
SNF6YHL025W SPT21P35209 758 aa12.8□□□□□ -0.36
SNF6YHL025W TPM2P40414 161 aa12.8□□□□□ -0.36
SNF6YHL025W GIS4Q04233 774 aa12.8□□□□□ -0.36
SNF6YHL025W CSC1Q06538 782 aa12.8□□□□□ -0.36
SNF6YHL025W TIP41Q12199 356 aa12.8□□□□□ -0.36
SNF6YHL025W VPS13Q07878 3144 aa12.79□□□□□ -0.36
SNF6YHL025W KNS1P32350 737 aaPredicted RBP12.79□□□□□ -0.36
SNF6YHL025W DID4P36108 232 aa12.79□□□□□ -0.36
SNF6YHL025W VIP1Q06685 1146 aaKnown RBP12.79□□□□□ -0.36
SNF6YHL025W RPL8AP17076 256 aaKnown RBP12.78□□□□□ -0.36
SNF6YHL025W MCM3P24279 971 aaKnown RBP12.78□□□□□ -0.36
SNF6YHL025W URA1P28272 314 aaPredicted RBP12.78□□□□□ -0.36
SNF6YHL025W SAS3P34218 831 aa12.78□□□□□ -0.36
SNF6YHL025W YPT11P48559 417 aa12.78□□□□□ -0.36
SNF6YHL025W RET3P53600 189 aa12.78□□□□□ -0.36
SNF6YHL025W KRS1P15180 591 aaKnown RBP12.77□□□□□ -0.37
SNF6YHL025W YKT6P36015 200 aaKnown RBP12.77□□□□□ -0.37
SNF6YHL025W ASE1P50275 885 aa12.77□□□□□ -0.37
SNF6YHL025W CUE3P53137 624 aaKnown RBP12.77□□□□□ -0.37
SNF6YHL025W RTC4P53850 401 aa12.77□□□□□ -0.37
SNF6YHL025W YOR296WQ08748 1289 aa12.77□□□□□ -0.37
SNF6YHL025W MYO1P08964 1928 aa12.77□□□□□ -0.37
SNF6YHL025W RPL22AP05749 121 aaKnown RBP12.76□□□□□ -0.37
SNF6YHL025W THR4P16120 514 aaKnown RBP12.76□□□□□ -0.37
SNF6YHL025W ALG1P16661 449 aa12.76□□□□□ -0.37
SNF6YHL025W UTP4Q06679 776 aaKnown RBP12.76□□□□□ -0.37
SNF6YHL025W PTC5Q12511 572 aa12.76□□□□□ -0.37
SNF6YHL025W OCT1P35999 772 aa12.75□□□□□ -0.37
SNF6YHL025W RKM3P38222 552 aa12.75□□□□□ -0.37
SNF6YHL025W NET1P47035 1189 aa12.75□□□□□ -0.37
SNF6YHL025W BNI5P53890 448 aaKnown RBP12.75□□□□□ -0.37
SNF6YHL025W EIS1Q05050 843 aaKnown RBP12.75□□□□□ -0.37
SNF6YHL025W SMD2Q06217 110 aaKnown RBP12.75□□□□□ -0.37
SNF6YHL025W SUE1Q06524 206 aa12.75□□□□□ -0.37
SNF6YHL025W GPA1P08539 472 aa12.74□□□□□ -0.37
SNF6YHL025W PWP2P25635 923 aaKnown RBP12.74□□□□□ -0.37
SNF6YHL025W MCM4P30665 933 aaKnown RBP12.74□□□□□ -0.37
SNF6YHL025W ERG7P38604 731 aa12.74□□□□□ -0.37
SNF6YHL025W NPR3P38742 1146 aa12.74□□□□□ -0.37
SNF6YHL025W YER130CP39959 443 aa12.74□□□□□ -0.37
SNF6YHL025W PER1P25625 357 aa12.73□□□□□ -0.37
SNF6YHL025W STT3P39007 718 aaKnown RBP12.73□□□□□ -0.37
SNF6YHL025W LYS14P40971 790 aa12.73□□□□□ -0.37
SNF6YHL025W RSC1P53236 928 aa12.73□□□□□ -0.37
SNF6YHL025W YML037CQ03703 340 aa12.73□□□□□ -0.37
SNF6YHL025W TRS120Q04183 1289 aa12.73□□□□□ -0.37
SNF6YHL025W LCD1Q04377 747 aa12.73□□□□□ -0.37
SNF6YHL025W MMR1Q06324 491 aa12.73□□□□□ -0.37
SNF6YHL025W TRS33Q99394 268 aa12.73□□□□□ -0.37
SNF6YHL025W SRO9P25567 434 aaKnown RBP12.72□□□□□ -0.37
SNF6YHL025W BMH1P29311 267 aaKnown RBP12.72□□□□□ -0.37
SNF6YHL025W PAH1P32567 862 aa12.72□□□□□ -0.37
SNF6YHL025W IXR1P33417 597 aa12.72□□□□□ -0.37
SNF6YHL025W DSE4P53753 1117 aa12.72□□□□□ -0.37
SNF6YHL025W CSM3Q04659 317 aa12.72□□□□□ -0.37
SNF6YHL025W SLK19Q08581 821 aaKnown RBP12.72□□□□□ -0.37
SNF6YHL025W RAD18P10862 487 aa12.71□□□□□ -0.37
SNF6YHL025W TAF13P11747 167 aa12.71□□□□□ -0.37
SNF6YHL025W PHO88P38264 188 aaPredicted RBP12.71□□□□□ -0.37
SNF6YHL025W PAN5P38787 379 aa12.71□□□□□ -0.37
SNF6YHL025W VAB2P40003 282 aa12.71□□□□□ -0.37
SNF6YHL025W DAK2P43550 591 aa12.71□□□□□ -0.37
SNF6YHL025W FMS1P50264 508 aa12.71□□□□□ -0.37
SNF6YHL025W ULP1Q02724 621 aa12.71□□□□□ -0.37
SNF6YHL025W FBP1P09201 348 aa12.7□□□□□ -0.38
SNF6YHL025W YKR023WP36119 530 aaKnown RBP12.7□□□□□ -0.38
SNF6YHL025W PSF2P40359 213 aa12.7□□□□□ -0.38
SNF6YHL025W HIS4P00815 799 aaKnown RBP12.69□□□□□ -0.38
SNF6YHL025W RRM3P38766 723 aa12.69□□□□□ -0.38
SNF6YHL025W CIT3P43635 486 aa12.69□□□□□ -0.38
SNF6YHL025W YJL007CP47080 104 aa12.69□□□□□ -0.38
SNF6YHL025W YGR153WP48238 217 aa12.69□□□□□ -0.38
SNF6YHL025W YPR148CQ06523 435 aa12.69□□□□□ -0.38
SNF6YHL025W YDJ1P25491 409 aaKnown RBP12.68□□□□□ -0.38
SNF6YHL025W VMS1Q04311 632 aaKnown RBP12.68□□□□□ -0.38
SNF6YHL025W TAO3P40468 2376 aa12.67□□□□□ -0.38
SNF6YHL025W SUL1P38359 859 aa12.67□□□□□ -0.38
SNF6YHL025W ATG32P40458 529 aa12.67□□□□□ -0.38
SNF6YHL025W SDA1P53313 767 aaKnown RBP12.67□□□□□ -0.38
SNF6YHL025W ALD6P54115 500 aaKnown RBP12.67□□□□□ -0.38
SNF6YHL025W UBX5Q06682 500 aa12.67□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms