RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA7, Length 357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA7YGR020C LAP2Q10740 671 aa5.97□□□□□ -1.45
VMA7YGR020C SMY2P32909 740 aaKnown RBP5.96□□□□□ -1.46
VMA7YGR020C HSE1P38753 452 aa5.96□□□□□ -1.46
VMA7YGR020C ALO1P54783 526 aaKnown RBP5.96□□□□□ -1.46
VMA7YGR020C TRP3P00937 484 aa5.95□□□□□ -1.46
VMA7YGR020C WHI3P34761 661 aaKnown RBP5.95□□□□□ -1.46
VMA7YGR020C CIT3P43635 486 aa5.95□□□□□ -1.46
VMA7YGR020C ALT1P52893 592 aa5.95□□□□□ -1.46
VMA7YGR020C NRD1P53617 575 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
VMA7YGR020C RKM2Q03942 479 aa5.95□□□□□ -1.46
VMA7YGR020C HDA2Q06629 674 aa5.95□□□□□ -1.46
VMA7YGR020C MED7Q08278 222 aa5.95□□□□□ -1.46
VMA7YGR020C DED1P06634 604 aaKnown RBP5.94□□□□□ -1.46
VMA7YGR020C GCR1P07261 785 aa5.94□□□□□ -1.46
VMA7YGR020C MRL1Q06815 381 aa5.94□□□□□ -1.46
VMA7YGR020C CYC7P00045 113 aa5.93□□□□□ -1.46
VMA7YGR020C RET1P22276 1149 aaKnown RBP5.93□□□□□ -1.46
VMA7YGR020C YKR073CP36153 106 aa5.93□□□□□ -1.46
VMA7YGR020C SNU71P53207 620 aaKnown RBP5.93□□□□□ -1.46
VMA7YGR020C EAR1Q03212 550 aa5.93□□□□□ -1.46
VMA7YGR020C YOR059CQ08448 450 aaKnown RBP5.93□□□□□ -1.46
VMA7YGR020C OMA1P36163 345 aa5.92□□□□□ -1.46
VMA7YGR020C SIW14P53965 281 aa5.92□□□□□ -1.46
VMA7YGR020C RCM1P53972 490 aa5.92□□□□□ -1.46
VMA7YGR020C RSA3Q05942 220 aaKnown RBP5.92□□□□□ -1.46
VMA7YGR020C YLR257WQ06146 321 aaKnown RBP5.92□□□□□ -1.46
VMA7YGR020C NSI1Q12457 570 aa5.92□□□□□ -1.46
VMA7YGR020C PET112P33893 541 aa5.91□□□□□ -1.46
VMA7YGR020C TOS1P38288 455 aa5.91□□□□□ -1.46
VMA7YGR020C QNS1P38795 714 aaKnown RBP5.91□□□□□ -1.46
VMA7YGR020C VPS53P47061 822 aa5.91□□□□□ -1.46
VMA7YGR020C ENT3P47160 408 aa5.91□□□□□ -1.46
VMA7YGR020C GNP1P48813 663 aa5.91□□□□□ -1.46
VMA7YGR020C ROD1Q02805 837 aa5.91□□□□□ -1.46
VMA7YGR020C TPP1Q03796 238 aa5.91□□□□□ -1.46
VMA7YGR020C PUS7Q08647 676 aaKnown RBP5.91□□□□□ -1.46
VMA7YGR020C RAD27P26793 382 aa5.9□□□□□ -1.46
VMA7YGR020C AFG2P32794 780 aa5.9□□□□□ -1.46
VMA7YGR020C MAC1P35192 417 aa5.9□□□□□ -1.46
VMA7YGR020C NMD3P38861 518 aaKnown RBP5.9□□□□□ -1.46
VMA7YGR020C RTT10Q08924 1013 aa5.9□□□□□ -1.46
VMA7YGR020C YVC1Q12324 675 aa5.9□□□□□ -1.46
VMA7YGR020C HXT13P39924 564 aa5.89□□□□□ -1.47
VMA7YGR020C INP52P50942 1183 aa5.89□□□□□ -1.47
VMA7YGR020C HXT17P53631 564 aa5.89□□□□□ -1.47
VMA7YGR020C HXT15P54854 567 aa5.89□□□□□ -1.47
VMA7YGR020C SVF1Q05515 481 aa5.89□□□□□ -1.47
VMA7YGR020C HRK1Q08732 759 aaKnown RBP5.89□□□□□ -1.47
VMA7YGR020C GCD1P09032 578 aaPredicted RBP5.88□□□□□ -1.47
VMA7YGR020C MKK2P32491 506 aa5.88□□□□□ -1.47
VMA7YGR020C MNR2P35724 969 aa5.88□□□□□ -1.47
VMA7YGR020C ALG3P38179 458 aa5.88□□□□□ -1.47
VMA7YGR020C OYE3P41816 400 aaPredicted RBP5.88□□□□□ -1.47
VMA7YGR020C RAT1Q02792 1006 aaKnown RBP5.88□□□□□ -1.47
VMA7YGR020C PTC5Q12511 572 aa5.88□□□□□ -1.47
VMA7YGR020C NAP1P25293 417 aaKnown RBP5.87□□□□□ -1.47
VMA7YGR020C PUB1P32588 453 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47 RIP-Chip
VMA7YGR020C TMA46Q12000 345 aaKnown RBP5.87□□□□□ -1.47
VMA7YGR020C LIP5P32875 414 aa5.86□□□□□ -1.47
VMA7YGR020C YJL045WP47052 634 aa5.86□□□□□ -1.47
VMA7YGR020C MAG2Q06436 670 aaKnown RBP5.86□□□□□ -1.47
VMA7YGR020C BRE4Q07660 1125 aa5.86□□□□□ -1.47
VMA7YGR020C TRE1Q08919 783 aa5.86□□□□□ -1.47
VMA7YGR020C CDC34P14682 295 aa5.85□□□□□ -1.47
VMA7YGR020C SYP1P25623 870 aaKnown RBP5.85□□□□□ -1.47
VMA7YGR020C KIP1P28742 1111 aa5.85□□□□□ -1.47
VMA7YGR020C DUT1P33317 147 aa5.85□□□□□ -1.47
VMA7YGR020C PEX7P39108 375 aa5.85□□□□□ -1.47
VMA7YGR020C CTH1P47976 325 aa5.85□□□□□ -1.47
VMA7YGR020C SDH1Q00711 640 aa5.85□□□□□ -1.47
VMA7YGR020C JIP5Q06214 492 aaPredicted RBP5.85□□□□□ -1.47
VMA7YGR020C RER2P35196 286 aa5.84□□□□□ -1.47
VMA7YGR020C MAD1P40957 749 aa5.84□□□□□ -1.47
VMA7YGR020C CNN1P43618 361 aa5.84□□□□□ -1.47
VMA7YGR020C CLN2P20438 545 aa5.83□□□□□ -1.48
VMA7YGR020C YHL012WP38709 493 aa5.83□□□□□ -1.48
VMA7YGR020C YPL260WQ08977 551 aa5.83□□□□□ -1.48
VMA7YGR020C DBP5P20449 482 aaKnown RBP5.82□□□□□ -1.48
VMA7YGR020C ADP1P25371 1049 aa5.82□□□□□ -1.48
VMA7YGR020C PRO1P32264 428 aa5.82□□□□□ -1.48
VMA7YGR020C YSC84P32793 468 aa5.82□□□□□ -1.48
VMA7YGR020C PAM1P37304 830 aaKnown RBP5.82□□□□□ -1.48
VMA7YGR020C RGD1P38339 666 aa5.82□□□□□ -1.48
VMA7YGR020C MET10P39692 1035 aa5.82□□□□□ -1.48
VMA7YGR020C GPB2P39717 880 aa5.82□□□□□ -1.48
VMA7YGR020C SSY1Q03770 852 aa5.82□□□□□ -1.48
VMA7YGR020C GLT1Q12680 2145 aaKnown RBP5.82□□□□□ -1.48
VMA7YGR020C SAM35P14693 329 aa5.81□□□□□ -1.48
VMA7YGR020C MDL2P33311 773 aa5.81□□□□□ -1.48
VMA7YGR020C PTC7P38797 343 aa5.81□□□□□ -1.48
VMA7YGR020C EEB1Q02891 456 aa5.81□□□□□ -1.48
VMA7YGR020C VPS16Q03308 798 aa5.81□□□□□ -1.48
VMA7YGR020C PIN2Q12057 282 aa5.81□□□□□ -1.48
VMA7YGR020C SPO21Q12411 609 aa5.81□□□□□ -1.48
VMA7YGR020C MLS1P30952 554 aa5.8□□□□□ -1.48
VMA7YGR020C SEA4P38164 1038 aa5.8□□□□□ -1.48
VMA7YGR020C GTS1P40956 396 aa5.8□□□□□ -1.48
VMA7YGR020C CWC24P53769 259 aa5.8□□□□□ -1.48
VMA7YGR020C HOS3Q02959 697 aaKnown RBP5.8□□□□□ -1.48
VMA7YGR020C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms