RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C RIM11P38615 370 aa5.33□□□□□ -1.56
SEC9YGR009C ERC1P38767 581 aa5.33□□□□□ -1.56
SEC9YGR009C ILV3P39522 585 aaKnown RBP5.33□□□□□ -1.56
SEC9YGR009C ESL1P40456 1118 aa5.33□□□□□ -1.56
SEC9YGR009C AGX1P43567 385 aa5.33□□□□□ -1.56
SEC9YGR009C DCP2P53550 970 aaKnown RBP5.33□□□□□ -1.56
SEC9YGR009C YNL144CP53907 740 aa5.33□□□□□ -1.56
SEC9YGR009C YLR326WQ06170 240 aaKnown RBP5.33□□□□□ -1.56
SEC9YGR009C SPN1Q06505 410 aaPredicted RBP5.33□□□□□ -1.56
SEC9YGR009C ESC8Q08119 714 aa5.33□□□□□ -1.56
SEC9YGR009C ERG12P07277 443 aa5.32□□□□□ -1.56
SEC9YGR009C RPC40P07703 335 aaKnown RBP5.32□□□□□ -1.56
SEC9YGR009C SRO9P25567 434 aaKnown RBP5.32□□□□□ -1.56
SEC9YGR009C PAP1P29468 568 aaKnown RBP5.32□□□□□ -1.56
SEC9YGR009C NTG1P31378 399 aa5.32□□□□□ -1.56
SEC9YGR009C SFA1P32771 386 aa5.32□□□□□ -1.56
SEC9YGR009C TEF4P36008 412 aaKnown RBP5.32□□□□□ -1.56
SEC9YGR009C MRPL40P36534 297 aa5.32□□□□□ -1.56
SEC9YGR009C YHR131CP38835 850 aa5.32□□□□□ -1.56
SEC9YGR009C CRP1P38845 465 aaKnown RBP5.32□□□□□ -1.56
SEC9YGR009C HAL5P38970 855 aaKnown RBP5.32□□□□□ -1.56
SEC9YGR009C YIL166CP40445 542 aa5.32□□□□□ -1.56
SEC9YGR009C BNA1P47096 177 aa5.32□□□□□ -1.56
SEC9YGR009C TRF5P48561 642 aaKnown RBP5.32□□□□□ -1.56
SEC9YGR009C PEX14P53112 341 aa5.32□□□□□ -1.56
SEC9YGR009C FUS2Q05670 677 aa5.32□□□□□ -1.56
SEC9YGR009C TAF3Q12297 353 aa5.32□□□□□ -1.56
SEC9YGR009C YOL087CQ99247 1116 aa5.32□□□□□ -1.56
SEC9YGR009C GFD2P25370 566 aaKnown RBP5.31□□□□□ -1.56
SEC9YGR009C RSC6P25632 483 aa5.31□□□□□ -1.56
SEC9YGR009C MSH2P25847 964 aa5.31□□□□□ -1.56
SEC9YGR009C HSP104P31539 908 aaKnown RBP5.31□□□□□ -1.56
SEC9YGR009C KRE6P32486 720 aa5.31□□□□□ -1.56
SEC9YGR009C RIB7P33312 244 aa5.31□□□□□ -1.56
SEC9YGR009C SPT8P38915 602 aa5.31□□□□□ -1.56
SEC9YGR009C SMC2P38989 1170 aaKnown RBP5.31□□□□□ -1.56
SEC9YGR009C EMP47P43555 445 aa5.31□□□□□ -1.56
SEC9YGR009C IML2P47031 731 aa5.31□□□□□ -1.56
SEC9YGR009C NCS2P53923 493 aaPredicted RBP5.31□□□□□ -1.56
SEC9YGR009C SEC5P89102 971 aa5.31□□□□□ -1.56
SEC9YGR009C ECM11Q04110 302 aa5.31□□□□□ -1.56
SEC9YGR009C YML083CQ04526 418 aa5.31□□□□□ -1.56
SEC9YGR009C BRX1Q08235 291 aaKnown RBP5.31□□□□□ -1.56
SEC9YGR009C LAP2Q10740 671 aa5.31□□□□□ -1.56
SEC9YGR009C REC8Q12188 680 aa5.31□□□□□ -1.56
SEC9YGR009C OSH2Q12451 1283 aa5.31□□□□□ -1.56
SEC9YGR009C TMA7Q3E764 64 aaKnown RBP5.31□□□□□ -1.56
SEC9YGR009C TFB1P32776 642 aa5.31□□□□□ -1.56
SEC9YGR009C MNR2P35724 969 aa5.31□□□□□ -1.56
SEC9YGR009C ECM4P36156 370 aa5.31□□□□□ -1.56
SEC9YGR009C PIH1P38768 344 aa5.31□□□□□ -1.56
SEC9YGR009C ECM1P39715 212 aa5.31□□□□□ -1.56
SEC9YGR009C TOK1P40310 691 aa5.31□□□□□ -1.56
SEC9YGR009C NDC80P40460 691 aa5.31□□□□□ -1.56
SEC9YGR009C FOL2P51601 243 aaKnown RBP5.31□□□□□ -1.56
SEC9YGR009C FPK1P53739 893 aa5.31□□□□□ -1.56
SEC9YGR009C SND1Q04007 877 aa5.31□□□□□ -1.56
SEC9YGR009C GAD1Q04792 585 aa5.31□□□□□ -1.56
SEC9YGR009C CIR2Q08822 631 aa5.31□□□□□ -1.56
SEC9YGR009C YBL113CQ7M4S9 792 aa5.31□□□□□ -1.56
SEC9YGR009C RAD3P06839 778 aa5.3□□□□□ -1.56
SEC9YGR009C HIR1P32479 840 aa5.3□□□□□ -1.56
SEC9YGR009C CNS1P33313 385 aa5.3□□□□□ -1.56
SEC9YGR009C SET3P36124 751 aa5.3□□□□□ -1.56
SEC9YGR009C MTW1P39731 289 aa5.3□□□□□ -1.56
SEC9YGR009C RIM21P48565 533 aa5.3□□□□□ -1.56
SEC9YGR009C IST1P53843 298 aaPredicted RBP5.3□□□□□ -1.56
SEC9YGR009C ALD6P54115 500 aaKnown RBP5.3□□□□□ -1.56
SEC9YGR009C FDC1Q03034 503 aa5.3□□□□□ -1.56
SEC9YGR009C YDR090CQ03193 310 aa5.3□□□□□ -1.56
SEC9YGR009C YOR238WQ08634 303 aa5.3□□□□□ -1.56
SEC9YGR009C RTC5Q12108 567 aaKnown RBP5.3□□□□□ -1.56
SEC9YGR009C NYV1Q12255 253 aa5.3□□□□□ -1.56
SEC9YGR009C TEF1P02994 458 aaKnown RBP5.29□□□□□ -1.56
SEC9YGR009C KSS1P14681 368 aa5.29□□□□□ -1.56
SEC9YGR009C PMA2P19657 947 aa5.29□□□□□ -1.56
SEC9YGR009C PUP1P25043 261 aa5.29□□□□□ -1.56
SEC9YGR009C MCM2P29469 868 aa5.29□□□□□ -1.56
SEC9YGR009C ASF2P32448 525 aaPredicted RBP5.29□□□□□ -1.56
SEC9YGR009C SLA1P32790 1244 aa5.29□□□□□ -1.56
SEC9YGR009C UIP5P36137 443 aa5.29□□□□□ -1.56
SEC9YGR009C YSW1P38280 609 aa5.29□□□□□ -1.56
SEC9YGR009C PCL7P40186 285 aa5.29□□□□□ -1.56
SEC9YGR009C HUL4P40985 892 aa5.29□□□□□ -1.56
SEC9YGR009C NUP84P52891 726 aa5.29□□□□□ -1.56
SEC9YGR009C UBX4P54730 416 aa5.29□□□□□ -1.56
SEC9YGR009C NSE5Q03718 556 aa5.29□□□□□ -1.56
SEC9YGR009C ARP9Q05123 467 aa5.29□□□□□ -1.56
SEC9YGR009C CRN1Q06440 651 aa5.29□□□□□ -1.56
SEC9YGR009C PEX19Q07418 342 aa5.29□□□□□ -1.56
SEC9YGR009C CDC53Q12018 815 aaKnown RBP5.29□□□□□ -1.56
SEC9YGR009C MED1Q12321 566 aa5.29□□□□□ -1.56
SEC9YGR009C JIP3O13555 125 aa5.29□□□□□ -1.56
SEC9YGR009C MST1P07236 462 aa5.29□□□□□ -1.56
SEC9YGR009C HEM1P09950 548 aaPredicted RBP5.29□□□□□ -1.56
SEC9YGR009C PGI1P12709 554 aaKnown RBP5.29□□□□□ -1.56
SEC9YGR009C OCA4P25366 362 aa5.29□□□□□ -1.56
SEC9YGR009C IMP2'P32351 346 aa5.29□□□□□ -1.56
SEC9YGR009C PLC1P32383 869 aa5.29□□□□□ -1.56
SEC9YGR009C BMH2P34730 273 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms