RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C SCJ1P25303 377 aa3.71□□□□□ -1.82
XRN1YGL173C EBP2P36049 427 aaKnown RBP3.71□□□□□ -1.82
XRN1YGL173C SSP120P39931 234 aaKnown RBP3.71□□□□□ -1.82
XRN1YGL173C TBF1Q02457 562 aa3.71□□□□□ -1.82
XRN1YGL173C CDC53Q12018 815 aaKnown RBP3.71□□□□□ -1.82
XRN1YGL173C SBP1P10080 294 aaKnown RBP3.71□□□□□ -1.82
XRN1YGL173C RAD53P22216 821 aa3.71□□□□□ -1.82
XRN1YGL173C PRP45P28004 379 aaPredicted RBP3.71□□□□□ -1.82
XRN1YGL173C PRP40P33203 583 aaKnown RBP3.71□□□□□ -1.82
XRN1YGL173C FUI1P38196 639 aa3.71□□□□□ -1.82
XRN1YGL173C CRP1P38845 465 aaKnown RBP3.71□□□□□ -1.82
XRN1YGL173C RGD2P43556 714 aa3.71□□□□□ -1.82
XRN1YGL173C MSN5P52918 1224 aa3.71□□□□□ -1.82
XRN1YGL173C APC1P53886 1748 aa3.71□□□□□ -1.82
XRN1YGL173C QCR6P00127 147 aa3.71□□□□□ -1.82
XRN1YGL173C TPM1P17536 199 aaKnown RBP3.71□□□□□ -1.82
XRN1YGL173C NTH2P35172 780 aa3.71□□□□□ -1.82
XRN1YGL173C GEM1P39722 662 aa3.71□□□□□ -1.82
XRN1YGL173C YML6P51998 286 aa3.71□□□□□ -1.82
XRN1YGL173C KXD1P53158 218 aa3.71□□□□□ -1.82
XRN1YGL173C TUB4P53378 473 aa3.71□□□□□ -1.82
XRN1YGL173C COG6P53959 839 aa3.71□□□□□ -1.82
XRN1YGL173C JIP5Q06214 492 aaPredicted RBP3.71□□□□□ -1.82
XRN1YGL173C YOR296WQ08748 1289 aa3.71□□□□□ -1.82
XRN1YGL173C RPN12P32496 274 aa3.7□□□□□ -1.82
XRN1YGL173C LEM3P42838 414 aa3.7□□□□□ -1.82
XRN1YGL173C NUT1P53114 1132 aa3.7□□□□□ -1.82
XRN1YGL173C HIF1Q12373 385 aa3.7□□□□□ -1.82
XRN1YGL173C FBP26P32604 452 aa3.7□□□□□ -1.82
XRN1YGL173C YJR115WP47152 169 aa3.7□□□□□ -1.82
XRN1YGL173C KIP3P53086 805 aaKnown RBP3.7□□□□□ -1.82
XRN1YGL173C SDH5Q08230 162 aa3.7□□□□□ -1.82
XRN1YGL173C BIK1P11709 440 aa3.7□□□□□ -1.82
XRN1YGL173C PGI1P12709 554 aaKnown RBP3.7□□□□□ -1.82
XRN1YGL173C DID4P36108 232 aa3.7□□□□□ -1.82
XRN1YGL173C THI12P42883 340 aa3.7□□□□□ -1.82
XRN1YGL173C THI5P43534 340 aa3.7□□□□□ -1.82
XRN1YGL173C THI11P47183 340 aa3.7□□□□□ -1.82
XRN1YGL173C PIP2P52960 996 aa3.7□□□□□ -1.82
XRN1YGL173C HUL5P53119 910 aa3.7□□□□□ -1.82
XRN1YGL173C SPC19Q03954 165 aa3.7□□□□□ -1.82
XRN1YGL173C HDA3Q06623 655 aa3.7□□□□□ -1.82
XRN1YGL173C GIC2Q06648 383 aa3.7□□□□□ -1.82
XRN1YGL173C THI13Q07748 340 aa3.7□□□□□ -1.82
XRN1YGL173C SWI5P08153 709 aa3.7□□□□□ -1.82
XRN1YGL173C MEF1P25039 761 aa3.7□□□□□ -1.82
XRN1YGL173C SRB8P25648 1427 aa3.7□□□□□ -1.82
XRN1YGL173C NUD1P32336 851 aa3.7□□□□□ -1.82
XRN1YGL173C HAL5P38970 855 aaKnown RBP3.7□□□□□ -1.82
XRN1YGL173C GUS1P46655 708 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
XRN1YGL173C NIT2P47016 307 aa3.7□□□□□ -1.82
XRN1YGL173C EIS1Q05050 843 aaKnown RBP3.7□□□□□ -1.82
XRN1YGL173C MLC2Q06580 163 aa3.7□□□□□ -1.82
XRN1YGL173C CDC73Q06697 393 aa3.7□□□□□ -1.82
XRN1YGL173C CAN1P04817 590 aa3.69□□□□□ -1.82
XRN1YGL173C KRR1P25586 316 aaPredicted RBP3.69□□□□□ -1.82
XRN1YGL173C LYP1P32487 611 aa3.69□□□□□ -1.82
XRN1YGL173C XRS2P33301 854 aa3.69□□□□□ -1.82
XRN1YGL173C PIC2P40035 300 aa3.69□□□□□ -1.82
XRN1YGL173C SGM1P47166 707 aa3.69□□□□□ -1.82
XRN1YGL173C ARH1P48360 493 aa3.69□□□□□ -1.82
XRN1YGL173C CNM67P53865 581 aaKnown RBP3.69□□□□□ -1.82
XRN1YGL173C BUL2Q03758 920 aaKnown RBP3.69□□□□□ -1.82
XRN1YGL173C NTG2Q08214 380 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-DR4O74302 440 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-HP0C2I4 478 aaKnown RBP3.69□□□□□ -1.82
XRN1YGL173C TY1A-AP0CX57 440 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-PR1P0CX58 440 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-ORP0CX59 440 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-PR2P0CX60 440 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-DR5P0CX65 440 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-ER2P0CX66 440 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-GR3P0CX67 440 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-LR1P0CX68 440 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-MR2P0CX69 440 aa3.69□□□□□ -1.82
XRN1YGL173C PEX6P33760 1030 aa3.69□□□□□ -1.82
XRN1YGL173C ERP2P39704 215 aa3.69□□□□□ -1.82
XRN1YGL173C RSC8P43609 557 aaKnown RBP3.69□□□□□ -1.82
XRN1YGL173C TY1A-JR2P47099 440 aa3.69□□□□□ -1.82
XRN1YGL173C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
XRN1YGL173C TY1A-DR1Q03856 440 aa3.69□□□□□ -1.82
XRN1YGL173C MTC5Q03897 1148 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-ML1Q04706 440 aaKnown RBP3.69□□□□□ -1.82
XRN1YGL173C MPC54Q08550 464 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-BRQ12217 440 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-NL2Q12470 440 aa3.69□□□□□ -1.82
XRN1YGL173C TY1A-GR2Q12485 440 aa3.69□□□□□ -1.82
XRN1YGL173C RAD27P26793 382 aa3.69□□□□□ -1.82
XRN1YGL173C SSH4P32343 579 aa3.69□□□□□ -1.82
XRN1YGL173C KTR4P38131 464 aa3.69□□□□□ -1.82
XRN1YGL173C ATP25Q03153 612 aa3.69□□□□□ -1.82
XRN1YGL173C RPC82P32349 654 aa3.68□□□□□ -1.82
XRN1YGL173C RPN3P40016 523 aaKnown RBP3.68□□□□□ -1.82
XRN1YGL173C PSY2P40164 858 aa3.68□□□□□ -1.82
XRN1YGL173C SUM1P46676 1062 aa3.68□□□□□ -1.82
XRN1YGL173C PRY3P47033 881 aa3.68□□□□□ -1.82
XRN1YGL173C GPG1P53130 126 aa3.68□□□□□ -1.82
XRN1YGL173C YNL193WP53870 558 aa3.68□□□□□ -1.82
XRN1YGL173C CTR9P89105 1077 aa3.68□□□□□ -1.82
XRN1YGL173C TDA5Q06417 326 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms