RNA–Protein interactions for RNA: YER104W

RTT105, Transcript of Protein with a role in regulation of Ty1 transposition, yeast

Gene RTT105, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTT105	YER104W	MEC3	Q02574	474 aa		4.26	□□□□□ -1.73
RTT105	YER104W	SPC42	P36094	363 aa		4.25	□□□□□ -1.73
RTT105	YER104W	NMD2	P38798	1089 aa	Known RBP	4.25	□□□□□ -1.73
RTT105	YER104W	YNL011C	P53980	444 aa		4.25	□□□□□ -1.73
RTT105	YER104W	JIP5	Q06214	492 aa	Predicted RBP	4.25	□□□□□ -1.73
RTT105	YER104W	GPI13	Q07830	1017 aa		4.25	□□□□□ -1.73
RTT105	YER104W	HTS1	P07263	546 aa	Known RBP	4.24	□□□□□ -1.73
RTT105	YER104W	REI1	P38344	393 aa	Predicted RBP	4.24	□□□□□ -1.73
RTT105	YER104W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
RTT105	YER104W	YAF9	P53930	226 aa		4.24	□□□□□ -1.73
RTT105	YER104W	CTR9	P89105	1077 aa		4.24	□□□□□ -1.73
RTT105	YER104W	MNL2	Q12205	849 aa		4.24	□□□□□ -1.73
RTT105	YER104W	TRM2	P33753	639 aa		4.23	□□□□□ -1.73
RTT105	YER104W	YOL098C	Q12496	1037 aa		4.23	□□□□□ -1.73
RTT105	YER104W	PHO4	P07270	312 aa	Known RBP	4.22	□□□□□ -1.73
RTT105	YER104W	NPR1	P22211	790 aa		4.22	□□□□□ -1.73
RTT105	YER104W	SMY2	P32909	740 aa	Known RBP	4.22	□□□□□ -1.73
RTT105	YER104W	TAT2	P38967	592 aa		4.22	□□□□□ -1.73
RTT105	YER104W	FYV10	P40492	516 aa		4.22	□□□□□ -1.73
RTT105	YER104W	FOL2	P51601	243 aa	Known RBP	4.22	□□□□□ -1.73
RTT105	YER104W	CDC55	Q00362	526 aa		4.22	□□□□□ -1.73
RTT105	YER104W	RMD1	Q03441	430 aa		4.22	□□□□□ -1.73
RTT105	YER104W	BSC2	Q05611	235 aa		4.22	□□□□□ -1.73
RTT105	YER104W	RIM11	P38615	370 aa		4.21	□□□□□ -1.74
RTT105	YER104W	MSE1	P48525	536 aa		4.21	□□□□□ -1.74
RTT105	YER104W	YGR045C	P53229	120 aa		4.21	□□□□□ -1.74
RTT105	YER104W	UTP22	P53254	1237 aa	Predicted RBP	4.21	□□□□□ -1.74
RTT105	YER104W	ELA1	P53861	379 aa	Predicted RBP	4.21	□□□□□ -1.74
RTT105	YER104W	COB	P00163	385 aa		4.2	□□□□□ -1.74
RTT105	YER104W	GCD6	P32501	712 aa	Known RBP	4.2	□□□□□ -1.74
RTT105	YER104W	YJL049W	P47048	450 aa		4.2	□□□□□ -1.74
RTT105	YER104W	SLI1	P53304	468 aa		4.2	□□□□□ -1.74
RTT105	YER104W	CMR1	Q12510	522 aa	Known RBP	4.2	□□□□□ -1.74
RTT105	YER104W	PRP5	P21372	849 aa	Predicted RBP	4.19	□□□□□ -1.74
RTT105	YER104W	RPT1	P33299	467 aa	Known RBP	4.19	□□□□□ -1.74
RTT105	YER104W	NNK1	P36003	928 aa		4.19	□□□□□ -1.74
RTT105	YER104W	MAD1	P40957	749 aa		4.19	□□□□□ -1.74
RTT105	YER104W	SAM37	P50110	327 aa		4.19	□□□□□ -1.74
RTT105	YER104W	VPS16	Q03308	798 aa		4.19	□□□□□ -1.74
RTT105	YER104W	PIN2	Q12057	282 aa		4.19	□□□□□ -1.74
RTT105	YER104W	FLP1	P03870	423 aa		4.18	□□□□□ -1.74
RTT105	YER104W	CLN2	P20438	545 aa		4.18	□□□□□ -1.74
RTT105	YER104W	VPS35	P34110	944 aa		4.18	□□□□□ -1.74
RTT105	YER104W	VAC8	P39968	578 aa		4.18	□□□□□ -1.74
RTT105	YER104W	DAK2	P43550	591 aa		4.18	□□□□□ -1.74
RTT105	YER104W	OSW7	P43611	510 aa		4.18	□□□□□ -1.74
RTT105	YER104W	RNH70	P53331	553 aa		4.18	□□□□□ -1.74
RTT105	YER104W	ALD6	P54115	500 aa	Known RBP	4.18	□□□□□ -1.74
RTT105	YER104W	PMT7	Q06644	662 aa		4.18	□□□□□ -1.74
RTT105	YER104W	SRP40	P32583	406 aa	Predicted RBP	4.17	□□□□□ -1.74
RTT105	YER104W	DUR3	P33413	735 aa		4.17	□□□□□ -1.74
RTT105	YER104W	NUT1	P53114	1132 aa		4.17	□□□□□ -1.74
RTT105	YER104W	SPR28	Q04921	423 aa		4.17	□□□□□ -1.74
RTT105	YER104W	ESF1	Q06344	628 aa	Known RBP	4.17	□□□□□ -1.74
RTT105	YER104W	NOC3	Q07896	663 aa	Predicted RBP	4.17	□□□□□ -1.74
RTT105	YER104W	INP54	Q08227	384 aa	Known RBP	4.17	□□□□□ -1.74
RTT105	YER104W	PUS7	Q08647	676 aa	Known RBP	4.17	□□□□□ -1.74
RTT105	YER104W	TOP1	P04786	769 aa		4.16	□□□□□ -1.74
RTT105	YER104W	MCM2	P29469	868 aa		4.16	□□□□□ -1.74
RTT105	YER104W	MCM5	P29496	775 aa	Known RBP	4.16	□□□□□ -1.74
RTT105	YER104W	MNR2	P35724	969 aa		4.16	□□□□□ -1.74
RTT105	YER104W	CIC1	P38779	376 aa	Known RBP	4.16	□□□□□ -1.74
RTT105	YER104W	FPR3	P38911	411 aa	Known RBP	4.16	□□□□□ -1.74
RTT105	YER104W	RVS167	P39743	482 aa	Known RBP	4.16	□□□□□ -1.74
RTT105	YER104W	SAP155	P43612	1002 aa		4.16	□□□□□ -1.74
RTT105	YER104W	AVO1	Q08236	1176 aa		4.16	□□□□□ -1.74
RTT105	YER104W	OXR1	Q08952	273 aa		4.16	□□□□□ -1.74
RTT105	YER104W	YKL091C	P33324	310 aa	Known RBP	4.15	□□□□□ -1.75
RTT105	YER104W	RRP14	P36080	434 aa	Known RBP	4.15	□□□□□ -1.75
RTT105	YER104W	IOC3	P43596	787 aa		4.15	□□□□□ -1.75
RTT105	YER104W	YDR132C	Q03900	495 aa		4.15	□□□□□ -1.75
RTT105	YER104W	WRS1	Q12109	432 aa	Known RBP	4.15	□□□□□ -1.75
RTT105	YER104W	SSF2	Q12153	453 aa	Predicted RBP	4.15	□□□□□ -1.75
RTT105	YER104W	RAD53	P22216	821 aa		4.14	□□□□□ -1.75
RTT105	YER104W	PEP7	P32609	515 aa		4.14	□□□□□ -1.75
RTT105	YER104W	PPG1	P32838	368 aa		4.14	□□□□□ -1.75
RTT105	YER104W	YKL077W	P36081	392 aa		4.14	□□□□□ -1.75
RTT105	YER104W	SHU2	P38957	223 aa		4.14	□□□□□ -1.75
RTT105	YER104W	RPS26A	P39938	119 aa	Known RBP	4.14	□□□□□ -1.75
RTT105	YER104W	RPS26B	P39939	119 aa	Known RBP	4.14	□□□□□ -1.75
RTT105	YER104W	SNM1	P40993	198 aa		4.14	□□□□□ -1.75
RTT105	YER104W	YGR122W	P53272	402 aa		4.14	□□□□□ -1.75
RTT105	YER104W	TPP1	Q03796	238 aa		4.14	□□□□□ -1.75
RTT105	YER104W	NSE3	Q05541	303 aa		4.14	□□□□□ -1.75
RTT105	YER104W	CIT2	P08679	460 aa		4.13	□□□□□ -1.75
RTT105	YER104W	SAM35	P14693	329 aa		4.13	□□□□□ -1.75
RTT105	YER104W	CYC8	P14922	966 aa		4.13	□□□□□ -1.75
RTT105	YER104W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
RTT105	YER104W	ARL1	P38116	183 aa	Known RBP	4.13	□□□□□ -1.75
RTT105	YER104W	SPT20	P50875	604 aa		4.13	□□□□□ -1.75
RTT105	YER104W	MON1	P53129	644 aa		4.13	□□□□□ -1.75
RTT105	YER104W	ALG12	P53730	551 aa		4.13	□□□□□ -1.75
RTT105	YER104W	CTF4	Q01454	927 aa		4.13	□□□□□ -1.75
RTT105	YER104W	RPN4	Q03465	531 aa		4.13	□□□□□ -1.75
RTT105	YER104W	YCS4	Q06156	1176 aa		4.13	□□□□□ -1.75
RTT105	YER104W	TOS4	Q06266	489 aa		4.13	□□□□□ -1.75
RTT105	YER104W	PET112	P33893	541 aa		4.12	□□□□□ -1.75
RTT105	YER104W	SUN4	P53616	420 aa		4.12	□□□□□ -1.75
RTT105	YER104W	YOR352W	Q08816	343 aa		4.12	□□□□□ -1.75
RTT105	YER104W	HXK1	P04806	485 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms