RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C TIP41Q12199 356 aa8.85□□□□□ -0.99
PUP3YER094C PWP2P25635 923 aaKnown RBP8.84□□□□□ -0.99
PUP3YER094C RPN12P32496 274 aa8.84□□□□□ -0.99
PUP3YER094C YIL089WP40500 205 aa8.84□□□□□ -0.99
PUP3YER094C RRT6P53117 311 aaPredicted RBP8.84□□□□□ -0.99
PUP3YER094C SOL4P53315 255 aa8.84□□□□□ -0.99
PUP3YER094C BNI5P53890 448 aaKnown RBP8.84□□□□□ -0.99
PUP3YER094C OCT1P35999 772 aa8.83□□□□□ -1
PUP3YER094C LYS14P40971 790 aa8.83□□□□□ -1
PUP3YER094C ASE1P50275 885 aa8.83□□□□□ -1
PUP3YER094C YML037CQ03703 340 aa8.83□□□□□ -1
PUP3YER094C EIS1Q05050 843 aaKnown RBP8.83□□□□□ -1
PUP3YER094C YOR296WQ08748 1289 aa8.83□□□□□ -1
PUP3YER094C DDP1Q99321 188 aaKnown RBP8.83□□□□□ -1
PUP3YER094C THR4P16120 514 aaKnown RBP8.82□□□□□ -1
PUP3YER094C URA1P28272 314 aaPredicted RBP8.82□□□□□ -1
PUP3YER094C RFT1P38206 574 aaPredicted RBP8.82□□□□□ -1
PUP3YER094C YER130CP39959 443 aa8.82□□□□□ -1
PUP3YER094C RTC4P53850 401 aa8.82□□□□□ -1
PUP3YER094C TRS120Q04183 1289 aa8.82□□□□□ -1
PUP3YER094C YKT6P36015 200 aaKnown RBP8.81□□□□□ -1
PUP3YER094C PHO88P38264 188 aaPredicted RBP8.81□□□□□ -1
PUP3YER094C DSE4P53753 1117 aa8.81□□□□□ -1
PUP3YER094C VMS1Q04311 632 aaKnown RBP8.81□□□□□ -1
PUP3YER094C CSM3Q04659 317 aa8.81□□□□□ -1
PUP3YER094C PTC5Q12511 572 aa8.81□□□□□ -1
PUP3YER094C TRS33Q99394 268 aa8.81□□□□□ -1
PUP3YER094C FKS1P38631 1876 aaKnown RBP8.81□□□□□ -1
PUP3YER094C GPA1P08539 472 aa8.8□□□□□ -1
PUP3YER094C FBP1P09201 348 aa8.8□□□□□ -1
PUP3YER094C ALG1P16661 449 aa8.8□□□□□ -1
PUP3YER094C MCM4P30665 933 aaKnown RBP8.8□□□□□ -1
PUP3YER094C NPR3P38742 1146 aa8.8□□□□□ -1
PUP3YER094C NDT80P38830 627 aa8.8□□□□□ -1
PUP3YER094C STT3P39007 718 aaKnown RBP8.8□□□□□ -1
PUP3YER094C VAB2P40003 282 aa8.8□□□□□ -1
PUP3YER094C YPT11P48559 417 aa8.8□□□□□ -1
PUP3YER094C FMS1P50264 508 aa8.8□□□□□ -1
PUP3YER094C RET3P53600 189 aa8.8□□□□□ -1
PUP3YER094C KRE33P53914 1056 aaKnown RBP8.8□□□□□ -1
PUP3YER094C SGD1Q06132 899 aa8.8□□□□□ -1
PUP3YER094C MMR1Q06324 491 aa8.8□□□□□ -1
PUP3YER094C TYW1Q08960 810 aaKnown RBP8.8□□□□□ -1
PUP3YER094C TUF1P02992 437 aaKnown RBP8.79□□□□□ -1
PUP3YER094C RAD18P10862 487 aa8.79□□□□□ -1
PUP3YER094C KNS1P32350 737 aaPredicted RBP8.79□□□□□ -1
PUP3YER094C MCD4P36051 919 aa8.79□□□□□ -1
PUP3YER094C PCS60P38137 543 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
PUP3YER094C RKM3P38222 552 aa8.79□□□□□ -1
PUP3YER094C SUL1P38359 859 aa8.79□□□□□ -1
PUP3YER094C CIT3P43635 486 aa8.79□□□□□ -1
PUP3YER094C YJL007CP47080 104 aa8.79□□□□□ -1
PUP3YER094C CUE3P53137 624 aaKnown RBP8.79□□□□□ -1
PUP3YER094C RSC1P53236 928 aa8.79□□□□□ -1
PUP3YER094C SDA1P53313 767 aaKnown RBP8.79□□□□□ -1
PUP3YER094C SLK19Q08581 821 aaKnown RBP8.79□□□□□ -1
PUP3YER094C RKM4Q12504 494 aa8.79□□□□□ -1
PUP3YER094C HIS4P00815 799 aaKnown RBP8.78□□□□□ -1
PUP3YER094C GSY1P23337 708 aa8.78□□□□□ -1
PUP3YER094C MCM3P24279 971 aaKnown RBP8.78□□□□□ -1
PUP3YER094C YDJ1P25491 409 aaKnown RBP8.78□□□□□ -1
PUP3YER094C SRO9P25567 434 aaKnown RBP8.78□□□□□ -1
PUP3YER094C PER1P25625 357 aa8.78□□□□□ -1
PUP3YER094C PAN5P38787 379 aa8.78□□□□□ -1
PUP3YER094C YGR273CP53329 174 aa8.78□□□□□ -1
PUP3YER094C AIM33Q04516 312 aa8.78□□□□□ -1
PUP3YER094C YLH47Q06493 454 aa8.78□□□□□ -1
PUP3YER094C OXR1Q08952 273 aa8.78□□□□□ -1
PUP3YER094C SES1P07284 462 aaKnown RBP8.77□□□□□ -1.01
PUP3YER094C SAM1P10659 382 aaKnown RBP8.77□□□□□ -1.01
PUP3YER094C BMH1P29311 267 aaKnown RBP8.77□□□□□ -1.01
PUP3YER094C RRM3P38766 723 aa8.77□□□□□ -1.01
PUP3YER094C YGR153WP48238 217 aa8.77□□□□□ -1.01
PUP3YER094C LCD1Q04377 747 aa8.77□□□□□ -1.01
PUP3YER094C UBX5Q06682 500 aa8.77□□□□□ -1.01
PUP3YER094C PSR2Q07949 397 aa8.77□□□□□ -1.01
PUP3YER094C ILV1P00927 576 aaKnown RBP8.76□□□□□ -1.01
PUP3YER094C RPL22AP05749 121 aaKnown RBP8.76□□□□□ -1.01
PUP3YER094C CDC15P27636 974 aa8.76□□□□□ -1.01
PUP3YER094C SAC6P32599 642 aaKnown RBP8.76□□□□□ -1.01
PUP3YER094C YKR018CP36114 725 aa8.76□□□□□ -1.01
PUP3YER094C BSD2P38356 321 aa8.76□□□□□ -1.01
PUP3YER094C NET1P47035 1189 aa8.76□□□□□ -1.01
PUP3YER094C LIF1P53150 421 aa8.76□□□□□ -1.01
PUP3YER094C ALD6P54115 500 aaKnown RBP8.76□□□□□ -1.01
PUP3YER094C OYE2Q03558 400 aaKnown RBP8.76□□□□□ -1.01
PUP3YER094C TMA64Q04600 565 aaKnown RBP8.76□□□□□ -1.01
PUP3YER094C ORC6P38826 435 aa8.75□□□□□ -1.01
PUP3YER094C GAA1P39012 614 aa8.75□□□□□ -1.01
PUP3YER094C ATG32P40458 529 aa8.75□□□□□ -1.01
PUP3YER094C DAK2P43550 591 aa8.75□□□□□ -1.01
PUP3YER094C UBA2P52488 636 aa8.75□□□□□ -1.01
PUP3YER094C MFM1Q02783 413 aa8.75□□□□□ -1.01
PUP3YER094C JIP4Q03361 876 aa8.75□□□□□ -1.01
PUP3YER094C VMA2P16140 517 aaKnown RBP8.74□□□□□ -1.01
PUP3YER094C UGA4P32837 571 aa8.74□□□□□ -1.01
PUP3YER094C TGL1P34163 548 aa8.74□□□□□ -1.01
PUP3YER094C NOC2P39744 710 aaKnown RBP8.74□□□□□ -1.01
PUP3YER094C BUL2Q03758 920 aaKnown RBP8.74□□□□□ -1.01
PUP3YER094C RBA50Q04418 439 aa8.74□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms