RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C RAD18P10862 487 aa12.27□□□□□ -0.45
SPC25YER018C SAS3P34218 831 aa12.27□□□□□ -0.45
SPC25YER018C MCD4P36051 919 aa12.27□□□□□ -0.45
SPC25YER018C ARL1P38116 183 aaKnown RBP12.27□□□□□ -0.45
SPC25YER018C SNF7P39929 240 aaKnown RBP12.27□□□□□ -0.45
SPC25YER018C CCT5P40413 562 aaKnown RBP12.27□□□□□ -0.45
SPC25YER018C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.27□□□□□ -0.45not detected
SPC25YER018C FRS2P15625 503 aaKnown RBP12.26□□□□□ -0.45
SPC25YER018C PER1P25625 357 aa12.26□□□□□ -0.45
SPC25YER018C NDT80P38830 627 aa12.26□□□□□ -0.45
SPC25YER018C RSM25P40496 264 aa12.26□□□□□ -0.45
SPC25YER018C FMS1P50264 508 aa12.26□□□□□ -0.45
SPC25YER018C EIS1Q05050 843 aaKnown RBP12.26□□□□□ -0.45
SPC25YER018C TIP41Q12199 356 aa12.26□□□□□ -0.45
SPC25YER018C DID4P36108 232 aa12.25□□□□□ -0.45
SPC25YER018C BSD2P38356 321 aa12.25□□□□□ -0.45
SPC25YER018C BNI5P53890 448 aaKnown RBP12.25□□□□□ -0.45
SPC25YER018C FAR11P53917 953 aa12.25□□□□□ -0.45
SPC25YER018C HVG1P0CE11 249 aa12.24□□□□□ -0.45
SPC25YER018C THR4P16120 514 aaKnown RBP12.24□□□□□ -0.45
SPC25YER018C ELM1P32801 640 aa12.24□□□□□ -0.45
SPC25YER018C PHO88P38264 188 aaPredicted RBP12.24□□□□□ -0.45
SPC25YER018C DSE4P53753 1117 aa12.24□□□□□ -0.45
SPC25YER018C JIP4Q03361 876 aa12.24□□□□□ -0.45
SPC25YER018C TRS120Q04183 1289 aa12.24□□□□□ -0.45
SPC25YER018C CSM3Q04659 317 aa12.24□□□□□ -0.45
SPC25YER018C UBX5Q06682 500 aa12.24□□□□□ -0.45
SPC25YER018C YOR296WQ08748 1289 aa12.24□□□□□ -0.45
SPC25YER018C OXR1Q08952 273 aa12.24□□□□□ -0.45
SPC25YER018C SAM1P10659 382 aaKnown RBP12.23□□□□□ -0.45
SPC25YER018C RVS167P39743 482 aaKnown RBP12.23□□□□□ -0.45
SPC25YER018C NET1P47035 1189 aa12.23□□□□□ -0.45
SPC25YER018C AIM44Q99299 758 aa12.23□□□□□ -0.45
SPC25YER018C URA1P28272 314 aaPredicted RBP12.22□□□□□ -0.45
SPC25YER018C RET3P53600 189 aa12.22□□□□□ -0.45
SPC25YER018C RBA50Q04418 439 aa12.22□□□□□ -0.45
SPC25YER018C SLK19Q08581 821 aaKnown RBP12.22□□□□□ -0.45
SPC25YER018C RKM4Q12504 494 aa12.22□□□□□ -0.45
SPC25YER018C PTC5Q12511 572 aa12.22□□□□□ -0.45
SPC25YER018C DDP1Q99321 188 aaKnown RBP12.22□□□□□ -0.45
SPC25YER018C PAN5P38787 379 aa12.21□□□□□ -0.45
SPC25YER018C STT3P39007 718 aaKnown RBP12.21□□□□□ -0.45
SPC25YER018C RTC4P53850 401 aa12.21□□□□□ -0.45
SPC25YER018C ETT1Q08421 412 aaKnown RBP12.21□□□□□ -0.45
SPC25YER018C CFT2Q12102 859 aaPredicted RBP12.21□□□□□ -0.45
SPC25YER018C TUF1P02992 437 aaKnown RBP12.2□□□□□ -0.46
SPC25YER018C VMA2P16140 517 aaKnown RBP12.2□□□□□ -0.46
SPC25YER018C RPN12P32496 274 aa12.2□□□□□ -0.46
SPC25YER018C IXR1P33417 597 aa12.2□□□□□ -0.46
SPC25YER018C RFT1P38206 574 aaPredicted RBP12.2□□□□□ -0.46
SPC25YER018C SUL1P38359 859 aa12.2□□□□□ -0.46
SPC25YER018C ORC6P38826 435 aa12.2□□□□□ -0.46
SPC25YER018C CIT3P43635 486 aa12.2□□□□□ -0.46
SPC25YER018C YGR273CP53329 174 aa12.2□□□□□ -0.46
SPC25YER018C ALD6P54115 500 aaKnown RBP12.2□□□□□ -0.46
SPC25YER018C VMS1Q04311 632 aaKnown RBP12.2□□□□□ -0.46
SPC25YER018C TMA64Q04600 565 aaKnown RBP12.2□□□□□ -0.46
SPC25YER018C ALG1P16661 449 aa12.19□□□□□ -0.46
SPC25YER018C TGL1P34163 548 aa12.19□□□□□ -0.46
SPC25YER018C YKR018CP36114 725 aa12.19□□□□□ -0.46
SPC25YER018C SDA1P53313 767 aaKnown RBP12.19□□□□□ -0.46
SPC25YER018C AIM33Q04516 312 aa12.19□□□□□ -0.46
SPC25YER018C CST9Q06032 482 aa12.19□□□□□ -0.46
SPC25YER018C MMR1Q06324 491 aa12.19□□□□□ -0.46
SPC25YER018C SRO9P25567 434 aaKnown RBP12.18□□□□□ -0.46
SPC25YER018C MCM4P30665 933 aaKnown RBP12.18□□□□□ -0.46
SPC25YER018C ASH1P34233 588 aa12.18□□□□□ -0.46
SPC25YER018C APE3P37302 537 aaKnown RBP12.18□□□□□ -0.46
SPC25YER018C LIF1P53150 421 aa12.18□□□□□ -0.46
SPC25YER018C TRS33Q99394 268 aa12.18□□□□□ -0.46
SPC25YER018C PHR1P05066 565 aaKnown RBP RIP-Chip data12.17□□□□□ -0.46not detected
SPC25YER018C SES1P07284 462 aaKnown RBP12.17□□□□□ -0.46
SPC25YER018C GPA1P08539 472 aa12.17□□□□□ -0.46
SPC25YER018C CLC1P17891 233 aa12.17□□□□□ -0.46
SPC25YER018C GSY1P23337 708 aa12.17□□□□□ -0.46
SPC25YER018C UTR4P32626 227 aa12.17□□□□□ -0.46
SPC25YER018C RSC30P38781 883 aa12.17□□□□□ -0.46
SPC25YER018C YER130CP39959 443 aa12.17□□□□□ -0.46
SPC25YER018C ATG32P40458 529 aa12.17□□□□□ -0.46
SPC25YER018C SPH1Q06160 661 aa12.17□□□□□ -0.46
SPC25YER018C MCM3P24279 971 aaKnown RBP12.16□□□□□ -0.46
SPC25YER018C UGA4P32837 571 aa12.16□□□□□ -0.46
SPC25YER018C YKT6P36015 200 aaKnown RBP12.16□□□□□ -0.46
SPC25YER018C ERG7P38604 731 aa12.16□□□□□ -0.46
SPC25YER018C GPB2P39717 880 aa12.16□□□□□ -0.46
SPC25YER018C YPT11P48559 417 aa12.16□□□□□ -0.46
SPC25YER018C CUE3P53137 624 aaKnown RBP12.16□□□□□ -0.46
SPC25YER018C YAF9P53930 226 aa12.16□□□□□ -0.46
SPC25YER018C ILV1P00927 576 aaKnown RBP12.15□□□□□ -0.46
SPC25YER018C CDC60P26637 1090 aaKnown RBP12.15□□□□□ -0.46
SPC25YER018C SHP1P34223 423 aa12.15□□□□□ -0.46
SPC25YER018C GAA1P39012 614 aa12.15□□□□□ -0.46
SPC25YER018C SPR3P41901 512 aa12.15□□□□□ -0.46
SPC25YER018C KRE33P53914 1056 aaKnown RBP12.15□□□□□ -0.46
SPC25YER018C DUS3Q06053 668 aaKnown RBP12.15□□□□□ -0.46
SPC25YER018C SGD1Q06132 899 aa12.15□□□□□ -0.46
SPC25YER018C PSR2Q07949 397 aa12.15□□□□□ -0.46
SPC25YER018C ARP6Q12509 438 aa12.15□□□□□ -0.46
SPC25YER018C HIS4P00815 799 aaKnown RBP12.14□□□□□ -0.47
SPC25YER018C PKC1P24583 1151 aa12.14□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 146.1 ms