RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	DDP1	Q99321	188 aa	Known RBP	8.25	□□□□□ -1.09
SKP1	YDR328C	RAD18	P10862	487 aa		8.24	□□□□□ -1.09
SKP1	YDR328C	RPL8A	P17076	256 aa	Known RBP	8.24	□□□□□ -1.09
SKP1	YDR328C	MCM3	P24279	971 aa	Known RBP	8.24	□□□□□ -1.09
SKP1	YDR328C	YDJ1	P25491	409 aa	Known RBP	8.24	□□□□□ -1.09
SKP1	YDR328C	PER1	P25625	357 aa		8.24	□□□□□ -1.09
SKP1	YDR328C	URA1	P28272	314 aa	Predicted RBP	8.24	□□□□□ -1.09
SKP1	YDR328C	PHO88	P38264	188 aa	Predicted RBP	8.24	□□□□□ -1.09
SKP1	YDR328C	TPM2	P40414	161 aa		8.24	□□□□□ -1.09
SKP1	YDR328C	LYS14	P40971	790 aa		8.24	□□□□□ -1.09
SKP1	YDR328C	PTC5	Q12511	572 aa		8.24	□□□□□ -1.09
SKP1	YDR328C	HXK1	P04806	485 aa	Known RBP	8.23	□□□□□ -1.09
SKP1	YDR328C	HVG1	P0CE11	249 aa		8.23	□□□□□ -1.09
SKP1	YDR328C	ALG1	P16661	449 aa		8.23	□□□□□ -1.09
SKP1	YDR328C	RVS167	P39743	482 aa	Known RBP	8.23	□□□□□ -1.09
SKP1	YDR328C	VAB2	P40003	282 aa		8.23	□□□□□ -1.09
SKP1	YDR328C	RSM25	P40496	264 aa		8.23	□□□□□ -1.09
SKP1	YDR328C	NET1	P47035	1189 aa		8.23	□□□□□ -1.09
SKP1	YDR328C	CSC1	Q06538	782 aa		8.23	□□□□□ -1.09
SKP1	YDR328C	UBX5	Q06682	500 aa		8.23	□□□□□ -1.09
SKP1	YDR328C	YOR296W	Q08748	1289 aa		8.23	□□□□□ -1.09
SKP1	YDR328C	TIP41	Q12199	356 aa		8.23	□□□□□ -1.09
SKP1	YDR328C	FKS1	P38631	1876 aa	Known RBP	8.23	□□□□□ -1.09
SKP1	YDR328C	THR4	P16120	514 aa	Known RBP	8.22	□□□□□ -1.09
SKP1	YDR328C	RGP1	P16664	663 aa		8.22	□□□□□ -1.09
SKP1	YDR328C	RPN12	P32496	274 aa		8.22	□□□□□ -1.09
SKP1	YDR328C	BSD2	P38356	321 aa		8.22	□□□□□ -1.09
SKP1	YDR328C	PAN5	P38787	379 aa		8.22	□□□□□ -1.09
SKP1	YDR328C	NDT80	P38830	627 aa		8.22	□□□□□ -1.09
SKP1	YDR328C	CUE3	P53137	624 aa	Known RBP	8.22	□□□□□ -1.09
SKP1	YDR328C	TMA64	Q04600	565 aa	Known RBP	8.22	□□□□□ -1.09
SKP1	YDR328C	SMD2	Q06217	110 aa	Known RBP	8.22	□□□□□ -1.09
SKP1	YDR328C	NBL1	Q3E7Y6	73 aa		8.22	□□□□□ -1.09
SKP1	YDR328C	TOM1	Q03280	3268 aa		8.22	□□□□□ -1.09
SKP1	YDR328C	MCM4	P30665	933 aa	Known RBP	8.21	□□□□□ -1.1
SKP1	YDR328C	UGA4	P32837	571 aa		8.21	□□□□□ -1.1
SKP1	YDR328C	TGL1	P34163	548 aa		8.21	□□□□□ -1.1
SKP1	YDR328C	SAS3	P34218	831 aa		8.21	□□□□□ -1.1
SKP1	YDR328C	STT3	P39007	718 aa	Known RBP	8.21	□□□□□ -1.1
SKP1	YDR328C	FMS1	P50264	508 aa		8.21	□□□□□ -1.1
SKP1	YDR328C	ALD6	P54115	500 aa	Known RBP	8.21	□□□□□ -1.1
SKP1	YDR328C	TRS120	Q04183	1289 aa		8.21	□□□□□ -1.1
SKP1	YDR328C	EIS1	Q05050	843 aa	Known RBP	8.21	□□□□□ -1.1
SKP1	YDR328C	ETT1	Q08421	412 aa	Known RBP	8.21	□□□□□ -1.1
SKP1	YDR328C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	8.2	□□□□□ -1.1	not detected
SKP1	YDR328C	KNS1	P32350	737 aa	Predicted RBP	8.2	□□□□□ -1.1
SKP1	YDR328C	DID4	P36108	232 aa		8.2	□□□□□ -1.1
SKP1	YDR328C	DAK2	P43550	591 aa		8.2	□□□□□ -1.1
SKP1	YDR328C	CIT3	P43635	486 aa		8.2	□□□□□ -1.1
SKP1	YDR328C	YPT11	P48559	417 aa		8.2	□□□□□ -1.1
SKP1	YDR328C	RTC4	P53850	401 aa		8.2	□□□□□ -1.1
SKP1	YDR328C	BNI5	P53890	448 aa	Known RBP	8.2	□□□□□ -1.1
SKP1	YDR328C	RBA50	Q04418	439 aa		8.2	□□□□□ -1.1
SKP1	YDR328C	MMR1	Q06324	491 aa		8.2	□□□□□ -1.1
SKP1	YDR328C	SLK19	Q08581	821 aa	Known RBP	8.2	□□□□□ -1.1
SKP1	YDR328C	RPL22A	P05749	121 aa	Known RBP	8.19	□□□□□ -1.1
SKP1	YDR328C	GPA1	P08539	472 aa		8.19	□□□□□ -1.1
SKP1	YDR328C	CLC1	P17891	233 aa		8.19	□□□□□ -1.1
SKP1	YDR328C	SRO9	P25567	434 aa	Known RBP	8.19	□□□□□ -1.1
SKP1	YDR328C	PWP2	P25635	923 aa	Known RBP	8.19	□□□□□ -1.1
SKP1	YDR328C	BMH1	P29311	267 aa	Known RBP	8.19	□□□□□ -1.1
SKP1	YDR328C	SUL1	P38359	859 aa		8.19	□□□□□ -1.1
SKP1	YDR328C	ATG32	P40458	529 aa		8.19	□□□□□ -1.1
SKP1	YDR328C	YGR153W	P48238	217 aa		8.19	□□□□□ -1.1
SKP1	YDR328C	DSE4	P53753	1117 aa		8.19	□□□□□ -1.1
SKP1	YDR328C	CSM3	Q04659	317 aa		8.19	□□□□□ -1.1
SKP1	YDR328C	CST9	Q06032	482 aa		8.19	□□□□□ -1.1
SKP1	YDR328C	SPH1	Q06160	661 aa		8.19	□□□□□ -1.1
SKP1	YDR328C	YLR326W	Q06170	240 aa	Known RBP	8.19	□□□□□ -1.1
SKP1	YDR328C	GUD1	Q07729	489 aa		8.19	□□□□□ -1.1
SKP1	YDR328C	CFT2	Q12102	859 aa	Predicted RBP	8.19	□□□□□ -1.1
SKP1	YDR328C	SAM1	P10659	382 aa	Known RBP	8.18	□□□□□ -1.1
SKP1	YDR328C	YKT6	P36015	200 aa	Known RBP	8.18	□□□□□ -1.1
SKP1	YDR328C	MCD4	P36051	919 aa		8.18	□□□□□ -1.1
SKP1	YDR328C	ETP1	P38748	585 aa	Known RBP	8.18	□□□□□ -1.1
SKP1	YDR328C	GPB2	P39717	880 aa		8.18	□□□□□ -1.1
SKP1	YDR328C	YER130C	P39959	443 aa		8.18	□□□□□ -1.1
SKP1	YDR328C	LIF1	P53150	421 aa		8.18	□□□□□ -1.1
SKP1	YDR328C	VMA2	P16140	517 aa	Known RBP	8.17	□□□□□ -1.1
SKP1	YDR328C	IXR1	P33417	597 aa		8.17	□□□□□ -1.1
SKP1	YDR328C	NPR3	P38742	1146 aa		8.17	□□□□□ -1.1
SKP1	YDR328C	THI6	P41835	540 aa		8.17	□□□□□ -1.1
SKP1	YDR328C	YGR273C	P53329	174 aa		8.17	□□□□□ -1.1
SKP1	YDR328C	ORC4	P54791	529 aa		8.17	□□□□□ -1.1
SKP1	YDR328C	BUL2	Q03758	920 aa	Known RBP	8.17	□□□□□ -1.1
SKP1	YDR328C	AIM33	Q04516	312 aa		8.17	□□□□□ -1.1
SKP1	YDR328C	WHI4	Q07655	649 aa	Known RBP	8.17	□□□□□ -1.1
SKP1	YDR328C	OXR1	Q08952	273 aa		8.17	□□□□□ -1.1
SKP1	YDR328C	ARP6	Q12509	438 aa		8.17	□□□□□ -1.1
SKP1	YDR328C	TRS33	Q99394	268 aa		8.17	□□□□□ -1.1
SKP1	YDR328C	HIS4	P00815	799 aa	Known RBP	8.16	□□□□□ -1.1
SKP1	YDR328C	PKC1	P24583	1151 aa		8.16	□□□□□ -1.1
SKP1	YDR328C	UTR4	P32626	227 aa		8.16	□□□□□ -1.1
SKP1	YDR328C	MOT2	P34909	587 aa	Known RBP	8.16	□□□□□ -1.1
SKP1	YDR328C	MCR1	P36060	302 aa	Known RBP	8.16	□□□□□ -1.1
SKP1	YDR328C	YKR018C	P36114	725 aa		8.16	□□□□□ -1.1
SKP1	YDR328C	APE3	P37302	537 aa	Known RBP	8.16	□□□□□ -1.1
SKP1	YDR328C	RKM3	P38222	552 aa		8.16	□□□□□ -1.1
SKP1	YDR328C	GAA1	P39012	614 aa		8.16	□□□□□ -1.1
SKP1	YDR328C	MFM1	Q02783	413 aa		8.16	□□□□□ -1.1

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms