RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W GIN4Q12263 1142 aa1.24□□□□□ -2.21
SCC2YDR180W TY1A-NL2Q12470 440 aa1.24□□□□□ -2.21
SCC2YDR180W TY1A-GR2Q12485 440 aa1.24□□□□□ -2.21
SCC2YDR180W LSO1Q3E827 93 aa1.24□□□□□ -2.21
SCC2YDR180W SWI5P08153 709 aa1.24□□□□□ -2.21
SCC2YDR180W PHO8P11491 566 aa1.24□□□□□ -2.21
SCC2YDR180W CYC8P14922 966 aa1.24□□□□□ -2.21
SCC2YDR180W CRP1P38845 465 aaKnown RBP1.24□□□□□ -2.21
SCC2YDR180W RPA14P50106 137 aa1.24□□□□□ -2.21
SCC2YDR180W RCM1P53972 490 aa1.24□□□□□ -2.21
SCC2YDR180W APL5Q08951 932 aaKnown RBP1.24□□□□□ -2.21
SCC2YDR180W RTC1Q08281 1341 aa1.23□□□□□ -2.21
SCC2YDR180W RPP0P05317 312 aaKnown RBP1.23□□□□□ -2.21
SCC2YDR180W STE11P23561 717 aa1.23□□□□□ -2.21
SCC2YDR180W GBP2P25555 427 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
SCC2YDR180W GRX4P32642 244 aa1.23□□□□□ -2.21
SCC2YDR180W BUD6P41697 788 aa1.23□□□□□ -2.21
SCC2YDR180W ZDS1P50111 915 aaKnown RBP1.23□□□□□ -2.21
SCC2YDR180W VID30P53076 958 aa1.23□□□□□ -2.21
SCC2YDR180W MON1P53129 644 aa1.23□□□□□ -2.21
SCC2YDR180W KXD1P53158 218 aa1.23□□□□□ -2.21
SCC2YDR180W GYL1Q04322 720 aa1.23□□□□□ -2.21
SCC2YDR180W FAL1Q12099 399 aaKnown RBP1.23□□□□□ -2.21
SCC2YDR180W GSC2P40989 1895 aa1.23□□□□□ -2.21
SCC2YDR180W RSF2P46974 1380 aa1.23□□□□□ -2.21
SCC2YDR180W RAD3P06839 778 aa1.23□□□□□ -2.21
SCC2YDR180W UTP7P40055 554 aaKnown RBP1.23□□□□□ -2.21
SCC2YDR180W RTT106P40161 455 aa1.23□□□□□ -2.21
SCC2YDR180W TGL3P40308 642 aa1.23□□□□□ -2.21
SCC2YDR180W TPM2P40414 161 aa1.23□□□□□ -2.21
SCC2YDR180W YIL092WP40497 633 aa1.23□□□□□ -2.21
SCC2YDR180W ULI1P43604 169 aa1.23□□□□□ -2.21
SCC2YDR180W NPA3P47122 385 aa1.23□□□□□ -2.21
SCC2YDR180W YNL050CP53952 270 aa1.23□□□□□ -2.21
SCC2YDR180W RPN4Q03465 531 aa1.23□□□□□ -2.21
SCC2YDR180W INP2Q03824 705 aa1.23□□□□□ -2.21
SCC2YDR180W CAB1Q04430 367 aa1.23□□□□□ -2.21
SCC2YDR180W COG8Q04632 607 aa1.23□□□□□ -2.21
SCC2YDR180W PUS5Q06244 254 aa1.23□□□□□ -2.21
SCC2YDR180W YLR177WQ06251 628 aa1.23□□□□□ -2.21
SCC2YDR180W NOC3Q07896 663 aaPredicted RBP1.23□□□□□ -2.21
SCC2YDR180W OXR1Q08952 273 aa1.23□□□□□ -2.21
SCC2YDR180W LYS2P07702 1392 aa1.23□□□□□ -2.21
SCC2YDR180W SPT2P06843 333 aaPredicted RBP1.23□□□□□ -2.21
SCC2YDR180W RAD2P07276 1031 aa1.23□□□□□ -2.21
SCC2YDR180W IME1P21190 360 aa1.23□□□□□ -2.21
SCC2YDR180W OLA1P38219 394 aaKnown RBP1.23□□□□□ -2.21
SCC2YDR180W HYR1P40581 163 aaKnown RBP1.23□□□□□ -2.21
SCC2YDR180W MSH4P40965 878 aaPredicted RBP1.23□□□□□ -2.21
SCC2YDR180W SPR3P41901 512 aa1.23□□□□□ -2.21
SCC2YDR180W YJR120WP47157 116 aa1.23□□□□□ -2.21
SCC2YDR180W YGL140CP53120 1219 aa1.23□□□□□ -2.21
SCC2YDR180W YGR125WP53273 1036 aa1.23□□□□□ -2.21
SCC2YDR180W SPP1Q03012 353 aa1.23□□□□□ -2.21
SCC2YDR180W HOT1Q03213 719 aa1.23□□□□□ -2.21
SCC2YDR180W SFH1Q06168 426 aa1.23□□□□□ -2.21
SCC2YDR180W ESF1Q06344 628 aaKnown RBP1.23□□□□□ -2.21
SCC2YDR180W BUD20Q08004 166 aaPredicted RBP1.23□□□□□ -2.21
SCC2YDR180W HKR1P41809 1802 aa1.23□□□□□ -2.21
SCC2YDR180W RIM15P43565 1770 aa1.23□□□□□ -2.21
SCC2YDR180W RAD27P26793 382 aa1.23□□□□□ -2.21
SCC2YDR180W CSE1P33307 960 aa1.23□□□□□ -2.21
SCC2YDR180W MOT2P34909 587 aaKnown RBP1.23□□□□□ -2.21
SCC2YDR180W VID28P40547 921 aa1.23□□□□□ -2.21
SCC2YDR180W ATG26Q06321 1198 aa1.23□□□□□ -2.21
SCC2YDR180W ESC2Q06340 456 aa1.23□□□□□ -2.21
SCC2YDR180W OPI10Q08202 246 aa1.23□□□□□ -2.21
SCC2YDR180W SIR4P11978 1358 aa1.22□□□□□ -2.21
SCC2YDR180W RPO41P13433 1351 aaKnown RBP1.22□□□□□ -2.21
SCC2YDR180W CCP1P00431 361 aa1.22□□□□□ -2.21
SCC2YDR180W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21not detected
SCC2YDR180W RPC82P32349 654 aa1.22□□□□□ -2.21
SCC2YDR180W GCD6P32501 712 aaKnown RBP1.22□□□□□ -2.21
SCC2YDR180W SEC6P32844 805 aa1.22□□□□□ -2.21
SCC2YDR180W BDH2P39713 417 aa1.22□□□□□ -2.21
SCC2YDR180W HXT10P43581 546 aa1.22□□□□□ -2.21
SCC2YDR180W PRP43P53131 767 aaKnown RBP1.22□□□□□ -2.21
SCC2YDR180W HEL2Q05580 639 aaKnown RBP1.22□□□□□ -2.21
SCC2YDR180W INP54Q08227 384 aaKnown RBP1.22□□□□□ -2.21
SCC2YDR180W DNL4Q08387 944 aaPredicted RBP1.22□□□□□ -2.21
SCC2YDR180W FLC1Q08967 793 aa1.22□□□□□ -2.21
SCC2YDR180W NCR1Q12200 1170 aa1.22□□□□□ -2.21
SCC2YDR180W UBR1P19812 1950 aa1.22□□□□□ -2.21
SCC2YDR180W PMD1P32634 1753 aa1.22□□□□□ -2.21
SCC2YDR180W PRE9P23638 258 aaKnown RBP1.22□□□□□ -2.21
SCC2YDR180W MCM5P29496 775 aaKnown RBP1.22□□□□□ -2.21
SCC2YDR180W SWI3P32591 825 aa1.22□□□□□ -2.21
SCC2YDR180W UTR2P32623 467 aa1.22□□□□□ -2.21
SCC2YDR180W KTR2P33550 425 aa1.22□□□□□ -2.21
SCC2YDR180W YFL034WP43564 1073 aa1.22□□□□□ -2.21
SCC2YDR180W SMC3P47037 1230 aa1.22□□□□□ -2.21
SCC2YDR180W ALO1P54783 526 aaKnown RBP1.22□□□□□ -2.21
SCC2YDR180W MRL1Q06815 381 aa1.22□□□□□ -2.21
SCC2YDR180W LAM4P38800 1345 aa1.22□□□□□ -2.21
SCC2YDR180W KAR1P11927 433 aa1.22□□□□□ -2.21
SCC2YDR180W ABD1P32783 436 aaPredicted RBP1.22□□□□□ -2.21
SCC2YDR180W STE5P32917 917 aa1.22□□□□□ -2.21
SCC2YDR180W YBR184WP38299 523 aa1.22□□□□□ -2.21
SCC2YDR180W RSP5P39940 809 aaKnown RBP1.22□□□□□ -2.21
SCC2YDR180W MRPS18P42847 217 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms