RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	SOH1	P38633	127 aa		5.43	□□□□□ -1.54
SUP35	YDR172W	HYR1	P40581	163 aa	Known RBP	5.43	□□□□□ -1.54
SUP35	YDR172W	HST3	P53687	447 aa		5.43	□□□□□ -1.54
SUP35	YDR172W	DPH6	Q12429	685 aa		5.43	□□□□□ -1.54
SUP35	YDR172W	FRS2	P15625	503 aa	Known RBP	5.43	□□□□□ -1.54
SUP35	YDR172W	TTI1	P36097	1038 aa		5.43	□□□□□ -1.54
SUP35	YDR172W	RKM3	P38222	552 aa		5.43	□□□□□ -1.54
SUP35	YDR172W	OSH3	P38713	996 aa	Known RBP	5.43	□□□□□ -1.54
SUP35	YDR172W	YIR042C	P40586	236 aa		5.43	□□□□□ -1.54
SUP35	YDR172W	SYF1	Q04048	859 aa	Predicted RBP	5.43	□□□□□ -1.54
SUP35	YDR172W	LCD1	Q04377	747 aa		5.43	□□□□□ -1.54
SUP35	YDR172W	UTP13	Q05946	817 aa	Known RBP	5.43	□□□□□ -1.54
SUP35	YDR172W	ISR1	Q06098	443 aa	Known RBP	5.43	□□□□□ -1.54
SUP35	YDR172W	RDS1	P25611	832 aa		5.42	□□□□□ -1.54
SUP35	YDR172W	FBP26	P32604	452 aa		5.42	□□□□□ -1.54
SUP35	YDR172W	GRX7	P38068	203 aa		5.42	□□□□□ -1.54
SUP35	YDR172W	ICP55	P40051	511 aa		5.42	□□□□□ -1.54
SUP35	YDR172W	KAR5	Q04746	504 aa		5.42	□□□□□ -1.54
SUP35	YDR172W	INM2	Q05533	292 aa		5.42	□□□□□ -1.54
SUP35	YDR172W	ESF1	Q06344	628 aa	Known RBP	5.42	□□□□□ -1.54
SUP35	YDR172W	FIG2	P25653	1609 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	TPM1	P17536	199 aa	Known RBP	5.41	□□□□□ -1.54
SUP35	YDR172W	PEP3	P27801	918 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	ATG3	P40344	310 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	RSM25	P40496	264 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	ECM23	Q02710	187 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	PPM2	Q08282	695 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	TAH18	Q12181	623 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	HKR1	P41809	1802 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	CHO2	P05374	869 aa	Known RBP	5.41	□□□□□ -1.54
SUP35	YDR172W	PIF1	P07271	859 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	FRD1	P32614	470 aa	Known RBP	5.41	□□□□□ -1.54
SUP35	YDR172W	MAL33	P38157	468 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	SPL2	P38839	148 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	CCT5	P40413	562 aa	Known RBP	5.41	□□□□□ -1.54
SUP35	YDR172W	EPL1	P43572	832 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	SSL2	Q00578	843 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	DFG5	Q05031	458 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	ELG1	Q12050	791 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	YPL150W	Q12152	901 aa		5.41	□□□□□ -1.54
SUP35	YDR172W	FAS2	P19097	1887 aa	Known RBP	5.4	□□□□□ -1.54
SUP35	YDR172W	COQ1	P18900	473 aa		5.4	□□□□□ -1.54
SUP35	YDR172W	ELM1	P32801	640 aa		5.4	□□□□□ -1.54
SUP35	YDR172W	RPT3	P33298	428 aa	Known RBP	5.4	□□□□□ -1.54
SUP35	YDR172W	MET1	P36150	593 aa		5.4	□□□□□ -1.54
SUP35	YDR172W	PFF1	P38244	976 aa		5.4	□□□□□ -1.54
SUP35	YDR172W	RFC5	P38251	354 aa		5.4	□□□□□ -1.54
SUP35	YDR172W	YJR115W	P47152	169 aa		5.4	□□□□□ -1.54
SUP35	YDR172W	ENP2	P48234	707 aa	Known RBP	5.4	□□□□□ -1.54
SUP35	YDR172W	YKE2	P52553	114 aa		5.4	□□□□□ -1.54
SUP35	YDR172W	PEX14	P53112	341 aa		5.4	□□□□□ -1.54
SUP35	YDR172W	ISU1	Q03020	165 aa		5.4	□□□□□ -1.54
SUP35	YDR172W	AIM44	Q99299	758 aa		5.4	□□□□□ -1.54
SUP35	YDR172W	TRS33	Q99394	268 aa		5.4	□□□□□ -1.54
SUP35	YDR172W	MATALPHA2	P0CY08	210 aa		5.39	□□□□□ -1.55
SUP35	YDR172W	HMLALPHA2	P0CY09	210 aa		5.39	□□□□□ -1.55
SUP35	YDR172W	STE6	P12866	1290 aa		5.39	□□□□□ -1.55
SUP35	YDR172W	SMY1	P32364	656 aa	Known RBP	5.39	□□□□□ -1.55
SUP35	YDR172W	YHL017W	P38745	532 aa		5.39	□□□□□ -1.55
SUP35	YDR172W	BRE2	P43132	505 aa		5.39	□□□□□ -1.55
SUP35	YDR172W	MSN5	P52918	1224 aa		5.39	□□□□□ -1.55
SUP35	YDR172W	RPT4	P53549	437 aa	Known RBP	5.39	□□□□□ -1.55
SUP35	YDR172W	YLR407W	Q06070	228 aa		5.39	□□□□□ -1.55
SUP35	YDR172W	PSK2	Q08217	1101 aa		5.39	□□□□□ -1.55
SUP35	YDR172W	LCB1	P25045	558 aa	Known RBP	5.39	□□□□□ -1.55
SUP35	YDR172W	MCM2	P29469	868 aa		5.39	□□□□□ -1.55
SUP35	YDR172W	NUG1	P40010	520 aa	Known RBP	5.39	□□□□□ -1.55
SUP35	YDR172W	IRC8	P47046	822 aa		5.39	□□□□□ -1.55
SUP35	YDR172W	PIL1	P53252	339 aa	Known RBP	5.39	□□□□□ -1.55
SUP35	YDR172W	HDA1	P53973	706 aa		5.39	□□□□□ -1.55
SUP35	YDR172W	RER2	P35196	286 aa		5.38	□□□□□ -1.55
SUP35	YDR172W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.38	□□□□□ -1.55	not detected
SUP35	YDR172W	PTK2	P47116	818 aa	Known RBP	5.38	□□□□□ -1.55
SUP35	YDR172W	CTR9	P89105	1077 aa		5.38	□□□□□ -1.55
SUP35	YDR172W	IRC4	Q03036	179 aa		5.38	□□□□□ -1.55
SUP35	YDR172W	SPN1	Q06505	410 aa	Predicted RBP	5.38	□□□□□ -1.55
SUP35	YDR172W	HCA4	P20448	770 aa	Known RBP	5.38	□□□□□ -1.55
SUP35	YDR172W	SIS2	P36024	562 aa		5.38	□□□□□ -1.55
SUP35	YDR172W	NPR3	P38742	1146 aa		5.38	□□□□□ -1.55
SUP35	YDR172W	BUD6	P41697	788 aa		5.38	□□□□□ -1.55
SUP35	YDR172W	ERO1	Q03103	563 aa		5.38	□□□□□ -1.55
SUP35	YDR172W	UBX2	Q04228	584 aa		5.38	□□□□□ -1.55
SUP35	YDR172W	VMS1	Q04311	632 aa	Known RBP	5.38	□□□□□ -1.55
SUP35	YDR172W	SSF2	Q12153	453 aa	Predicted RBP	5.38	□□□□□ -1.55
SUP35	YDR172W	KRE2	P27809	442 aa		5.37	□□□□□ -1.55
SUP35	YDR172W	YKL222C	P35995	705 aa		5.37	□□□□□ -1.55
SUP35	YDR172W	PTK1	P36002	662 aa	Predicted RBP	5.37	□□□□□ -1.55
SUP35	YDR172W	CRG1	P38892	291 aa	RIP-Chip data	5.37	□□□□□ -1.55	not detected
SUP35	YDR172W	AKR1	P39010	764 aa		5.37	□□□□□ -1.55
SUP35	YDR172W	EST2	Q06163	884 aa		5.37	□□□□□ -1.55
SUP35	YDR172W	TOS4	Q06266	489 aa		5.37	□□□□□ -1.55
SUP35	YDR172W	DDP1	Q99321	188 aa	Known RBP	5.37	□□□□□ -1.55
SUP35	YDR172W	SPT2	P06843	333 aa	Predicted RBP	5.36	□□□□□ -1.55
SUP35	YDR172W	GPA1	P08539	472 aa		5.36	□□□□□ -1.55
SUP35	YDR172W	MIC60	P36112	540 aa		5.36	□□□□□ -1.55
SUP35	YDR172W	KTR7	P40504	517 aa		5.36	□□□□□ -1.55
SUP35	YDR172W	SGD1	Q06132	899 aa		5.36	□□□□□ -1.55
SUP35	YDR172W	HDA3	Q06623	655 aa		5.36	□□□□□ -1.55
SUP35	YDR172W	BDS1	Q08347	646 aa		5.36	□□□□□ -1.55
SUP35	YDR172W	HSP82	P02829	709 aa	Known RBP	5.36	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms