RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C JIP5Q06214 492 aaPredicted RBP2.74□□□□□ -1.97
SWI5YDR146C PUS1Q12211 544 aaKnown RBP2.74□□□□□ -1.97
SWI5YDR146C CLN2P20438 545 aa2.73□□□□□ -1.97
SWI5YDR146C RER2P35196 286 aa2.73□□□□□ -1.97
SWI5YDR146C GPT2P36148 743 aa2.73□□□□□ -1.97
SWI5YDR146C YAR028WP39548 234 aa2.73□□□□□ -1.97
SWI5YDR146C MSH4P40965 878 aaPredicted RBP2.73□□□□□ -1.97
SWI5YDR146C FAA4P47912 694 aaKnown RBP2.73□□□□□ -1.97
SWI5YDR146C ALT1P52893 592 aa2.73□□□□□ -1.97
SWI5YDR146C EST2Q06163 884 aa2.73□□□□□ -1.97
SWI5YDR146C SMY2P32909 740 aaKnown RBP2.72□□□□□ -1.97
SWI5YDR146C RAT1Q02792 1006 aaKnown RBP2.72□□□□□ -1.97
SWI5YDR146C TMA46Q12000 345 aaKnown RBP2.72□□□□□ -1.97
SWI5YDR146C TRP2P00899 507 aaKnown RBP2.72□□□□□ -1.97
SWI5YDR146C TAT1P38085 619 aa2.72□□□□□ -1.97
SWI5YDR146C ELA1P53861 379 aaPredicted RBP2.72□□□□□ -1.97
SWI5YDR146C ALD6P54115 500 aaKnown RBP2.72□□□□□ -1.97
SWI5YDR146C YPL034WQ03083 165 aa2.72□□□□□ -1.97
SWI5YDR146C RSA3Q05942 220 aaKnown RBP2.72□□□□□ -1.97
SWI5YDR146C SSF2Q12153 453 aaPredicted RBP2.72□□□□□ -1.97
SWI5YDR146C DBP5P20449 482 aaKnown RBP2.71□□□□□ -1.98
SWI5YDR146C NNK1P36003 928 aa2.71□□□□□ -1.98
SWI5YDR146C TAT2P38967 592 aa2.71□□□□□ -1.98
SWI5YDR146C MPH1P40562 993 aa2.71□□□□□ -1.98
SWI5YDR146C EAR1Q03212 550 aa2.71□□□□□ -1.98
SWI5YDR146C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
SWI5YDR146C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
SWI5YDR146C SYP1P25623 870 aaKnown RBP2.71□□□□□ -1.98
SWI5YDR146C NAM7P30771 971 aaKnown RBP2.71□□□□□ -1.98
SWI5YDR146C LYP1P32487 611 aa2.71□□□□□ -1.98
SWI5YDR146C ALG3P38179 458 aa2.71□□□□□ -1.98
SWI5YDR146C SAF1P38352 637 aa2.71□□□□□ -1.98
SWI5YDR146C MAD1P40957 749 aa2.71□□□□□ -1.98
SWI5YDR146C CNN1P43618 361 aa2.71□□□□□ -1.98
SWI5YDR146C TIF35Q04067 274 aaKnown RBP2.71□□□□□ -1.98
SWI5YDR146C GIC2Q06648 383 aa2.71□□□□□ -1.98
SWI5YDR146C YLR122CQ12312 125 aa2.71□□□□□ -1.98
SWI5YDR146C DED1P06634 604 aaKnown RBP2.7□□□□□ -1.98
SWI5YDR146C YKL069WP36088 180 aa2.7□□□□□ -1.98
SWI5YDR146C SEA4P38164 1038 aa2.7□□□□□ -1.98
SWI5YDR146C QNS1P38795 714 aaKnown RBP2.7□□□□□ -1.98
SWI5YDR146C AKR1P39010 764 aa2.7□□□□□ -1.98
SWI5YDR146C VAC8P39968 578 aa2.7□□□□□ -1.98
SWI5YDR146C VPS53P47061 822 aa2.7□□□□□ -1.98
SWI5YDR146C GDE1Q02979 1223 aa2.7□□□□□ -1.98
SWI5YDR146C YLR257WQ06146 321 aaKnown RBP2.7□□□□□ -1.98
SWI5YDR146C AVO1Q08236 1176 aa2.7□□□□□ -1.98
SWI5YDR146C YPL066WQ12194 479 aa2.7□□□□□ -1.98
SWI5YDR146C RPS4AP0CX35 261 aaKnown RBP2.69□□□□□ -1.98
SWI5YDR146C RPS4BP0CX36 261 aaKnown RBP2.69□□□□□ -1.98
SWI5YDR146C RET1P22276 1149 aaKnown RBP2.69□□□□□ -1.98
SWI5YDR146C NFS1P25374 497 aa2.69□□□□□ -1.98
SWI5YDR146C RGD1P38339 666 aa2.69□□□□□ -1.98
SWI5YDR146C TYW3P53177 273 aa2.69□□□□□ -1.98
SWI5YDR146C AOS1Q06624 347 aa2.69□□□□□ -1.98
SWI5YDR146C PUS7Q08647 676 aaKnown RBP2.69□□□□□ -1.98
SWI5YDR146C LAP2Q10740 671 aa2.69□□□□□ -1.98
SWI5YDR146C RAD27P26793 382 aa2.69□□□□□ -1.98
SWI5YDR146C OCA5P38738 679 aa2.69□□□□□ -1.98
SWI5YDR146C HSE1P38753 452 aa2.69□□□□□ -1.98
SWI5YDR146C YJL045WP47052 634 aa2.69□□□□□ -1.98
SWI5YDR146C YNR063WP53749 607 aa2.69□□□□□ -1.98
SWI5YDR146C ESC2Q06340 456 aa2.69□□□□□ -1.98
SWI5YDR146C OPI10Q08202 246 aa2.69□□□□□ -1.98
SWI5YDR146C YVC1Q12324 675 aa2.69□□□□□ -1.98
SWI5YDR146C PTC5Q12511 572 aa2.69□□□□□ -1.98
SWI5YDR146C SAM35P14693 329 aa2.68□□□□□ -1.98
SWI5YDR146C BAP2P38084 609 aa2.68□□□□□ -1.98
SWI5YDR146C MMM1P41800 426 aa2.68□□□□□ -1.98
SWI5YDR146C OYE3P41816 400 aaPredicted RBP2.68□□□□□ -1.98
SWI5YDR146C LSB3P43603 459 aaKnown RBP2.68□□□□□ -1.98
SWI5YDR146C ORC1P54784 914 aaPredicted RBP2.68□□□□□ -1.98
SWI5YDR146C YPL260WQ08977 551 aa2.68□□□□□ -1.98
SWI5YDR146C SNF5P18480 905 aa2.68□□□□□ -1.98
SWI5YDR146C AGP1P25376 633 aa2.68□□□□□ -1.98
SWI5YDR146C KIP1P28742 1111 aa2.68□□□□□ -1.98
SWI5YDR146C WHI3P34761 661 aaKnown RBP2.68□□□□□ -1.98
SWI5YDR146C SPF1P39986 1215 aaKnown RBP2.68□□□□□ -1.98
SWI5YDR146C RPN3P40016 523 aaKnown RBP2.68□□□□□ -1.98
SWI5YDR146C CIT3P43635 486 aa2.68□□□□□ -1.98
SWI5YDR146C HNT2P49775 206 aa2.68□□□□□ -1.98
SWI5YDR146C HRK1Q08732 759 aaKnown RBP2.68□□□□□ -1.98
SWI5YDR146C GNT1Q12096 491 aa2.68□□□□□ -1.98
SWI5YDR146C RKM4Q12504 494 aa2.68□□□□□ -1.98
SWI5YDR146C YER152CP10356 443 aa2.67□□□□□ -1.98
SWI5YDR146C INO1P11986 533 aa2.67□□□□□ -1.98
SWI5YDR146C MSB1P21339 1137 aaKnown RBP2.67□□□□□ -1.98
SWI5YDR146C SBA1P28707 216 aaKnown RBP2.67□□□□□ -1.98
SWI5YDR146C MLS1P30952 554 aa2.67□□□□□ -1.98
SWI5YDR146C COQ2P32378 372 aa2.67□□□□□ -1.98
SWI5YDR146C YKR073CP36153 106 aa2.67□□□□□ -1.98
SWI5YDR146C PEX7P39108 375 aa2.67□□□□□ -1.98
SWI5YDR146C SIP5P40210 489 aaKnown RBP2.67□□□□□ -1.98
SWI5YDR146C NRD1P53617 575 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
SWI5YDR146C TPP1Q03796 238 aa2.67□□□□□ -1.98
SWI5YDR146C SHE9Q04172 456 aa2.67□□□□□ -1.98
SWI5YDR146C YOR059CQ08448 450 aaKnown RBP2.67□□□□□ -1.98
SWI5YDR146C TRP3P00937 484 aa2.66□□□□□ -1.98
SWI5YDR146C GCD1P09032 578 aaPredicted RBP2.66□□□□□ -1.98
SWI5YDR146C CHS2P14180 963 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 87.6 ms