RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W GUP1P53154 560 aa7.65□□□□□ -1.18
TRP1YDR007W TY1A-LR4P0C2I8 440 aaKnown RBP7.64□□□□□ -1.19
TRP1YDR007W ERR1P0CX10 437 aa7.64□□□□□ -1.19
TRP1YDR007W ERR2P0CX11 437 aa7.64□□□□□ -1.19
TRP1YDR007W TY1A-DR6P0CX70 440 aa7.64□□□□□ -1.19
TRP1YDR007W TY1A-ER1P0CX71 440 aa7.64□□□□□ -1.19
TRP1YDR007W TY1A-LR2P0CX72 440 aa7.64□□□□□ -1.19
TRP1YDR007W TY1A-PLP0CX73 440 aa7.64□□□□□ -1.19
TRP1YDR007W TY1A-JR1P0CX74 440 aa7.64□□□□□ -1.19
TRP1YDR007W TY1A-LR3P0CX75 440 aa7.64□□□□□ -1.19
TRP1YDR007W TY1A-ML2P0CX76 440 aa7.64□□□□□ -1.19
TRP1YDR007W SYP1P25623 870 aaKnown RBP7.64□□□□□ -1.19
TRP1YDR007W ADD66P36040 267 aa7.64□□□□□ -1.19
TRP1YDR007W ATG14P38270 344 aa7.64□□□□□ -1.19
TRP1YDR007W SNF7P39929 240 aaKnown RBP7.64□□□□□ -1.19
TRP1YDR007W BRE2P43132 505 aa7.64□□□□□ -1.19
TRP1YDR007W YJR142WP47173 342 aa7.64□□□□□ -1.19
TRP1YDR007W YGL081WP53156 320 aa7.64□□□□□ -1.19
TRP1YDR007W TIF35Q04067 274 aaKnown RBP7.64□□□□□ -1.19
TRP1YDR007W TY1A-GR1Q12085 440 aa7.64□□□□□ -1.19
TRP1YDR007W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.64□□□□□ -1.19
TRP1YDR007W TY1A-OLQ92392 440 aaKnown RBP7.64□□□□□ -1.19
TRP1YDR007W PIN4P34217 668 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
TRP1YDR007W NEM1P38757 446 aa7.63□□□□□ -1.19
TRP1YDR007W SLS1P42900 643 aa7.63□□□□□ -1.19
TRP1YDR007W UTP8P53276 713 aaKnown RBP7.63□□□□□ -1.19
TRP1YDR007W CUZ1P53899 274 aa7.63□□□□□ -1.19
TRP1YDR007W HAS1Q03532 505 aaKnown RBP7.63□□□□□ -1.19
TRP1YDR007W SRC1Q03707 834 aa7.63□□□□□ -1.19
TRP1YDR007W UTP5Q04177 643 aaKnown RBP7.63□□□□□ -1.19
TRP1YDR007W RKM4Q12504 494 aa7.63□□□□□ -1.19
TRP1YDR007W TOM20P35180 183 aa7.62□□□□□ -1.19
TRP1YDR007W LEM3P42838 414 aa7.62□□□□□ -1.19
TRP1YDR007W PFD1P46988 109 aa7.62□□□□□ -1.19
TRP1YDR007W ADE12P80210 433 aaKnown RBP7.62□□□□□ -1.19
TRP1YDR007W TY1A-DR2Q03964 440 aaKnown RBP7.62□□□□□ -1.19
TRP1YDR007W PRP9P19736 530 aaKnown RBP7.61□□□□□ -1.19
TRP1YDR007W CNN1P43618 361 aa7.61□□□□□ -1.19
TRP1YDR007W YGL176CP46945 554 aa7.61□□□□□ -1.19
TRP1YDR007W RAT1Q02792 1006 aaKnown RBP7.61□□□□□ -1.19
TRP1YDR007W YIG1Q08956 461 aa7.61□□□□□ -1.19
TRP1YDR007W YDR461C-AQ2V2P7 80 aa7.61□□□□□ -1.19
TRP1YDR007W YKL107WP34251 309 aa7.6□□□□□ -1.19
TRP1YDR007W ARL1P38116 183 aaKnown RBP7.6□□□□□ -1.19
TRP1YDR007W MCM7P38132 845 aa7.6□□□□□ -1.19
TRP1YDR007W ALR2P43553 858 aa7.6□□□□□ -1.19
TRP1YDR007W ROG3P43602 733 aa7.6□□□□□ -1.19
TRP1YDR007W TY1A-MR1Q04215 440 aa7.6□□□□□ -1.19
TRP1YDR007W UBX5Q06682 500 aa7.6□□□□□ -1.19
TRP1YDR007W DBP5P20449 482 aaKnown RBP7.59□□□□□ -1.19
TRP1YDR007W PUF4P25339 888 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
TRP1YDR007W GRX4P32642 244 aa7.59□□□□□ -1.19
TRP1YDR007W SOK2P53438 785 aaPredicted RBP7.59□□□□□ -1.19
TRP1YDR007W RKM2Q03942 479 aa7.59□□□□□ -1.19
TRP1YDR007W NOP14Q99207 810 aaKnown RBP7.59□□□□□ -1.19
TRP1YDR007W SSB1P11484 613 aaKnown RBP7.58□□□□□ -1.2
TRP1YDR007W MBP1P39678 833 aa7.58□□□□□ -1.2
TRP1YDR007W SSB2P40150 613 aaKnown RBP7.58□□□□□ -1.2
TRP1YDR007W YNR063WP53749 607 aa7.58□□□□□ -1.2
TRP1YDR007W DNM1P54861 757 aa7.58□□□□□ -1.2
TRP1YDR007W TAF8Q03750 510 aa7.58□□□□□ -1.2
TRP1YDR007W AOS1Q06624 347 aa7.58□□□□□ -1.2
TRP1YDR007W YDL124WQ07551 312 aaKnown RBP7.58□□□□□ -1.2
TRP1YDR007W SRM1P21827 482 aa7.57□□□□□ -1.2
TRP1YDR007W MEC3Q02574 474 aa7.57□□□□□ -1.2
TRP1YDR007W SPO71Q03868 1245 aa7.57□□□□□ -1.2
TRP1YDR007W YPL066WQ12194 479 aa7.57□□□□□ -1.2
TRP1YDR007W CEM1P39525 442 aa7.56□□□□□ -1.2
TRP1YDR007W LYS5P50113 272 aa7.56□□□□□ -1.2
TRP1YDR007W RTA1P53047 317 aa7.56□□□□□ -1.2
TRP1YDR007W MSH2P25847 964 aa7.55□□□□□ -1.2
TRP1YDR007W REI1P38344 393 aaPredicted RBP7.55□□□□□ -1.2
TRP1YDR007W CRP1P38845 465 aaKnown RBP7.55□□□□□ -1.2
TRP1YDR007W GCV1P48015 400 aa7.55□□□□□ -1.2
TRP1YDR007W HNT2P49775 206 aa7.55□□□□□ -1.2
TRP1YDR007W SYT1Q06836 1226 aa7.55□□□□□ -1.2
TRP1YDR007W LAP2Q10740 671 aa7.55□□□□□ -1.2
TRP1YDR007W AFG2P32794 780 aa7.54□□□□□ -1.2
TRP1YDR007W ALG3P38179 458 aa7.54□□□□□ -1.2
TRP1YDR007W UBP12P39538 1254 aa7.54□□□□□ -1.2
TRP1YDR007W GIP2P40036 548 aa7.54□□□□□ -1.2
TRP1YDR007W MPH1P40562 993 aa7.54□□□□□ -1.2
TRP1YDR007W BET3P36149 193 aa7.53□□□□□ -1.2
TRP1YDR007W RGD1P38339 666 aa7.53□□□□□ -1.2
TRP1YDR007W PAN5P38787 379 aa7.53□□□□□ -1.2
TRP1YDR007W SPO74P45819 413 aa7.53□□□□□ -1.2
TRP1YDR007W YJR008WP47085 338 aa7.53□□□□□ -1.2
TRP1YDR007W HSV2P50079 448 aaPredicted RBP7.53□□□□□ -1.2
TRP1YDR007W NTG2Q08214 380 aa7.53□□□□□ -1.2
TRP1YDR007W YLL054CQ12244 843 aa7.53□□□□□ -1.2
TRP1YDR007W PTC5Q12511 572 aa7.53□□□□□ -1.2
TRP1YDR007W MLS1P30952 554 aa7.52□□□□□ -1.21
TRP1YDR007W SFP1P32432 683 aa7.52□□□□□ -1.21
TRP1YDR007W SCT1P32784 759 aa7.52□□□□□ -1.21
TRP1YDR007W CCC2P38995 1004 aa7.52□□□□□ -1.21
TRP1YDR007W LCB5Q06147 687 aaKnown RBP7.52□□□□□ -1.21
TRP1YDR007W ADR1P07248 1323 aa7.52□□□□□ -1.21
TRP1YDR007W CDC11P32458 415 aa7.51□□□□□ -1.21
TRP1YDR007W YAR028WP39548 234 aa7.51□□□□□ -1.21
TRP1YDR007W GEM1P39722 662 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms