RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W MMM1P41800 426 aa6.79□□□□□ -1.32
SHR3YDL212W INP52P50942 1183 aa6.79□□□□□ -1.32
SHR3YDL212W YNR063WP53749 607 aa6.79□□□□□ -1.32
SHR3YDL212W AFG2P32794 780 aa6.78□□□□□ -1.32
SHR3YDL212W TOS1P38288 455 aa6.78□□□□□ -1.32
SHR3YDL212W NMD3P38861 518 aaKnown RBP6.78□□□□□ -1.32
SHR3YDL212W ESF1Q06344 628 aaKnown RBP6.78□□□□□ -1.32
SHR3YDL212W MED7Q08278 222 aa6.78□□□□□ -1.32
SHR3YDL212W CYC7P00045 113 aa6.77□□□□□ -1.33
SHR3YDL212W GCD1P09032 578 aaPredicted RBP6.77□□□□□ -1.33
SHR3YDL212W OMA1P36163 345 aa6.77□□□□□ -1.33
SHR3YDL212W SEA4P38164 1038 aa6.77□□□□□ -1.33
SHR3YDL212W CIT3P43635 486 aa6.77□□□□□ -1.33
SHR3YDL212W EST2Q06163 884 aa6.77□□□□□ -1.33
SHR3YDL212W DED1P06634 604 aaKnown RBP6.76□□□□□ -1.33
SHR3YDL212W GCR1P07261 785 aa6.76□□□□□ -1.33
SHR3YDL212W PEP7P32609 515 aa6.76□□□□□ -1.33
SHR3YDL212W NNK1P36003 928 aa6.76□□□□□ -1.33
SHR3YDL212W ADD66P36040 267 aa6.76□□□□□ -1.33
SHR3YDL212W HXT13P39924 564 aa6.76□□□□□ -1.33
SHR3YDL212W CTH1P47976 325 aa6.76□□□□□ -1.33
SHR3YDL212W HXT17P53631 564 aa6.76□□□□□ -1.33
SHR3YDL212W HXT15P54854 567 aa6.76□□□□□ -1.33
SHR3YDL212W ROD1Q02805 837 aa6.76□□□□□ -1.33
SHR3YDL212W RSA3Q05942 220 aaKnown RBP6.76□□□□□ -1.33
SHR3YDL212W SDH1Q00711 640 aa6.75□□□□□ -1.33
SHR3YDL212W YLR257WQ06146 321 aaKnown RBP6.75□□□□□ -1.33
SHR3YDL212W MRL1Q06815 381 aa6.75□□□□□ -1.33
SHR3YDL212W PUS7Q08647 676 aaKnown RBP6.75□□□□□ -1.33
SHR3YDL212W RET1P22276 1149 aaKnown RBP6.74□□□□□ -1.33
SHR3YDL212W OYE3P41816 400 aaPredicted RBP6.74□□□□□ -1.33
SHR3YDL212W SIW14P53965 281 aa6.74□□□□□ -1.33
SHR3YDL212W RCM1P53972 490 aa6.74□□□□□ -1.33
SHR3YDL212W RKM2Q03942 479 aa6.74□□□□□ -1.33
SHR3YDL212W YVC1Q12324 675 aa6.74□□□□□ -1.33
SHR3YDL212W TAF13P11747 167 aa6.73□□□□□ -1.33
SHR3YDL212W RAT1Q02792 1006 aaKnown RBP6.73□□□□□ -1.33
SHR3YDL212W RMD1Q03441 430 aa6.73□□□□□ -1.33
SHR3YDL212W TPP1Q03796 238 aa6.73□□□□□ -1.33
SHR3YDL212W MAG2Q06436 670 aaKnown RBP6.73□□□□□ -1.33
SHR3YDL212W PUB1P32588 453 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33 RIP-Chip
SHR3YDL212W DUT1P33317 147 aa6.72□□□□□ -1.33
SHR3YDL212W MAC1P35192 417 aa6.72□□□□□ -1.33
SHR3YDL212W QNS1P38795 714 aaKnown RBP6.71□□□□□ -1.34
SHR3YDL212W YJL045WP47052 634 aa6.71□□□□□ -1.34
SHR3YDL212W BRE4Q07660 1125 aa6.71□□□□□ -1.34
SHR3YDL212W LAP2Q10740 671 aa6.71□□□□□ -1.34
SHR3YDL212W MKK2P32491 506 aa6.7□□□□□ -1.34
SHR3YDL212W ALG3P38179 458 aa6.7□□□□□ -1.34
SHR3YDL212W ATG14P38270 344 aa6.7□□□□□ -1.34
SHR3YDL212W HSE1P38753 452 aa6.7□□□□□ -1.34
SHR3YDL212W YOR059CQ08448 450 aaKnown RBP6.7□□□□□ -1.34
SHR3YDL212W LIP5P32875 414 aa6.69□□□□□ -1.34
SHR3YDL212W PEX7P39108 375 aa6.69□□□□□ -1.34
SHR3YDL212W NRD1P53617 575 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
SHR3YDL212W PTC5Q12511 572 aa6.68□□□□□ -1.34
SHR3YDL212W KIP1P28742 1111 aa6.67□□□□□ -1.34
SHR3YDL212W PET112P33893 541 aa6.67□□□□□ -1.34
SHR3YDL212W GPB2P39717 880 aa6.67□□□□□ -1.34
SHR3YDL212W VPS53P47061 822 aa6.67□□□□□ -1.34
SHR3YDL212W ENT3P47160 408 aa6.67□□□□□ -1.34
SHR3YDL212W HRK1Q08732 759 aaKnown RBP6.67□□□□□ -1.34
SHR3YDL212W TRE1Q08919 783 aa6.67□□□□□ -1.34
SHR3YDL212W RTT10Q08924 1013 aa6.67□□□□□ -1.34
SHR3YDL212W SAM35P14693 329 aa6.66□□□□□ -1.34
SHR3YDL212W RER2P35196 286 aa6.66□□□□□ -1.34
SHR3YDL212W EEB1Q02891 456 aa6.65□□□□□ -1.34
SHR3YDL212W CDC34P14682 295 aa6.64□□□□□ -1.35
SHR3YDL212W SYP1P25623 870 aaKnown RBP6.64□□□□□ -1.35
SHR3YDL212W PRO1P32264 428 aa6.64□□□□□ -1.35
SHR3YDL212W YHL012WP38709 493 aa6.64□□□□□ -1.35
SHR3YDL212W SSY1Q03770 852 aa6.64□□□□□ -1.35
SHR3YDL212W RCL1Q08096 367 aaPredicted RBP6.64□□□□□ -1.35
SHR3YDL212W NSI1Q12457 570 aa6.64□□□□□ -1.35
SHR3YDL212W PTC7P38797 343 aa6.63□□□□□ -1.35
SHR3YDL212W AOS1Q06624 347 aa6.63□□□□□ -1.35
SHR3YDL212W LPX1Q12405 387 aaKnown RBP6.63□□□□□ -1.35
SHR3YDL212W DBP5P20449 482 aaKnown RBP6.62□□□□□ -1.35
SHR3YDL212W YSC84P32793 468 aa6.62□□□□□ -1.35
SHR3YDL212W MET10P39692 1035 aa6.62□□□□□ -1.35
SHR3YDL212W GTS1P40956 396 aa6.62□□□□□ -1.35
SHR3YDL212W CNN1P43618 361 aa6.62□□□□□ -1.35
SHR3YDL212W HSP78P33416 811 aa6.61□□□□□ -1.35
SHR3YDL212W LRG1P35688 1017 aa6.61□□□□□ -1.35
SHR3YDL212W MNR2P35724 969 aa6.61□□□□□ -1.35
SHR3YDL212W MPH1P40562 993 aa6.61□□□□□ -1.35
SHR3YDL212W SNU71P53207 620 aaKnown RBP6.61□□□□□ -1.35
SHR3YDL212W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
SHR3YDL212W TIF35Q04067 274 aaKnown RBP6.61□□□□□ -1.35
SHR3YDL212W SPO21Q12411 609 aa6.61□□□□□ -1.35
SHR3YDL212W TRP2P00899 507 aaKnown RBP6.6□□□□□ -1.35
SHR3YDL212W ADP1P25371 1049 aa6.6□□□□□ -1.35
SHR3YDL212W RAD27P26793 382 aa6.6□□□□□ -1.35
SHR3YDL212W MLS1P30952 554 aa6.6□□□□□ -1.35
SHR3YDL212W PAM1P37304 830 aaKnown RBP6.6□□□□□ -1.35
SHR3YDL212W YFL054CP43549 646 aa6.6□□□□□ -1.35
SHR3YDL212W FAA4P47912 694 aaKnown RBP6.6□□□□□ -1.35
SHR3YDL212W RGD1P38339 666 aa6.59□□□□□ -1.35
SHR3YDL212W VPS16Q03308 798 aa6.59□□□□□ -1.35
SHR3YDL212W JIP5Q06214 492 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms