RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C NFS1P25374 497 aa2.14□□□□□ -2.07
UFD2YDL190C MCM2P29469 868 aa2.14□□□□□ -2.07
UFD2YDL190C OCA5P38738 679 aa2.14□□□□□ -2.07
UFD2YDL190C CIC1P38779 376 aaKnown RBP2.14□□□□□ -2.07
UFD2YDL190C SHU2P38957 223 aa2.14□□□□□ -2.07
UFD2YDL190C MSH4P40965 878 aaPredicted RBP2.14□□□□□ -2.07
UFD2YDL190C RPT1P33299 467 aaKnown RBP2.13□□□□□ -2.07
UFD2YDL190C SEA4P38164 1038 aa2.13□□□□□ -2.07
UFD2YDL190C NNF1P47149 201 aa2.13□□□□□ -2.07
UFD2YDL190C YGR045CP53229 120 aa2.13□□□□□ -2.07
UFD2YDL190C PDR15Q04182 1529 aaKnown RBP2.13□□□□□ -2.07
UFD2YDL190C ADP1P25371 1049 aa2.13□□□□□ -2.07
UFD2YDL190C LRG1P35688 1017 aa2.13□□□□□ -2.07
UFD2YDL190C PEX13P80667 386 aa2.13□□□□□ -2.07
UFD2YDL190C YCS4Q06156 1176 aa2.13□□□□□ -2.07
UFD2YDL190C TY1A-LR4P0C2I8 440 aaKnown RBP2.12□□□□□ -2.07
UFD2YDL190C TY1A-DR6P0CX70 440 aa2.12□□□□□ -2.07
UFD2YDL190C TY1A-ER1P0CX71 440 aa2.12□□□□□ -2.07
UFD2YDL190C TY1A-LR2P0CX72 440 aa2.12□□□□□ -2.07
UFD2YDL190C TY1A-PLP0CX73 440 aa2.12□□□□□ -2.07
UFD2YDL190C TY1A-JR1P0CX74 440 aa2.12□□□□□ -2.07
UFD2YDL190C TY1A-LR3P0CX75 440 aa2.12□□□□□ -2.07
UFD2YDL190C TY1A-ML2P0CX76 440 aa2.12□□□□□ -2.07
UFD2YDL190C NAP1P25293 417 aaKnown RBP2.12□□□□□ -2.07
UFD2YDL190C RNQ1P25367 405 aa2.12□□□□□ -2.07
UFD2YDL190C GCD6P32501 712 aaKnown RBP2.12□□□□□ -2.07
UFD2YDL190C SEG2P34250 1132 aa2.12□□□□□ -2.07
UFD2YDL190C SLS1P42900 643 aa2.12□□□□□ -2.07
UFD2YDL190C DAK2P43550 591 aa2.12□□□□□ -2.07
UFD2YDL190C RSM26P47141 266 aa2.12□□□□□ -2.07
UFD2YDL190C YNR063WP53749 607 aa2.12□□□□□ -2.07
UFD2YDL190C EAR1Q03212 550 aa2.12□□□□□ -2.07
UFD2YDL190C SPR28Q04921 423 aa2.12□□□□□ -2.07
UFD2YDL190C TY1A-GR1Q12085 440 aa2.12□□□□□ -2.07
UFD2YDL190C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.12□□□□□ -2.07
UFD2YDL190C TY1A-OLQ92392 440 aaKnown RBP2.12□□□□□ -2.07
UFD2YDL190C PRO1P32264 428 aa2.12□□□□□ -2.07
UFD2YDL190C HSP78P33416 811 aa2.12□□□□□ -2.07
UFD2YDL190C NMD3P38861 518 aaKnown RBP2.12□□□□□ -2.07
UFD2YDL190C SAP155P43612 1002 aa2.12□□□□□ -2.07
UFD2YDL190C MTR4P47047 1073 aaKnown RBP2.12□□□□□ -2.07
UFD2YDL190C AOS1Q06624 347 aa2.12□□□□□ -2.07
UFD2YDL190C TRE1Q08919 783 aa2.12□□□□□ -2.07
UFD2YDL190C DFG16Q99234 619 aa2.12□□□□□ -2.07
UFD2YDL190C SIN3P22579 1536 aa2.12□□□□□ -2.07
UFD2YDL190C PEP7P32609 515 aa2.12□□□□□ -2.07
UFD2YDL190C SMY2P32909 740 aaKnown RBP2.12□□□□□ -2.07
UFD2YDL190C VPS35P34110 944 aa2.12□□□□□ -2.07
UFD2YDL190C SQT1P35184 431 aa2.12□□□□□ -2.07
UFD2YDL190C NNK1P36003 928 aa2.12□□□□□ -2.07
UFD2YDL190C OYE3P41816 400 aaPredicted RBP2.12□□□□□ -2.07
UFD2YDL190C ALT1P52893 592 aa2.12□□□□□ -2.07
UFD2YDL190C SSY1Q03770 852 aa2.12□□□□□ -2.07
UFD2YDL190C TPP1Q03796 238 aa2.12□□□□□ -2.07
UFD2YDL190C DAL4Q04895 635 aa2.12□□□□□ -2.07
UFD2YDL190C RPS26AP39938 119 aaKnown RBP2.11□□□□□ -2.07
UFD2YDL190C RPS26BP39939 119 aaKnown RBP2.11□□□□□ -2.07
UFD2YDL190C MAD1P40957 749 aa2.11□□□□□ -2.07
UFD2YDL190C ECL1P48235 211 aa2.11□□□□□ -2.07
UFD2YDL190C ALD6P54115 500 aaKnown RBP2.11□□□□□ -2.07
UFD2YDL190C RMD1Q03441 430 aa2.11□□□□□ -2.07
UFD2YDL190C OXR1Q08952 273 aa2.11□□□□□ -2.07
UFD2YDL190C YVC1Q12324 675 aa2.11□□□□□ -2.07
UFD2YDL190C KAR2P16474 682 aaKnown RBP2.11□□□□□ -2.07
UFD2YDL190C GAS1P22146 559 aaKnown RBP2.11□□□□□ -2.07
UFD2YDL190C PRP40P33203 583 aaKnown RBP2.11□□□□□ -2.07
UFD2YDL190C ARL1P38116 183 aaKnown RBP2.11□□□□□ -2.07
UFD2YDL190C EXO5P38289 585 aa2.11□□□□□ -2.07
UFD2YDL190C HSE1P38753 452 aa2.11□□□□□ -2.07
UFD2YDL190C PTC7P38797 343 aa2.11□□□□□ -2.07
UFD2YDL190C YAR028WP39548 234 aa2.11□□□□□ -2.07
UFD2YDL190C UBP5P39944 805 aa2.11□□□□□ -2.07
UFD2YDL190C VAC8P39968 578 aa2.11□□□□□ -2.07
UFD2YDL190C GTS1P40956 396 aa2.11□□□□□ -2.07
UFD2YDL190C RET1P22276 1149 aaKnown RBP2.1□□□□□ -2.07
UFD2YDL190C MSH3P25336 1018 aa2.1□□□□□ -2.07
UFD2YDL190C NEM1P38757 446 aa2.1□□□□□ -2.07
UFD2YDL190C VPS16Q03308 798 aa2.1□□□□□ -2.07
UFD2YDL190C FPR4Q06205 392 aaPredicted RBP2.1□□□□□ -2.07
UFD2YDL190C ESF1Q06344 628 aaKnown RBP2.1□□□□□ -2.07
UFD2YDL190C LAP2Q10740 671 aa2.1□□□□□ -2.07
UFD2YDL190C ESP1Q03018 1630 aa2.1□□□□□ -2.07
UFD2YDL190C CLN2P20438 545 aa2.1□□□□□ -2.07
UFD2YDL190C ELM1P32801 640 aa2.1□□□□□ -2.07
UFD2YDL190C UGA4P32837 571 aa2.1□□□□□ -2.07
UFD2YDL190C XKS1P42826 600 aa2.1□□□□□ -2.07
UFD2YDL190C PRP43P53131 767 aaKnown RBP2.1□□□□□ -2.07
UFD2YDL190C YGR122WP53272 402 aa2.1□□□□□ -2.07
UFD2YDL190C IOC4Q04213 475 aa2.1□□□□□ -2.07
UFD2YDL190C YLR257WQ06146 321 aaKnown RBP2.1□□□□□ -2.07
UFD2YDL190C TOS4Q06266 489 aa2.1□□□□□ -2.07
UFD2YDL190C PUS7Q08647 676 aaKnown RBP2.1□□□□□ -2.07
UFD2YDL190C PIN2Q12057 282 aa2.1□□□□□ -2.07
UFD2YDL190C YOL098CQ12496 1037 aa2.1□□□□□ -2.07
UFD2YDL190C CYC8P14922 966 aa2.09□□□□□ -2.07
UFD2YDL190C FOL2P51601 243 aaKnown RBP2.09□□□□□ -2.07
UFD2YDL190C ULP1Q02724 621 aa2.09□□□□□ -2.07
UFD2YDL190C BRN1P38170 754 aa2.09□□□□□ -2.08
UFD2YDL190C PEX28P38848 579 aa2.09□□□□□ -2.08
UFD2YDL190C FAA3P39002 694 aa2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 68.2 ms