RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C PER1P25625 357 aa5.64□□□□□ -1.51
RPN6YDL097C RPT3P33298 428 aaKnown RBP5.64□□□□□ -1.51
RPN6YDL097C APL6P46682 809 aa5.64□□□□□ -1.51
RPN6YDL097C IRA1P18963 3092 aa5.64□□□□□ -1.51
RPN6YDL097C PDC1P06169 563 aaKnown RBP5.63□□□□□ -1.51
RPN6YDL097C SYN8P31377 255 aa5.63□□□□□ -1.51
RPN6YDL097C YFH7P43591 353 aa5.63□□□□□ -1.51
RPN6YDL097C YAF9P53930 226 aa5.63□□□□□ -1.51
RPN6YDL097C YNL034WP53963 612 aa5.63□□□□□ -1.51
RPN6YDL097C YNL018CP53976 612 aa5.63□□□□□ -1.51
RPN6YDL097C BUL2Q03758 920 aaKnown RBP5.63□□□□□ -1.51
RPN6YDL097C MFB1Q04922 465 aa5.63□□□□□ -1.51
RPN6YDL097C SRP40P32583 406 aaPredicted RBP5.62□□□□□ -1.51
RPN6YDL097C BRL1P38770 471 aa5.62□□□□□ -1.51
RPN6YDL097C HAL5P38970 855 aaKnown RBP5.62□□□□□ -1.51
RPN6YDL097C GPB2P39717 880 aa5.62□□□□□ -1.51
RPN6YDL097C REF2P42073 533 aaPredicted RBP5.62□□□□□ -1.51
RPN6YDL097C SGM1P47166 707 aa5.62□□□□□ -1.51
RPN6YDL097C BIO5P53744 561 aaKnown RBP5.62□□□□□ -1.51
RPN6YDL097C DAK1P54838 584 aaKnown RBP5.62□□□□□ -1.51
RPN6YDL097C HEH2Q03281 663 aa5.62□□□□□ -1.51
RPN6YDL097C LCD1Q04377 747 aa5.62□□□□□ -1.51
RPN6YDL097C LCB5Q06147 687 aaKnown RBP5.62□□□□□ -1.51
RPN6YDL097C RTP1Q12751 981 aa5.62□□□□□ -1.51
RPN6YDL097C TOM71P38825 639 aaKnown RBP5.61□□□□□ -1.51
RPN6YDL097C MVP1P40959 511 aaKnown RBP5.61□□□□□ -1.51
RPN6YDL097C YNR021WP53723 404 aaKnown RBP5.61□□□□□ -1.51
RPN6YDL097C VPS72Q03388 795 aa5.61□□□□□ -1.51
RPN6YDL097C SAC3P46674 1301 aa5.6□□□□□ -1.51
RPN6YDL097C KEX2P13134 814 aa5.6□□□□□ -1.51
RPN6YDL097C NUG1P40010 520 aaKnown RBP5.6□□□□□ -1.51
RPN6YDL097C MPP10P47083 593 aaKnown RBP5.6□□□□□ -1.51
RPN6YDL097C HST3P53687 447 aa5.6□□□□□ -1.51
RPN6YDL097C YPR109WQ06104 294 aa5.6□□□□□ -1.51
RPN6YDL097C YDL176WQ12027 708 aa5.6□□□□□ -1.51
RPN6YDL097C MET32Q12041 191 aa5.6□□□□□ -1.51
RPN6YDL097C POL3P15436 1097 aa5.59□□□□□ -1.51
RPN6YDL097C YUR1P26725 428 aa5.59□□□□□ -1.51
RPN6YDL097C GPT2P36148 743 aa5.59□□□□□ -1.51
RPN6YDL097C POA1P38218 177 aa5.59□□□□□ -1.51
RPN6YDL097C GUA1P38625 525 aaKnown RBP5.59□□□□□ -1.51
RPN6YDL097C MET13P53128 600 aa5.59□□□□□ -1.51
RPN6YDL097C SNU71P53207 620 aaKnown RBP5.59□□□□□ -1.51
RPN6YDL097C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
RPN6YDL097C TRP2P00899 507 aaKnown RBP5.58□□□□□ -1.52
RPN6YDL097C SWI6P09959 803 aa5.58□□□□□ -1.52
RPN6YDL097C KIN1P13185 1064 aa5.58□□□□□ -1.52
RPN6YDL097C KRS1P15180 591 aaKnown RBP5.58□□□□□ -1.52
RPN6YDL097C IMG2P25642 146 aaPredicted RBP5.58□□□□□ -1.52
RPN6YDL097C MSC6Q08818 692 aaKnown RBP5.58□□□□□ -1.52
RPN6YDL097C PCL8Q08966 492 aa5.58□□□□□ -1.52
RPN6YDL097C RLF2Q12495 606 aa5.58□□□□□ -1.52
RPN6YDL097C CDC19P00549 500 aaKnown RBP5.57□□□□□ -1.52
RPN6YDL097C ITC1P53125 1264 aa5.57□□□□□ -1.52
RPN6YDL097C ERF2Q06551 359 aa5.57□□□□□ -1.52
RPN6YDL097C RPP0P05317 312 aaKnown RBP5.56□□□□□ -1.52
RPN6YDL097C AFT1P22149 690 aa5.56□□□□□ -1.52
RPN6YDL097C VPS53P47061 822 aa5.56□□□□□ -1.52
RPN6YDL097C YNL050CP53952 270 aa5.56□□□□□ -1.52
RPN6YDL097C YML037CQ03703 340 aa5.56□□□□□ -1.52
RPN6YDL097C YDL124WQ07551 312 aaKnown RBP5.56□□□□□ -1.52
RPN6YDL097C PIN2Q12057 282 aa5.56□□□□□ -1.52
RPN6YDL097C PSH1Q12161 406 aa5.56□□□□□ -1.52
RPN6YDL097C COQ4O13525 335 aa5.55□□□□□ -1.52
RPN6YDL097C POX1P13711 748 aa5.55□□□□□ -1.52
RPN6YDL097C BET2P20133 325 aa5.55□□□□□ -1.52
RPN6YDL097C ARP1P38696 384 aa5.55□□□□□ -1.52
RPN6YDL097C NOP2P40991 618 aaKnown RBP5.55□□□□□ -1.52
RPN6YDL097C SPO71Q03868 1245 aa5.55□□□□□ -1.52
RPN6YDL097C SNF3P10870 884 aa5.54□□□□□ -1.52
RPN6YDL097C RGR1P19263 1082 aa5.54□□□□□ -1.52
RPN6YDL097C MDL2P33311 773 aa5.54□□□□□ -1.52
RPN6YDL097C YKR018CP36114 725 aa5.54□□□□□ -1.52
RPN6YDL097C FUN12P39730 1002 aaKnown RBP5.54□□□□□ -1.52
RPN6YDL097C PAC1P39946 494 aaKnown RBP5.54□□□□□ -1.52
RPN6YDL097C MSH4P40965 878 aaPredicted RBP5.54□□□□□ -1.52
RPN6YDL097C YGR125WP53273 1036 aa5.54□□□□□ -1.52
RPN6YDL097C LAP2Q10740 671 aa5.54□□□□□ -1.52
RPN6YDL097C HCM1P25364 564 aa5.53□□□□□ -1.52
RPN6YDL097C UTR4P32626 227 aa5.53□□□□□ -1.52
RPN6YDL097C PTK1P36002 662 aaPredicted RBP5.53□□□□□ -1.52
RPN6YDL097C CST26P38226 397 aa5.53□□□□□ -1.52
RPN6YDL097C YBR287WP38355 427 aa5.53□□□□□ -1.52
RPN6YDL097C TIF4631P39935 952 aaKnown RBP5.53□□□□□ -1.52
RPN6YDL097C SPO74P45819 413 aa5.53□□□□□ -1.52
RPN6YDL097C AZR1P50080 613 aa5.53□□□□□ -1.52
RPN6YDL097C NSG2P53898 299 aa5.53□□□□□ -1.52
RPN6YDL097C BMS1Q08965 1183 aaKnown RBP5.53□□□□□ -1.52
RPN6YDL097C DUR1,2P32528 1835 aaKnown RBP5.53□□□□□ -1.52
RPN6YDL097C PUP3P25451 205 aaKnown RBP5.52□□□□□ -1.53
RPN6YDL097C DUR3P33413 735 aa5.52□□□□□ -1.53
RPN6YDL097C SCS3P53012 380 aa5.52□□□□□ -1.53
RPN6YDL097C SLD5Q03406 294 aa5.52□□□□□ -1.53
RPN6YDL097C HCR1Q05775 265 aaKnown RBP5.52□□□□□ -1.53
RPN6YDL097C YOL057WQ08225 711 aa5.52□□□□□ -1.53
RPN6YDL097C MBR1P23493 339 aa5.51□□□□□ -1.53
RPN6YDL097C SLA1P32790 1244 aa5.51□□□□□ -1.53
RPN6YDL097C SEG2P34250 1132 aa5.51□□□□□ -1.53
RPN6YDL097C PTK2P47116 818 aaKnown RBP5.51□□□□□ -1.53
RPN6YDL097C YJR115WP47152 169 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms