RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W TAF13P11747 167 aa5.44□□□□□ -1.54
UBC9YDL064W BAS1P22035 811 aa5.44□□□□□ -1.54
UBC9YDL064W OCA5P38738 679 aa5.44□□□□□ -1.54
UBC9YDL064W DOT1Q04089 582 aaKnown RBP5.44□□□□□ -1.54
UBC9YDL064W AVO1Q08236 1176 aa5.44□□□□□ -1.54
UBC9YDL064W WRS1Q12109 432 aaKnown RBP5.44□□□□□ -1.54
UBC9YDL064W SSF2Q12153 453 aaPredicted RBP5.44□□□□□ -1.54
UBC9YDL064W YDR215CQ12240 137 aa5.44□□□□□ -1.54
UBC9YDL064W TRP2P00899 507 aaKnown RBP5.43□□□□□ -1.54
UBC9YDL064W MOT2P34909 587 aaKnown RBP5.43□□□□□ -1.54
UBC9YDL064W GPT2P36148 743 aa5.43□□□□□ -1.54
UBC9YDL064W YAR028WP39548 234 aa5.43□□□□□ -1.54
UBC9YDL064W NNF1P47149 201 aa5.43□□□□□ -1.54
UBC9YDL064W YLR225CQ05948 407 aaKnown RBP5.43□□□□□ -1.54
UBC9YDL064W YOR223WQ12015 292 aa5.43□□□□□ -1.54
UBC9YDL064W FAL1Q12099 399 aaKnown RBP5.43□□□□□ -1.54
UBC9YDL064W YLL054CQ12244 843 aa5.43□□□□□ -1.54
UBC9YDL064W LYP1P32487 611 aa5.42□□□□□ -1.54
UBC9YDL064W ABD1P32783 436 aaPredicted RBP5.42□□□□□ -1.54
UBC9YDL064W NMD3P38861 518 aaKnown RBP5.42□□□□□ -1.54
UBC9YDL064W TYW3P53177 273 aa5.42□□□□□ -1.54
UBC9YDL064W ORC1P54784 914 aaPredicted RBP5.42□□□□□ -1.54
UBC9YDL064W AI3P03877 415 aa5.41□□□□□ -1.54
UBC9YDL064W GRX1P25373 110 aaKnown RBP5.41□□□□□ -1.54
UBC9YDL064W SYP1P25623 870 aaKnown RBP5.41□□□□□ -1.54
UBC9YDL064W NAM7P30771 971 aaKnown RBP5.41□□□□□ -1.54
UBC9YDL064W SFA1P32771 386 aa5.41□□□□□ -1.54
UBC9YDL064W ALG3P38179 458 aa5.41□□□□□ -1.54
UBC9YDL064W TAT2P38967 592 aa5.41□□□□□ -1.54
UBC9YDL064W YMR187CQ03236 431 aa5.41□□□□□ -1.54
UBC9YDL064W TIF35Q04067 274 aaKnown RBP5.41□□□□□ -1.54
UBC9YDL064W SEA4P38164 1038 aa5.4□□□□□ -1.54
UBC9YDL064W ATG14P38270 344 aa5.4□□□□□ -1.54
UBC9YDL064W SPF1P39986 1215 aaKnown RBP5.4□□□□□ -1.54
UBC9YDL064W MSH4P40965 878 aaPredicted RBP5.4□□□□□ -1.54
UBC9YDL064W ENT3P47160 408 aa5.4□□□□□ -1.54
UBC9YDL064W RKM2Q03942 479 aa5.4□□□□□ -1.54
UBC9YDL064W AOS1Q06624 347 aa5.4□□□□□ -1.54
UBC9YDL064W INO1P11986 533 aa5.39□□□□□ -1.55
UBC9YDL064W RET1P22276 1149 aaKnown RBP5.39□□□□□ -1.55
UBC9YDL064W PUF4P25339 888 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
UBC9YDL064W RSC6P25632 483 aa5.39□□□□□ -1.55
UBC9YDL064W EAR1Q03212 550 aa5.39□□□□□ -1.55
UBC9YDL064W RSA3Q05942 220 aaKnown RBP5.39□□□□□ -1.55
UBC9YDL064W TDA5Q06417 326 aaKnown RBP5.39□□□□□ -1.55
UBC9YDL064W MCA1Q08601 432 aa5.39□□□□□ -1.55
UBC9YDL064W PTC5Q12511 572 aa5.39□□□□□ -1.55
UBC9YDL064W DBP5P20449 482 aaKnown RBP5.38□□□□□ -1.55
UBC9YDL064W MLS1P30952 554 aa5.38□□□□□ -1.55
UBC9YDL064W QNS1P38795 714 aaKnown RBP5.38□□□□□ -1.55
UBC9YDL064W ICP55P40051 511 aa5.38□□□□□ -1.55
UBC9YDL064W IOC3P43596 787 aa5.38□□□□□ -1.55
UBC9YDL064W CNN1P43618 361 aa5.38□□□□□ -1.55
UBC9YDL064W YLR257WQ06146 321 aaKnown RBP5.38□□□□□ -1.55
UBC9YDL064W LAP2Q10740 671 aa5.38□□□□□ -1.55
UBC9YDL064W YPL066WQ12194 479 aa5.38□□□□□ -1.55
UBC9YDL064W YPR053CQ6Q5F3 151 aa5.38□□□□□ -1.55
UBC9YDL064W NFS1P25374 497 aa5.37□□□□□ -1.55
UBC9YDL064W STE5P32917 917 aa5.37□□□□□ -1.55
UBC9YDL064W MCM7P38132 845 aa5.37□□□□□ -1.55
UBC9YDL064W MPH1P40562 993 aa5.37□□□□□ -1.55
UBC9YDL064W ARI1P53111 347 aaKnown RBP5.37□□□□□ -1.55
UBC9YDL064W PHM7Q12252 991 aa5.37□□□□□ -1.55
UBC9YDL064W YOL098CQ12496 1037 aa5.37□□□□□ -1.55
UBC9YDL064W RPS4AP0CX35 261 aaKnown RBP5.36□□□□□ -1.55
UBC9YDL064W RPS4BP0CX36 261 aaKnown RBP5.36□□□□□ -1.55
UBC9YDL064W KIP1P28742 1111 aa5.36□□□□□ -1.55
UBC9YDL064W VBA5P36172 582 aa5.36□□□□□ -1.55
UBC9YDL064W TAT1P38085 619 aa5.36□□□□□ -1.55
UBC9YDL064W SKN7P38889 622 aa5.36□□□□□ -1.55
UBC9YDL064W AKR1P39010 764 aa5.36□□□□□ -1.55
UBC9YDL064W GPB2P39717 880 aa5.36□□□□□ -1.55
UBC9YDL064W SPO20Q04359 397 aa5.36□□□□□ -1.55
UBC9YDL064W GIC2Q06648 383 aa5.36□□□□□ -1.55
UBC9YDL064W AGP1P25376 633 aa5.35□□□□□ -1.55
UBC9YDL064W SMY2P32909 740 aaKnown RBP5.35□□□□□ -1.55
UBC9YDL064W NNK1P36003 928 aa5.35□□□□□ -1.55
UBC9YDL064W YBR184WP38299 523 aa5.35□□□□□ -1.55
UBC9YDL064W MBP1P39678 833 aa5.35□□□□□ -1.55
UBC9YDL064W YGL176CP46945 554 aa5.35□□□□□ -1.55
UBC9YDL064W YER152CP10356 443 aa5.34□□□□□ -1.55
UBC9YDL064W RAD4P14736 754 aa5.34□□□□□ -1.55
UBC9YDL064W HSE1P38753 452 aa5.34□□□□□ -1.55
UBC9YDL064W VPS53P47061 822 aa5.34□□□□□ -1.55
UBC9YDL064W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
UBC9YDL064W YTA7P40340 1379 aa5.33□□□□□ -1.56
UBC9YDL064W SBA1P28707 216 aaKnown RBP5.33□□□□□ -1.56
UBC9YDL064W WHI3P34761 661 aaKnown RBP5.33□□□□□ -1.56
UBC9YDL064W RGD1P38339 666 aa5.33□□□□□ -1.56
UBC9YDL064W YJL045WP47052 634 aa5.33□□□□□ -1.56
UBC9YDL064W ALT1P52893 592 aa5.33□□□□□ -1.56
UBC9YDL064W HUL5P53119 910 aa5.33□□□□□ -1.56
UBC9YDL064W YPL034WQ03083 165 aa5.33□□□□□ -1.56
UBC9YDL064W TPP1Q03796 238 aa5.33□□□□□ -1.56
UBC9YDL064W NSE3Q05541 303 aa5.33□□□□□ -1.56
UBC9YDL064W PUS7Q08647 676 aaKnown RBP5.33□□□□□ -1.56
UBC9YDL064W SRP40P32583 406 aaPredicted RBP5.32□□□□□ -1.56
UBC9YDL064W SIP5P40210 489 aaKnown RBP5.32□□□□□ -1.56
UBC9YDL064W YFL054CP43549 646 aa5.32□□□□□ -1.56
UBC9YDL064W NAN1Q02931 896 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms