RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeast

Gene PRP11, Length 801 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP11	YDL043C	YKL077W	P36081	392 aa		4.9	□□□□□ -1.63
PRP11	YDL043C	SEA4	P38164	1038 aa		4.9	□□□□□ -1.63
PRP11	YDL043C	AMN1	P38285	549 aa	Predicted RBP	4.9	□□□□□ -1.63
PRP11	YDL043C	EXO5	P38289	585 aa		4.9	□□□□□ -1.63
PRP11	YDL043C	INP51	P40559	946 aa	Known RBP	4.9	□□□□□ -1.63
PRP11	YDL043C	YJR142W	P47173	342 aa		4.9	□□□□□ -1.63
PRP11	YDL043C	BIO5	P53744	561 aa	Known RBP	4.9	□□□□□ -1.63
PRP11	YDL043C	YLR225C	Q05948	407 aa	Known RBP	4.9	□□□□□ -1.63
PRP11	YDL043C	UBX5	Q06682	500 aa		4.9	□□□□□ -1.63
PRP11	YDL043C	SBP1	P10080	294 aa	Known RBP	4.89	□□□□□ -1.63
PRP11	YDL043C	THI4	P32318	326 aa		4.89	□□□□□ -1.63
PRP11	YDL043C	PBY1	P38254	753 aa		4.89	□□□□□ -1.63
PRP11	YDL043C	MSH4	P40965	878 aa	Predicted RBP	4.89	□□□□□ -1.63
PRP11	YDL043C	YJL181W	P46987	611 aa		4.89	□□□□□ -1.63
PRP11	YDL043C	YJR124C	P47159	448 aa		4.89	□□□□□ -1.63
PRP11	YDL043C	ROD1	Q02805	837 aa		4.89	□□□□□ -1.63
PRP11	YDL043C	ESC2	Q06340	456 aa		4.89	□□□□□ -1.63
PRP11	YDL043C	SOG2	Q08817	791 aa		4.89	□□□□□ -1.63
PRP11	YDL043C	AI1	P03875	834 aa		4.88	□□□□□ -1.63
PRP11	YDL043C	CAN1	P04817	590 aa		4.88	□□□□□ -1.63
PRP11	YDL043C	ERR1	P0CX10	437 aa		4.88	□□□□□ -1.63
PRP11	YDL043C	ERR2	P0CX11	437 aa		4.88	□□□□□ -1.63
PRP11	YDL043C	SSB1	P11484	613 aa	Known RBP	4.88	□□□□□ -1.63
PRP11	YDL043C	GRX4	P32642	244 aa		4.88	□□□□□ -1.63
PRP11	YDL043C	TFA2	P36145	328 aa		4.88	□□□□□ -1.63
PRP11	YDL043C	SSB2	P40150	613 aa	Known RBP	4.88	□□□□□ -1.63
PRP11	YDL043C	PFD1	P46988	109 aa		4.88	□□□□□ -1.63
PRP11	YDL043C	ERP6	P53198	216 aa		4.88	□□□□□ -1.63
PRP11	YDL043C	UTP8	P53276	713 aa	Known RBP	4.88	□□□□□ -1.63
PRP11	YDL043C	HTS1	P07263	546 aa	Known RBP	4.87	□□□□□ -1.63
PRP11	YDL043C	ARE1	P25628	610 aa		4.87	□□□□□ -1.63
PRP11	YDL043C	MKK2	P32491	506 aa		4.87	□□□□□ -1.63
PRP11	YDL043C	MSC7	P38694	644 aa		4.87	□□□□□ -1.63
PRP11	YDL043C	ATG36	P46983	293 aa		4.87	□□□□□ -1.63
PRP11	YDL043C	YNR065C	P53751	1116 aa		4.87	□□□□□ -1.63
PRP11	YDL043C	EST2	Q06163	884 aa		4.87	□□□□□ -1.63
PRP11	YDL043C	EAF1	Q06337	982 aa		4.87	□□□□□ -1.63
PRP11	YDL043C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
PRP11	YDL043C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.86	□□□□□ -1.63
PRP11	YDL043C	TY1A-DR6	P0CX70	440 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	TY1A-ER1	P0CX71	440 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	TY1A-LR2	P0CX72	440 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	TY1A-PL	P0CX73	440 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	TY1A-JR1	P0CX74	440 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	TY1A-LR3	P0CX75	440 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	TY1A-ML2	P0CX76	440 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	INO1	P11986	533 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
PRP11	YDL043C	MOT2	P34909	587 aa	Known RBP	4.86	□□□□□ -1.63
PRP11	YDL043C	DEF1	P35732	738 aa	Known RBP	4.86	□□□□□ -1.63
PRP11	YDL043C	UBP12	P39538	1254 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	HUL4	P40985	892 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	FET4	P40988	552 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	LSB6	P42951	607 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	NAM8	Q00539	523 aa	Known RBP	4.86	□□□□□ -1.63
PRP11	YDL043C	TIF35	Q04067	274 aa	Known RBP	4.86	□□□□□ -1.63
PRP11	YDL043C	UTP5	Q04177	643 aa	Known RBP	4.86	□□□□□ -1.63
PRP11	YDL043C	TY1A-GR1	Q12085	440 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	RKM4	Q12504	494 aa		4.86	□□□□□ -1.63
PRP11	YDL043C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.86	□□□□□ -1.63
PRP11	YDL043C	TY1A-OL	Q92392	440 aa	Known RBP	4.86	□□□□□ -1.63
PRP11	YDL043C	NOP14	Q99207	810 aa	Known RBP	4.86	□□□□□ -1.63
PRP11	YDL043C	MRP10	O75012	95 aa		4.85	□□□□□ -1.63
PRP11	YDL043C	SRM1	P21827	482 aa		4.85	□□□□□ -1.63
PRP11	YDL043C	SYP1	P25623	870 aa	Known RBP	4.85	□□□□□ -1.63
PRP11	YDL043C	MSH2	P25847	964 aa		4.85	□□□□□ -1.63
PRP11	YDL043C	ADD66	P36040	267 aa		4.85	□□□□□ -1.63
PRP11	YDL043C	NEM1	P38757	446 aa		4.85	□□□□□ -1.63
PRP11	YDL043C	PRK1	P40494	810 aa		4.85	□□□□□ -1.63
PRP11	YDL043C	MTR4	P47047	1073 aa	Known RBP	4.85	□□□□□ -1.63
PRP11	YDL043C	YJR008W	P47085	338 aa		4.85	□□□□□ -1.63
PRP11	YDL043C	RTA1	P53047	317 aa		4.85	□□□□□ -1.63
PRP11	YDL043C	GUP1	P53154	560 aa		4.85	□□□□□ -1.63
PRP11	YDL043C	RTS3	P53289	263 aa		4.85	□□□□□ -1.63
PRP11	YDL043C	DNM1	P54861	757 aa		4.85	□□□□□ -1.63
PRP11	YDL043C	TAF8	Q03750	510 aa		4.85	□□□□□ -1.63
PRP11	YDL043C	DED1	P06634	604 aa	Known RBP	4.84	□□□□□ -1.63
PRP11	YDL043C	PRP9	P19736	530 aa	Known RBP	4.84	□□□□□ -1.63
PRP11	YDL043C	DBP5	P20449	482 aa	Known RBP	4.84	□□□□□ -1.63
PRP11	YDL043C	DIT1	P21623	536 aa		4.84	□□□□□ -1.63
PRP11	YDL043C	ARL1	P38116	183 aa	Known RBP	4.84	□□□□□ -1.63
PRP11	YDL043C	SNF7	P39929	240 aa	Known RBP	4.84	□□□□□ -1.63
PRP11	YDL043C	SLS1	P42900	643 aa		4.84	□□□□□ -1.63
PRP11	YDL043C	ALR2	P43553	858 aa		4.84	□□□□□ -1.63
PRP11	YDL043C	CNN1	P43618	361 aa		4.84	□□□□□ -1.63
PRP11	YDL043C	UTP22	P53254	1237 aa	Predicted RBP	4.84	□□□□□ -1.63
PRP11	YDL043C	YMR265C	Q03508	461 aa	Known RBP	4.84	□□□□□ -1.63
PRP11	YDL043C	HAS1	Q03532	505 aa	Known RBP	4.84	□□□□□ -1.63
PRP11	YDL043C	YIG1	Q08956	461 aa		4.84	□□□□□ -1.63
PRP11	YDL043C	YPR053C	Q6Q5F3	151 aa		4.84	□□□□□ -1.63
PRP11	YDL043C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
PRP11	YDL043C	YKL107W	P34251	309 aa		4.83	□□□□□ -1.64
PRP11	YDL043C	CRP1	P38845	465 aa	Known RBP	4.83	□□□□□ -1.64
PRP11	YDL043C	LEM3	P42838	414 aa		4.83	□□□□□ -1.64
PRP11	YDL043C	YGL176C	P46945	554 aa		4.83	□□□□□ -1.64
PRP11	YDL043C	RAT1	Q02792	1006 aa	Known RBP	4.83	□□□□□ -1.64
PRP11	YDL043C	RKM2	Q03942	479 aa		4.83	□□□□□ -1.64
PRP11	YDL043C	TY1A-DR2	Q03964	440 aa	Known RBP	4.83	□□□□□ -1.64
PRP11	YDL043C	NTG2	Q08214	380 aa		4.83	□□□□□ -1.64
PRP11	YDL043C	YPL066W	Q12194	479 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms