RNA–Protein interactions for RNA: YCR087W

YCR087W, Transcript of Dubious open reading frame, yeast

Gene YCR087W, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR087W	YCR087W	SRP54	P20424	541 aa	Known RBP	11.49	□□□□□ -0.57
YCR087W	YCR087W	YFL040W	P43562	540 aa		11.49	□□□□□ -0.57
YCR087W	YCR087W	BRE5	P53741	515 aa	Known RBP	11.49	□□□□□ -0.57
YCR087W	YCR087W	MAM3	Q12296	706 aa		11.49	□□□□□ -0.57
YCR087W	YCR087W	MDM20	Q12387	796 aa	Known RBP	11.49	□□□□□ -0.57
YCR087W	YCR087W	TFC4	P33339	1025 aa		11.48	□□□□□ -0.57
YCR087W	YCR087W	SHP1	P34223	423 aa		11.48	□□□□□ -0.57
YCR087W	YCR087W	OPY1	P38271	328 aa		11.48	□□□□□ -0.57
YCR087W	YCR087W	YKE2	P52553	114 aa		11.48	□□□□□ -0.57
YCR087W	YCR087W	HUL5	P53119	910 aa		11.48	□□□□□ -0.57
YCR087W	YCR087W	YDR341C	Q05506	607 aa	Known RBP	11.48	□□□□□ -0.57
YCR087W	YCR087W	SUE1	Q06524	206 aa		11.48	□□□□□ -0.57
YCR087W	YCR087W	TKL1	P23254	680 aa	Known RBP	11.47	□□□□□ -0.57
YCR087W	YCR087W	SAS3	P34218	831 aa		11.47	□□□□□ -0.57
YCR087W	YCR087W	UIP5	P36137	443 aa		11.47	□□□□□ -0.57
YCR087W	YCR087W	UBP10	P53874	792 aa	Predicted RBP	11.47	□□□□□ -0.57
YCR087W	YCR087W	FMP30	Q02883	468 aa		11.47	□□□□□ -0.57
YCR087W	YCR087W	ERP3	Q12403	225 aa		11.47	□□□□□ -0.57
YCR087W	YCR087W	FBP26	P32604	452 aa		11.46	□□□□□ -0.57
YCR087W	YCR087W	WHI3	P34761	661 aa	Known RBP	11.46	□□□□□ -0.57
YCR087W	YCR087W	ECM30	Q06673	1274 aa		11.46	□□□□□ -0.57
YCR087W	YCR087W	ISA1	Q07821	250 aa	Predicted RBP	11.46	□□□□□ -0.57
YCR087W	YCR087W	RNR2	P09938	399 aa	Known RBP	11.45	□□□□□ -0.58
YCR087W	YCR087W	KSP1	P38691	1029 aa	Known RBP	11.45	□□□□□ -0.58
YCR087W	YCR087W	AIM9	P40053	627 aa	Known RBP	11.45	□□□□□ -0.58
YCR087W	YCR087W	VID28	P40547	921 aa		11.45	□□□□□ -0.58
YCR087W	YCR087W	GDE1	Q02979	1223 aa		11.45	□□□□□ -0.58
YCR087W	YCR087W	PDC1	P06169	563 aa	Known RBP	11.44	□□□□□ -0.58
YCR087W	YCR087W	MATALPHA2	P0CY08	210 aa		11.44	□□□□□ -0.58
YCR087W	YCR087W	HMLALPHA2	P0CY09	210 aa		11.44	□□□□□ -0.58
YCR087W	YCR087W	BMH2	P34730	273 aa	Known RBP	11.44	□□□□□ -0.58
YCR087W	YCR087W	REG2	P38232	338 aa		11.44	□□□□□ -0.58
YCR087W	YCR087W	AKR1	P39010	764 aa		11.44	□□□□□ -0.58
YCR087W	YCR087W	NOC2	P39744	710 aa	Known RBP	11.44	□□□□□ -0.58
YCR087W	YCR087W	TRM11	Q12463	433 aa		11.44	□□□□□ -0.58
YCR087W	YCR087W	RPL17A	P05740	184 aa	Known RBP	11.43	□□□□□ -0.58
YCR087W	YCR087W	MAK11	P20484	414 aa	Known RBP	11.43	□□□□□ -0.58
YCR087W	YCR087W	CCT3	P39077	534 aa	Known RBP	11.43	□□□□□ -0.58
YCR087W	YCR087W	RPL17B	P46990	184 aa	Known RBP	11.43	□□□□□ -0.58
YCR087W	YCR087W	YPL034W	Q03083	165 aa		11.43	□□□□□ -0.58
YCR087W	YCR087W	POX1	P13711	748 aa		11.42	□□□□□ -0.58
YCR087W	YCR087W	SNA3	P14359	133 aa		11.42	□□□□□ -0.58
YCR087W	YCR087W	DBP1	P24784	617 aa	Known RBP	11.42	□□□□□ -0.58
YCR087W	YCR087W	YUR1	P26725	428 aa		11.42	□□□□□ -0.58
YCR087W	YCR087W	FIR1	P40020	876 aa		11.42	□□□□□ -0.58
YCR087W	YCR087W	BNI5	P53890	448 aa	Known RBP	11.42	□□□□□ -0.58
YCR087W	YCR087W	PTA1	Q01329	785 aa	Predicted RBP	11.42	□□□□□ -0.58
YCR087W	YCR087W	RPC31	P17890	251 aa		11.41	□□□□□ -0.58
YCR087W	YCR087W	SRO9	P25567	434 aa	Known RBP	11.41	□□□□□ -0.58
YCR087W	YCR087W	UGA4	P32837	571 aa		11.41	□□□□□ -0.58
YCR087W	YCR087W	RXT2	P38255	430 aa		11.41	□□□□□ -0.58
YCR087W	YCR087W	PAN5	P38787	379 aa		11.41	□□□□□ -0.58
YCR087W	YCR087W	NDT80	P38830	627 aa		11.41	□□□□□ -0.58
YCR087W	YCR087W	SKP2	P42843	763 aa		11.41	□□□□□ -0.58
YCR087W	YCR087W	CEX1	Q12453	761 aa		11.41	□□□□□ -0.58
YCR087W	YCR087W	RTP1	Q12751	981 aa		11.41	□□□□□ -0.58
YCR087W	YCR087W	MET6	P05694	767 aa	Known RBP	11.4	□□□□□ -0.58
YCR087W	YCR087W	TRL1	P09880	827 aa	Known RBP	11.4	□□□□□ -0.58
YCR087W	YCR087W	HCA4	P20448	770 aa	Known RBP	11.4	□□□□□ -0.58
YCR087W	YCR087W	CLB5	P30283	435 aa		11.4	□□□□□ -0.58
YCR087W	YCR087W	ASF1	P32447	279 aa		11.4	□□□□□ -0.58
YCR087W	YCR087W	BCS1	P32839	456 aa		11.4	□□□□□ -0.58
YCR087W	YCR087W	SUL1	P38359	859 aa		11.4	□□□□□ -0.58
YCR087W	YCR087W	AFG3	P39925	761 aa		11.4	□□□□□ -0.58
YCR087W	YCR087W	BUD6	P41697	788 aa		11.4	□□□□□ -0.58
YCR087W	YCR087W	ASE1	P50275	885 aa		11.4	□□□□□ -0.58
YCR087W	YCR087W	NAF1	P53919	492 aa	Known RBP	11.4	□□□□□ -0.58
YCR087W	YCR087W	ECM23	Q02710	187 aa		11.4	□□□□□ -0.58
YCR087W	YCR087W	EAR1	Q03212	550 aa		11.4	□□□□□ -0.58
YCR087W	YCR087W	OYE2	Q03558	400 aa	Known RBP	11.4	□□□□□ -0.58
YCR087W	YCR087W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.39	□□□□□ -0.59	not detected
YCR087W	YCR087W	DBP7	P36120	742 aa	Known RBP	11.39	□□□□□ -0.59
YCR087W	YCR087W	YHL017W	P38745	532 aa		11.39	□□□□□ -0.59
YCR087W	YCR087W	HMF1	P40037	129 aa	Known RBP	11.39	□□□□□ -0.59
YCR087W	YCR087W	EPL1	P43572	832 aa		11.39	□□□□□ -0.59
YCR087W	YCR087W	CLA4	P48562	842 aa		11.39	□□□□□ -0.59
YCR087W	YCR087W	YGL039W	P53183	348 aa	Known RBP	11.39	□□□□□ -0.59
YCR087W	YCR087W	DAK1	P54838	584 aa	Known RBP	11.39	□□□□□ -0.59
YCR087W	YCR087W	CSM3	Q04659	317 aa		11.39	□□□□□ -0.59
YCR087W	YCR087W	YMR321C	Q04898	105 aa		11.39	□□□□□ -0.59
YCR087W	YCR087W	SVF1	Q05515	481 aa		11.39	□□□□□ -0.59
YCR087W	YCR087W	PSK2	Q08217	1101 aa		11.39	□□□□□ -0.59
YCR087W	YCR087W	YLL058W	Q12198	575 aa		11.39	□□□□□ -0.59
YCR087W	YCR087W	VPS13	Q07878	3144 aa		11.39	□□□□□ -0.59
YCR087W	YCR087W	HEM1	P09950	548 aa	Predicted RBP	11.38	□□□□□ -0.59
YCR087W	YCR087W	UBP15	P50101	1230 aa		11.38	□□□□□ -0.59
YCR087W	YCR087W	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.37	□□□□□ -0.59	not detected
YCR087W	YCR087W	SWI4	P25302	1093 aa	Known RBP	11.37	□□□□□ -0.59
YCR087W	YCR087W	PCI8	P40512	444 aa		11.37	□□□□□ -0.59
YCR087W	YCR087W	CNM67	P53865	581 aa	Known RBP	11.37	□□□□□ -0.59
YCR087W	YCR087W	YML020W	Q03722	664 aa		11.37	□□□□□ -0.59
YCR087W	YCR087W	SMD2	Q06217	110 aa	Known RBP	11.37	□□□□□ -0.59
YCR087W	YCR087W	OXR1	Q08952	273 aa		11.37	□□□□□ -0.59
YCR087W	YCR087W	YDR461C-A	Q2V2P7	80 aa		11.37	□□□□□ -0.59
YCR087W	YCR087W	CBP3	P21560	335 aa		11.36	□□□□□ -0.59
YCR087W	YCR087W	ISW1	P38144	1129 aa		11.36	□□□□□ -0.59
YCR087W	YCR087W	RPN10	P38886	268 aa	Known RBP	11.36	□□□□□ -0.59
YCR087W	YCR087W	YGL138C	P53122	345 aa		11.36	□□□□□ -0.59
YCR087W	YCR087W	MDR1	P53258	950 aa		11.36	□□□□□ -0.59
YCR087W	YCR087W	AFT1	P22149	690 aa		11.35	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms