RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C TSA1P34760 196 aaKnown RBP4.43□□□□□ -1.7
SRD1YCR018C OCA5P38738 679 aa4.43□□□□□ -1.7
SRD1YCR018C PEX28P38848 579 aa4.43□□□□□ -1.7
SRD1YCR018C PIC2P40035 300 aa4.43□□□□□ -1.7
SRD1YCR018C NEO1P40527 1151 aa4.43□□□□□ -1.7
SRD1YCR018C FET4P40988 552 aa4.43□□□□□ -1.7
SRD1YCR018C YNR065CP53751 1116 aa4.43□□□□□ -1.7
SRD1YCR018C MRL1Q06815 381 aa4.43□□□□□ -1.7
SRD1YCR018C YTA7P40340 1379 aa4.42□□□□□ -1.7
SRD1YCR018C CDC34P14682 295 aa4.42□□□□□ -1.7
SRD1YCR018C MSH3P25336 1018 aa4.42□□□□□ -1.7
SRD1YCR018C THI80P35202 319 aa4.42□□□□□ -1.7
SRD1YCR018C XKS1P42826 600 aa4.42□□□□□ -1.7
SRD1YCR018C RTT10Q08924 1013 aa4.42□□□□□ -1.7
SRD1YCR018C GCR1P07261 785 aa4.41□□□□□ -1.7
SRD1YCR018C PRP5P21372 849 aaPredicted RBP4.41□□□□□ -1.7
SRD1YCR018C HSP78P33416 811 aa4.41□□□□□ -1.7
SRD1YCR018C ATG14P38270 344 aa4.41□□□□□ -1.7
SRD1YCR018C NOG1Q02892 647 aaKnown RBP4.41□□□□□ -1.7
SRD1YCR018C TMA46Q12000 345 aaKnown RBP4.41□□□□□ -1.7
SRD1YCR018C WHI3P34761 661 aaKnown RBP4.4□□□□□ -1.71
SRD1YCR018C MMM1P41800 426 aa4.4□□□□□ -1.71
SRD1YCR018C FAA4P47912 694 aaKnown RBP4.4□□□□□ -1.71
SRD1YCR018C YGL140CP53120 1219 aa4.4□□□□□ -1.71
SRD1YCR018C NSI1Q12457 570 aa4.4□□□□□ -1.71
SRD1YCR018C YOL098CQ12496 1037 aa4.4□□□□□ -1.71
SRD1YCR018C HTS1P07263 546 aaKnown RBP4.39□□□□□ -1.71
SRD1YCR018C HVG1P0CE11 249 aa4.39□□□□□ -1.71
SRD1YCR018C TAF13P11747 167 aa4.39□□□□□ -1.71
SRD1YCR018C SRP40P32583 406 aaPredicted RBP4.39□□□□□ -1.71
SRD1YCR018C KRI1P42846 591 aaKnown RBP4.39□□□□□ -1.71
SRD1YCR018C CIT3P43635 486 aa4.39□□□□□ -1.71
SRD1YCR018C MTR4P47047 1073 aaKnown RBP4.39□□□□□ -1.71
SRD1YCR018C YJL049WP47048 450 aa4.39□□□□□ -1.71
SRD1YCR018C UTP22P53254 1237 aaPredicted RBP4.39□□□□□ -1.71
SRD1YCR018C SSF2Q12153 453 aaPredicted RBP4.39□□□□□ -1.71
SRD1YCR018C SEC23P15303 768 aaKnown RBP4.38□□□□□ -1.71
SRD1YCR018C PRI2P20457 528 aa4.38□□□□□ -1.71
SRD1YCR018C VMA4P22203 233 aaKnown RBP4.38□□□□□ -1.71
SRD1YCR018C HAS1Q03532 505 aaKnown RBP4.38□□□□□ -1.71
SRD1YCR018C FPR4Q06205 392 aaPredicted RBP4.38□□□□□ -1.71
SRD1YCR018C HDA2Q06629 674 aa4.38□□□□□ -1.71
SRD1YCR018C FAL1Q12099 399 aaKnown RBP4.38□□□□□ -1.71
SRD1YCR018C FLR1P38124 548 aa4.37□□□□□ -1.71
SRD1YCR018C EXO5P38289 585 aa4.37□□□□□ -1.71
SRD1YCR018C YGR053CP53234 283 aa4.37□□□□□ -1.71
SRD1YCR018C YMR074CQ04773 145 aa4.37□□□□□ -1.71
SRD1YCR018C TDA5Q06417 326 aaKnown RBP4.37□□□□□ -1.71
SRD1YCR018C OPI10Q08202 246 aa4.37□□□□□ -1.71
SRD1YCR018C DED1P06634 604 aaKnown RBP4.36□□□□□ -1.71
SRD1YCR018C BAS1P22035 811 aa4.36□□□□□ -1.71
SRD1YCR018C DUT1P33317 147 aa4.36□□□□□ -1.71
SRD1YCR018C RCM1P53972 490 aa4.36□□□□□ -1.71
SRD1YCR018C SPO20Q04359 397 aa4.36□□□□□ -1.71
SRD1YCR018C YIG1Q08956 461 aa4.36□□□□□ -1.71
SRD1YCR018C YLL054CQ12244 843 aa4.36□□□□□ -1.71
SRD1YCR018C YOR131CQ12486 218 aa4.36□□□□□ -1.71
SRD1YCR018C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SRD1YCR018C GRX1P25373 110 aaKnown RBP4.35□□□□□ -1.71
SRD1YCR018C YKL091CP33324 310 aaKnown RBP4.35□□□□□ -1.71
SRD1YCR018C ENT3P47160 408 aa4.35□□□□□ -1.71
SRD1YCR018C FAR11P53917 953 aa4.35□□□□□ -1.71
SRD1YCR018C SIW14P53965 281 aa4.35□□□□□ -1.71
SRD1YCR018C EST2Q06163 884 aa4.35□□□□□ -1.71
SRD1YCR018C CDC53Q12018 815 aaKnown RBP4.35□□□□□ -1.71
SRD1YCR018C TY1A-LR4P0C2I8 440 aaKnown RBP4.34□□□□□ -1.71
SRD1YCR018C TY1A-DR6P0CX70 440 aa4.34□□□□□ -1.71
SRD1YCR018C TY1A-ER1P0CX71 440 aa4.34□□□□□ -1.71
SRD1YCR018C TY1A-LR2P0CX72 440 aa4.34□□□□□ -1.71
SRD1YCR018C TY1A-PLP0CX73 440 aa4.34□□□□□ -1.71
SRD1YCR018C TY1A-JR1P0CX74 440 aa4.34□□□□□ -1.71
SRD1YCR018C TY1A-LR3P0CX75 440 aa4.34□□□□□ -1.71
SRD1YCR018C TY1A-ML2P0CX76 440 aa4.34□□□□□ -1.71
SRD1YCR018C STI1P15705 589 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
SRD1YCR018C PRP6P19735 899 aaPredicted RBP4.34□□□□□ -1.71
SRD1YCR018C ADD66P36040 267 aa4.34□□□□□ -1.71
SRD1YCR018C GPT2P36148 743 aa4.34□□□□□ -1.71
SRD1YCR018C ARL1P38116 183 aaKnown RBP4.34□□□□□ -1.71
SRD1YCR018C REI1P38344 393 aaPredicted RBP4.34□□□□□ -1.71
SRD1YCR018C SLS1P42900 643 aa4.34□□□□□ -1.71
SRD1YCR018C OSW7P43611 510 aa4.34□□□□□ -1.71
SRD1YCR018C GCV1P48015 400 aa4.34□□□□□ -1.71
SRD1YCR018C TYW3P53177 273 aa4.34□□□□□ -1.71
SRD1YCR018C YNR063WP53749 607 aa4.34□□□□□ -1.71
SRD1YCR018C MEC3Q02574 474 aa4.34□□□□□ -1.71
SRD1YCR018C ROD1Q02805 837 aa4.34□□□□□ -1.71
SRD1YCR018C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
SRD1YCR018C NSE3Q05541 303 aa4.34□□□□□ -1.71
SRD1YCR018C AVO1Q08236 1176 aa4.34□□□□□ -1.71
SRD1YCR018C YOR059CQ08448 450 aaKnown RBP4.34□□□□□ -1.71
SRD1YCR018C YOR223WQ12015 292 aa4.34□□□□□ -1.71
SRD1YCR018C TY1A-GR1Q12085 440 aa4.34□□□□□ -1.71
SRD1YCR018C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.34□□□□□ -1.71
SRD1YCR018C TY1A-OLQ92392 440 aaKnown RBP4.34□□□□□ -1.71
SRD1YCR018C HEM13P11353 328 aaKnown RBP4.33□□□□□ -1.72
SRD1YCR018C LYP1P32487 611 aa4.33□□□□□ -1.72
SRD1YCR018C RER2P35196 286 aa4.33□□□□□ -1.72
SRD1YCR018C RDH54P38086 958 aa4.33□□□□□ -1.72
SRD1YCR018C NEM1P38757 446 aa4.33□□□□□ -1.72
SRD1YCR018C OYE3P41816 400 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 89.1 ms