RNA–Protein interactions for RNA: YBR231C

SWC5, Transcript of Component of the SWR1 complex, yeastyeast

Gene SWC5, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC5YBR231C MSP1P28737 362 aa12.15□□□□□ -0.46
SWC5YBR231C APE3P37302 537 aaKnown RBP12.15□□□□□ -0.46
SWC5YBR231C ASE1P50275 885 aa12.15□□□□□ -0.46
SWC5YBR231C YGL081WP53156 320 aa12.15□□□□□ -0.46
SWC5YBR231C RET3P53600 189 aa12.15□□□□□ -0.46
SWC5YBR231C YAF9P53930 226 aa12.15□□□□□ -0.46
SWC5YBR231C COG8Q04632 607 aa12.15□□□□□ -0.46
SWC5YBR231C SUE1Q06524 206 aa12.15□□□□□ -0.46
SWC5YBR231C TIP41Q12199 356 aa12.15□□□□□ -0.46
SWC5YBR231C PWP2P25635 923 aaKnown RBP12.14□□□□□ -0.47
SWC5YBR231C ELM1P32801 640 aa12.14□□□□□ -0.47
SWC5YBR231C GPB2P39717 880 aa12.14□□□□□ -0.47
SWC5YBR231C DJP1P40564 432 aa12.14□□□□□ -0.47
SWC5YBR231C NBL1Q3E7Y6 73 aa12.14□□□□□ -0.47
SWC5YBR231C AIM44Q99299 758 aa12.14□□□□□ -0.47
SWC5YBR231C VPS1P21576 704 aaKnown RBP12.13□□□□□ -0.47
SWC5YBR231C MBR1P23493 339 aa12.13□□□□□ -0.47
SWC5YBR231C SRO9P25567 434 aaKnown RBP12.13□□□□□ -0.47
SWC5YBR231C TGL1P34163 548 aa12.13□□□□□ -0.47
SWC5YBR231C MOT2P34909 587 aaKnown RBP12.13□□□□□ -0.47
SWC5YBR231C FMS1P50264 508 aa12.13□□□□□ -0.47
SWC5YBR231C BNI5P53890 448 aaKnown RBP12.13□□□□□ -0.47
SWC5YBR231C JIP4Q03361 876 aa12.13□□□□□ -0.47
SWC5YBR231C GIS4Q04233 774 aa12.13□□□□□ -0.47
SWC5YBR231C TIF6Q12522 245 aaKnown RBP12.13□□□□□ -0.47
SWC5YBR231C THR4P16120 514 aaKnown RBP12.12□□□□□ -0.47
SWC5YBR231C CDC60P26637 1090 aaKnown RBP12.12□□□□□ -0.47
SWC5YBR231C RFT1P38206 574 aaPredicted RBP12.12□□□□□ -0.47
SWC5YBR231C ERG7P38604 731 aa12.12□□□□□ -0.47
SWC5YBR231C PAN5P38787 379 aa12.12□□□□□ -0.47
SWC5YBR231C SPR3P41901 512 aa12.12□□□□□ -0.47
SWC5YBR231C CIR1P42940 261 aa12.12□□□□□ -0.47
SWC5YBR231C CSC1Q06538 782 aa12.12□□□□□ -0.47
SWC5YBR231C GUD1Q07729 489 aa12.12□□□□□ -0.47
SWC5YBR231C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.12□□□□□ -0.47not detected
SWC5YBR231C VMA2P16140 517 aaKnown RBP12.11□□□□□ -0.47
SWC5YBR231C ALG1P16661 449 aa12.11□□□□□ -0.47
SWC5YBR231C RTC4P53850 401 aa12.11□□□□□ -0.47
SWC5YBR231C TMA64Q04600 565 aaKnown RBP12.11□□□□□ -0.47
SWC5YBR231C SPH1Q06160 661 aa12.11□□□□□ -0.47
SWC5YBR231C YOR296WQ08748 1289 aa12.11□□□□□ -0.47
SWC5YBR231C TY3A-GQ12173 290 aa12.11□□□□□ -0.47
SWC5YBR231C TY3A-IQ99219 290 aa12.11□□□□□ -0.47
SWC5YBR231C FKS1P38631 1876 aaKnown RBP12.1□□□□□ -0.47
SWC5YBR231C HXK1P04806 485 aaKnown RBP12.1□□□□□ -0.47
SWC5YBR231C MCM3P24279 971 aaKnown RBP12.1□□□□□ -0.47
SWC5YBR231C PKC1P24583 1151 aa12.1□□□□□ -0.47
SWC5YBR231C UGA4P32837 571 aa12.1□□□□□ -0.47
SWC5YBR231C ASH1P34233 588 aa12.1□□□□□ -0.47
SWC5YBR231C CSM3Q04659 317 aa12.1□□□□□ -0.47
SWC5YBR231C SMD2Q06217 110 aaKnown RBP12.1□□□□□ -0.47
SWC5YBR231C ETT1Q08421 412 aaKnown RBP12.1□□□□□ -0.47
SWC5YBR231C CDC19P00549 500 aaKnown RBP12.09□□□□□ -0.47
SWC5YBR231C RGP1P16664 663 aa12.09□□□□□ -0.47
SWC5YBR231C ROX1P25042 368 aa12.09□□□□□ -0.47
SWC5YBR231C IXR1P33417 597 aa12.09□□□□□ -0.47
SWC5YBR231C SNF7P39929 240 aaKnown RBP12.09□□□□□ -0.47
SWC5YBR231C CCT5P40413 562 aaKnown RBP12.09□□□□□ -0.47
SWC5YBR231C LIF1P53150 421 aa12.09□□□□□ -0.47
SWC5YBR231C DSE4P53753 1117 aa12.09□□□□□ -0.47
SWC5YBR231C SRF1Q12516 437 aa12.09□□□□□ -0.47
SWC5YBR231C TY1B-AO13527 1196 aaKnown RBP12.08□□□□□ -0.48
SWC5YBR231C SAM1P10659 382 aaKnown RBP12.08□□□□□ -0.48
SWC5YBR231C EUG1P32474 517 aa12.08□□□□□ -0.48
SWC5YBR231C SUL1P38359 859 aa12.08□□□□□ -0.48
SWC5YBR231C NDT80P38830 627 aa12.08□□□□□ -0.48
SWC5YBR231C STT3P39007 718 aaKnown RBP12.08□□□□□ -0.48
SWC5YBR231C RSM25P40496 264 aa12.08□□□□□ -0.48
SWC5YBR231C YGR125WP53273 1036 aa12.08□□□□□ -0.48
SWC5YBR231C OYE2Q03558 400 aaKnown RBP12.08□□□□□ -0.48
SWC5YBR231C DDP1Q99321 188 aaKnown RBP12.08□□□□□ -0.48
SWC5YBR231C RPL22AP05749 121 aaKnown RBP12.07□□□□□ -0.48
SWC5YBR231C URA1P28272 314 aaPredicted RBP12.07□□□□□ -0.48
SWC5YBR231C UTR4P32626 227 aa12.07□□□□□ -0.48
SWC5YBR231C CUE3P53137 624 aaKnown RBP12.07□□□□□ -0.48
SWC5YBR231C TRS120Q04183 1289 aa12.07□□□□□ -0.48
SWC5YBR231C SLK19Q08581 821 aaKnown RBP12.07□□□□□ -0.48
SWC5YBR231C PTC5Q12511 572 aa12.07□□□□□ -0.48
SWC5YBR231C PHR1P05066 565 aaKnown RBP RIP-Chip data12.06□□□□□ -0.48not detected
SWC5YBR231C SES1P07284 462 aaKnown RBP12.06□□□□□ -0.48
SWC5YBR231C FRS2P15625 503 aaKnown RBP12.06□□□□□ -0.48
SWC5YBR231C MCR1P36060 302 aaKnown RBP12.06□□□□□ -0.48
SWC5YBR231C CIT3P43635 486 aa12.06□□□□□ -0.48
SWC5YBR231C YGR153WP48238 217 aa12.06□□□□□ -0.48
SWC5YBR231C MFM1Q02783 413 aa12.06□□□□□ -0.48
SWC5YBR231C DUS1P53759 423 aaKnown RBP12.05□□□□□ -0.48
SWC5YBR231C EIS1Q05050 843 aaKnown RBP12.05□□□□□ -0.48
SWC5YBR231C MMR1Q06324 491 aa12.05□□□□□ -0.48
SWC5YBR231C BMH1P29311 267 aaKnown RBP12.04□□□□□ -0.48
SWC5YBR231C GAA1P39012 614 aa12.04□□□□□ -0.48
SWC5YBR231C RVS167P39743 482 aaKnown RBP12.04□□□□□ -0.48
SWC5YBR231C DAK2P43550 591 aa12.04□□□□□ -0.48
SWC5YBR231C PTA1Q01329 785 aaPredicted RBP12.04□□□□□ -0.48
SWC5YBR231C BUL2Q03758 920 aaKnown RBP12.04□□□□□ -0.48
SWC5YBR231C AIM33Q04516 312 aa12.04□□□□□ -0.48
SWC5YBR231C YLR225CQ05948 407 aaKnown RBP12.04□□□□□ -0.48
SWC5YBR231C DUS3Q06053 668 aaKnown RBP12.04□□□□□ -0.48
SWC5YBR231C ISA1Q07821 250 aaPredicted RBP12.04□□□□□ -0.48
SWC5YBR231C YKT6P36015 200 aaKnown RBP12.03□□□□□ -0.48
SWC5YBR231C ARL1P38116 183 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms