RNA–Protein interactions for RNA: YAR042W

SWH1, Transcript of Protein similar to mammalian oxysterol-binding protein, yeast

Gene SWH1, Length 3,567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWH1	YAR042W	YHL050C	P38721	697 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	TRS85	P46944	698 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	FYV8	P46949	817 aa	Known RBP	4.18	□□□□□ -1.74
SWH1	YAR042W	DPH6	Q12429	685 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	NGR1	P32831	672 aa	Known RBP	4.18	□□□□□ -1.74
SWH1	YAR042W	IRC8	P47046	822 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	ALD2	P47771	506 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	CUE3	P53137	624 aa	Known RBP	4.18	□□□□□ -1.74
SWH1	YAR042W	BOP3	P53958	396 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	STE23	Q06010	1027 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	RRP6	Q12149	733 aa	Known RBP	4.18	□□□□□ -1.74
SWH1	YAR042W	CDC37	P06101	506 aa	Known RBP	4.17	□□□□□ -1.74
SWH1	YAR042W	MTF2	P10849	440 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	PUP2	P32379	260 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	YME2	P32843	850 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	HDA1	P53973	706 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	TY4A-H	Q6Q5P6	413 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	RPS6A	P0CX37	236 aa	Known RBP	4.17	□□□□□ -1.74
SWH1	YAR042W	RPS6B	P0CX38	236 aa	Predicted RBP	4.17	□□□□□ -1.74
SWH1	YAR042W	SIT4	P20604	311 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	NFU1	P32860	256 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	ATG3	P40344	310 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	LYS4	P49367	693 aa	Predicted RBP	4.17	□□□□□ -1.74
SWH1	YAR042W	HUL5	P53119	910 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	RPS15	Q01855	142 aa	Known RBP	4.17	□□□□□ -1.74
SWH1	YAR042W	EIS1	Q05050	843 aa	Known RBP	4.17	□□□□□ -1.74
SWH1	YAR042W	INM2	Q05533	292 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	EST2	Q06163	884 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	FKS1	P38631	1876 aa	Known RBP	4.17	□□□□□ -1.74
SWH1	YAR042W	CDC6	P09119	513 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	MAK11	P20484	414 aa	Known RBP	4.17	□□□□□ -1.74
SWH1	YAR042W	DIT2	P21595	489 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	ARG1	P22768	420 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	KRE2	P27809	442 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	YET1	P35723	206 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	YMR124W	P39523	943 aa	Known RBP	4.17	□□□□□ -1.74
SWH1	YAR042W	IRC4	Q03036	179 aa		4.17	□□□□□ -1.74
SWH1	YAR042W	CMS1	Q07897	291 aa	Known RBP	4.17	□□□□□ -1.74
SWH1	YAR042W	SWI4	P25302	1093 aa	Known RBP	4.16	□□□□□ -1.74
SWH1	YAR042W	GLN1	P32288	370 aa	Known RBP	4.16	□□□□□ -1.74
SWH1	YAR042W	DPH5	P32469	300 aa	Predicted RBP	4.16	□□□□□ -1.74
SWH1	YAR042W	BMH2	P34730	273 aa	Known RBP	4.16	□□□□□ -1.74
SWH1	YAR042W	YKR018C	P36114	725 aa		4.16	□□□□□ -1.74
SWH1	YAR042W	SIP3	P38717	1229 aa		4.16	□□□□□ -1.74
SWH1	YAR042W	BUD16	P39988	312 aa		4.16	□□□□□ -1.74
SWH1	YAR042W	HOS4	P40480	1083 aa		4.16	□□□□□ -1.74
SWH1	YAR042W	PTK2	P47116	818 aa	Known RBP	4.16	□□□□□ -1.74
SWH1	YAR042W	MYO5	Q04439	1219 aa	Known RBP	4.16	□□□□□ -1.74
SWH1	YAR042W	YLR001C	Q07895	862 aa		4.16	□□□□□ -1.74
SWH1	YAR042W	RRI2	Q12348	645 aa		4.16	□□□□□ -1.74
SWH1	YAR042W	PTC5	Q12511	572 aa		4.16	□□□□□ -1.74
SWH1	YAR042W	CDC8	P00572	216 aa		4.16	□□□□□ -1.74
SWH1	YAR042W	KRS1	P15180	591 aa	Known RBP	4.16	□□□□□ -1.74
SWH1	YAR042W	URA1	P28272	314 aa	Predicted RBP	4.16	□□□□□ -1.74
SWH1	YAR042W	MCX1	P38323	520 aa	Predicted RBP	4.16	□□□□□ -1.74
SWH1	YAR042W	TPS3	P38426	1054 aa	Known RBP	4.16	□□□□□ -1.74
SWH1	YAR042W	CCC2	P38995	1004 aa		4.16	□□□□□ -1.74
SWH1	YAR042W	YLR287C	Q05881	355 aa		4.16	□□□□□ -1.74
SWH1	YAR042W	RIX7	Q07844	837 aa	Known RBP	4.16	□□□□□ -1.74
SWH1	YAR042W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SWH1	YAR042W	PMR1	P13586	950 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
SWH1	YAR042W	VPS1	P21576	704 aa	Known RBP	4.15	□□□□□ -1.74
SWH1	YAR042W	PAP1	P29468	568 aa	Known RBP	4.15	□□□□□ -1.74
SWH1	YAR042W	ASF1	P32447	279 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	SRB4	P32569	687 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	CNS1	P33313	385 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	SHM1	P37292	490 aa	Predicted RBP	4.15	□□□□□ -1.74
SWH1	YAR042W	RPG1	P38249	964 aa	Known RBP	4.15	□□□□□ -1.74
SWH1	YAR042W	EFM2	P38347	419 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	AKR1	P39010	764 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	TFC6	Q06339	672 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	SEC23	P15303	768 aa	Known RBP	4.15	□□□□□ -1.74
SWH1	YAR042W	PDB1	P32473	366 aa	Known RBP	4.15	□□□□□ -1.74
SWH1	YAR042W	OLA1	P38219	394 aa	Known RBP	4.15	□□□□□ -1.74
SWH1	YAR042W	YSW1	P38280	609 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	CTM1	P38818	585 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	YIR042C	P40586	236 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	ILM1	P47155	203 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	BDF2	Q07442	638 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	NUR1	Q12066	484 aa		4.15	□□□□□ -1.74
SWH1	YAR042W	MRPS28	P21771	286 aa		4.15	□□□□□ -1.75
SWH1	YAR042W	BUD31	P25337	157 aa	Predicted RBP	4.15	□□□□□ -1.75
SWH1	YAR042W	BMH1	P29311	267 aa	Known RBP	4.15	□□□□□ -1.75
SWH1	YAR042W	ANP1	P32629	500 aa		4.15	□□□□□ -1.75
SWH1	YAR042W	RPN10	P38886	268 aa	Known RBP	4.15	□□□□□ -1.75
SWH1	YAR042W	MRX1	P40050	688 aa		4.15	□□□□□ -1.75
SWH1	YAR042W	ERG5	P54781	538 aa		4.15	□□□□□ -1.75
SWH1	YAR042W	UTP5	Q04177	643 aa	Known RBP	4.15	□□□□□ -1.75
SWH1	YAR042W	CSC1	Q06538	782 aa		4.15	□□□□□ -1.75
SWH1	YAR042W	SPO12	P17123	173 aa		4.14	□□□□□ -1.75
SWH1	YAR042W	GAL11	P19659	1081 aa		4.14	□□□□□ -1.75
SWH1	YAR042W	RTS1	P38903	757 aa		4.14	□□□□□ -1.75
SWH1	YAR042W	SHQ1	P40486	507 aa	Predicted RBP	4.14	□□□□□ -1.75
SWH1	YAR042W	NSG2	P53898	299 aa		4.14	□□□□□ -1.75
SWH1	YAR042W	SEC5	P89102	971 aa		4.14	□□□□□ -1.75
SWH1	YAR042W	VTC3	Q02725	835 aa		4.14	□□□□□ -1.75
SWH1	YAR042W	PSR2	Q07949	397 aa		4.14	□□□□□ -1.75
SWH1	YAR042W	HMI1	Q12039	706 aa		4.14	□□□□□ -1.75
SWH1	YAR042W	LOS1	P33418	1100 aa	Predicted RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms