RNA–Protein interactions for RNA: ENST00000641834.1

C19orf48-216, Transcript of chromosome 19 open reading frame 48, humanhuman

Gene C19orf48, Length 1,718 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-216ENST00000641834 KIF2CQ99661 725 aa21.98■■□□□ 1.11
C19orf48-216ENST00000641834 PTPRCP08575 1304 aa21.98■■□□□ 1.11
C19orf48-216ENST00000641834 HSP90AB2PQ58FF8 381 aa21.97■■□□□ 1.11
C19orf48-216ENST00000641834 FER1L4A9Z1Z3 1794 aa21.97■■□□□ 1.11
C19orf48-216ENST00000641834 HSCBQ8IWL3 235 aa21.97■■□□□ 1.11
C19orf48-216ENST00000641834 FLT4P35916 1363 aa21.97■■□□□ 1.11
C19orf48-216ENST00000641834 ANKARQ7Z5J8 1434 aa21.96■■□□□ 1.11
C19orf48-216ENST00000641834 ANKRD44Q8N8A2 993 aa21.96■■□□□ 1.11
C19orf48-216ENST00000641834 TBC1D9Q6ZT07 1266 aa21.95■■□□□ 1.1
C19orf48-216ENST00000641834 MAP3K19Q56UN5 1328 aa21.95■■□□□ 1.1
C19orf48-216ENST00000641834 FAM208AQ9UK61 1670 aaKnown RBP21.95■■□□□ 1.1
C19orf48-216ENST00000641834 MCM4P33991 863 aa21.94■■□□□ 1.1
C19orf48-216ENST00000641834 BRPF3Q9ULD4 1205 aa21.94■■□□□ 1.1
C19orf48-216ENST00000641834 CEP170BQ9Y4F5 1589 aaPredicted RBP21.94■■□□□ 1.1
C19orf48-216ENST00000641834 NWD1Q149M9 1564 aa21.94■■□□□ 1.1
C19orf48-216ENST00000641834 IGSF1Q8N6C5 1336 aa21.93■■□□□ 1.1
C19orf48-216ENST00000641834 RTL1A6NKG5 1358 aa21.93■■□□□ 1.1
C19orf48-216ENST00000641834 MCM10Q7L590 875 aa21.93■■□□□ 1.1
C19orf48-216ENST00000641834 RPAP2Q8IXW5 612 aaPredicted RBP21.93■■□□□ 1.1
C19orf48-216ENST00000641834 CACNA1FO60840 1977 aa21.93■■□□□ 1.1
C19orf48-216ENST00000641834 KRT24Q2M2I5 525 aa21.92■■□□□ 1.1
C19orf48-216ENST00000641834 PLEKHM2Q8IWE5 1019 aa21.92■■□□□ 1.1
C19orf48-216ENST00000641834 EID1Q9Y6B2 187 aa21.92■■□□□ 1.1
C19orf48-216ENST00000641834 MSH6P52701 1360 aa21.92■■□□□ 1.1
C19orf48-216ENST00000641834 CIZ1Q9ULV3 898 aaPredicted RBP21.92■■□□□ 1.1
C19orf48-216ENST00000641834 AMOTL2Q9Y2J4 779 aa21.92■■□□□ 1.1
C19orf48-216ENST00000641834 EIF5BO60841 1220 aaKnown RBP21.91■■□□□ 1.1
C19orf48-216ENST00000641834 CDC45O75419 566 aa21.91■■□□□ 1.1
C19orf48-216ENST00000641834 GSPT1P15170 499 aaKnown RBP21.91■■□□□ 1.1
C19orf48-216ENST00000641834 CEP85Q6P2H3 762 aa21.9■■□□□ 1.1
C19orf48-216ENST00000641834 SLC26A8Q96RN1 970 aa21.9■■□□□ 1.1
C19orf48-216ENST00000641834 TUBGCP6Q96RT7 1819 aa21.9■■□□□ 1.1
C19orf48-216ENST00000641834 TTC22Q5TAA0 569 aa21.89■■□□□ 1.09
C19orf48-216ENST00000641834 HTATSF1O43719 755 aaKnown RBP21.88■■□□□ 1.09
C19orf48-216ENST00000641834 MTHFSDQ2M296 383 aaKnown RBP21.88■■□□□ 1.09
C19orf48-216ENST00000641834 NUTM2FA1L443 756 aa21.86■■□□□ 1.09
C19orf48-216ENST00000641834 SPRYD3Q8NCJ5 442 aa21.86■■□□□ 1.09
C19orf48-216ENST00000641834 FSD2A1L4K1 749 aa21.85■■□□□ 1.09
C19orf48-216ENST00000641834 CEBPAP49715 358 aaPredicted RBP21.85■■□□□ 1.09
C19orf48-216ENST00000641834 GAS2L2Q8NHY3 880 aa21.85■■□□□ 1.09
C19orf48-216ENST00000641834 EYA1Q99502 592 aa21.84■■□□□ 1.09
C19orf48-216ENST00000641834 L1TD1Q5T7N2 865 aaKnown RBP21.83■■□□□ 1.09
C19orf48-216ENST00000641834 MEIS3Q99687 375 aa21.83■■□□□ 1.09
C19orf48-216ENST00000641834 SOS1Q07889 1333 aaPredicted RBP21.83■■□□□ 1.08
C19orf48-216ENST00000641834 FOXO3O43524 673 aa21.83■■□□□ 1.08
C19orf48-216ENST00000641834 DDX11L8A8MPP1 907 aa21.82■■□□□ 1.08
C19orf48-216ENST00000641834 CD2BP2O95400 341 aaKnown RBP21.81■■□□□ 1.08
C19orf48-216ENST00000641834 SLC4A2P04920 1241 aa21.81■■□□□ 1.08
C19orf48-216ENST00000641834 CCT4P50991 539 aaKnown RBP21.81■■□□□ 1.08
C19orf48-216ENST00000641834 RAB3GAP1Q15042 981 aa21.81■■□□□ 1.08
C19orf48-216ENST00000641834 THEMISQ8N1K5 641 aaPredicted RBP21.81■■□□□ 1.08
C19orf48-216ENST00000641834 PXDNLA1KZ92 1463 aa21.81■■□□□ 1.08
C19orf48-216ENST00000641834 PHRF1Q9P1Y6 1649 aaKnown RBP21.81■■□□□ 1.08
C19orf48-216ENST00000641834 K7ELQ4 463 aaPredicted RBP21.8■■□□□ 1.08
C19orf48-216ENST00000641834 TSPYL4Q9UJ04 414 aa21.8■■□□□ 1.08
C19orf48-216ENST00000641834 MED1Q15648 1581 aaPredicted RBP21.8■■□□□ 1.08
C19orf48-216ENST00000641834 NGDNQ8NEJ9 315 aaKnown RBP21.8■■□□□ 1.08
C19orf48-216ENST00000641834 RTF1Q92541 710 aaKnown RBP21.8■■□□□ 1.08
C19orf48-216ENST00000641834 BABAM1Q9NWV8 329 aa21.8■■□□□ 1.08
C19orf48-216ENST00000641834 CHD2O14647 1828 aaKnown RBP21.8■■□□□ 1.08
C19orf48-216ENST00000641834 LTN1O94822 1766 aa21.79■■□□□ 1.08
C19orf48-216ENST00000641834 OSBPL3Q9H4L5 887 aa21.79■■□□□ 1.08
C19orf48-216ENST00000641834 TRAK2O60296 914 aa21.78■■□□□ 1.08
C19orf48-216ENST00000641834 HSP90AB1P08238 724 aaKnown RBP21.78■■□□□ 1.08
C19orf48-216ENST00000641834 G2E3Q7L622 706 aa21.78■■□□□ 1.08
C19orf48-216ENST00000641834 C16orf71Q8IYS4 520 aaPredicted RBP21.78■■□□□ 1.08
C19orf48-216ENST00000641834 CLEC17AQ6ZS10 378 aa21.77■■□□□ 1.08
C19orf48-216ENST00000641834 OTUD7AQ8TE49 926 aaPredicted RBP21.77■■□□□ 1.08
C19orf48-216ENST00000641834 HOXC9P31274 260 aa21.77■■□□□ 1.08
C19orf48-216ENST00000641834 AMPHP49418 695 aa21.77■■□□□ 1.08
C19orf48-216ENST00000641834 RABEP1Q15276 862 aa21.77■■□□□ 1.08
C19orf48-216ENST00000641834 USP26Q9BXU7 913 aa21.77■■□□□ 1.08
C19orf48-216ENST00000641834 HMMRO75330 724 aa21.76■■□□□ 1.07
C19orf48-216ENST00000641834 TNPO1Q92973 898 aaKnown RBP21.76■■□□□ 1.07
C19orf48-216ENST00000641834 MIS18AQ9NYP9 233 aa21.76■■□□□ 1.07
C19orf48-216ENST00000641834 NFAT5O94916 1531 aa21.76■■□□□ 1.07
C19orf48-216ENST00000641834 MAP3K5Q99683 1374 aa21.75■■□□□ 1.07
C19orf48-216ENST00000641834 SDSP20132 328 aa21.75■■□□□ 1.07
C19orf48-216ENST00000641834 SALL3Q9BXA9 1300 aa21.75■■□□□ 1.07
C19orf48-216ENST00000641834 KDM3BQ7LBC6 1761 aa21.75■■□□□ 1.07
C19orf48-216ENST00000641834 SOX12O15370 315 aa21.75■■□□□ 1.07
C19orf48-216ENST00000641834 RBM42Q9BTD8 480 aaKnown RBP21.75■■□□□ 1.07
C19orf48-216ENST00000641834 ZNF142P52746 1687 aaPredicted RBP21.74■■□□□ 1.07
C19orf48-216ENST00000641834 GNAT3A8MTJ3 354 aa21.73■■□□□ 1.07
C19orf48-216ENST00000641834 PTMSP20962 102 aa21.72■■□□□ 1.07
C19orf48-216ENST00000641834 NLRP6P59044 892 aa21.72■■□□□ 1.07
C19orf48-216ENST00000641834 FAM43AQ8N2R8 423 aa21.72■■□□□ 1.07
C19orf48-216ENST00000641834 ISY1Q9ULR0 285 aaKnown RBP21.72■■□□□ 1.07
C19orf48-216ENST00000641834 LMO7Q8WWI1 1683 aa21.72■■□□□ 1.07
C19orf48-216ENST00000641834 KCNA6P17658 529 aa21.72■■□□□ 1.07
C19orf48-216ENST00000641834 GBP4Q96PP9 640 aa21.72■■□□□ 1.07
C19orf48-216ENST00000641834 RTN4Q9NQC3 1192 aaKnown RBP21.72■■□□□ 1.07
C19orf48-216ENST00000641834 GOLGA6L3A6NEY3 463 aa21.71■■□□□ 1.07
C19orf48-216ENST00000641834 F6X3S4 739 aa21.71■■□□□ 1.07
C19orf48-216ENST00000641834 SMARCA5O60264 1052 aaPredicted RBP21.71■■□□□ 1.07
C19orf48-216ENST00000641834 CCDC30Q5VVM6 783 aa21.71■■□□□ 1.07
C19orf48-216ENST00000641834 GNAI2P04899 355 aa21.7■■□□□ 1.06
C19orf48-216ENST00000641834 XRCC6P12956 609 aaKnown RBP eCLIP21.7■■□□□ 1.06
C19orf48-216ENST00000641834 FLIIQ13045 1269 aa21.7■■□□□ 1.06
C19orf48-216ENST00000641834 STK31Q9BXU1 1019 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms